Click here to switch to the map view.

The map label for this gene is pimA [H]

Identifier: 126454318

GI number: 126454318

Start: 3849699

End: 3850763

Strand: Direct

Name: pimA [H]

Synonym: BURPS1106A_3942

Alternate gene names: 126454318

Gene position: 3849699-3850763 (Clockwise)

Preceding gene: 126455246

Following gene: 126454592

Centisome position: 96.52

GC content: 65.54

Gene sequence:

>1065_bases
ATGCGCATCGCCCAAATCGCCCCGCTCTACGAAGCCGTCCCGCCCAAACTCTACGGGGGCACCGAGCGGGTCGTGTCCTA
CCTGACCGAGGCGCTCGTCGAAATGGGGCACGACGTCACGCTGTTCGCAAGCGGGGATTCCGTCACGTCGGCGCGCCTGG
AAGCCGCATGGCCGCGCGCGCTGCGCCTCGATCCGTCGATCCGCGACGCGATGGCGCCCCATATGCGCTTGCTCGAGCAG
GTCGCACGGGCCGCGCACACGTTCGACATCCTGCACTTCCACCTCGACTACCTGCCGTTCCCACTGCTGTCGCGCCTTGA
CGCGCCGTTCGTCACGACGCTGCACGGCCGCCTCGATCTGCCGGAGCTGCAGCCCGTGTTCGACGCGTTCCCGAACGCGC
CCGTCGTGTCGATCTCGGATTCGCAGCGCACGCCGCTGCCGCAAGCCGGATGGGCCGGCACCGTCTACCACGGGCTGCCC
GACACGCTGCTCGCGCCGCAAGCCGGCCGCAAGCCTGAATATCTCGCGTTTCTCGGCCGCATCTGCCCGGAAAAACGCGT
CGACACCGCAATCCGGATCGCCGCGCAAAGCGGCCTGCCGCTGAAGATTGCTGCGAAAGTCGACAAGGTCGACGAGGATT
ATTTCAAGGCCGAGATCGAACCGCTGCTCGATTCCGCGCACGTCGAGTTCATCGGCGAGATCAACGAAGCGCAGAAGCCC
GCCTTCCTGTCGGGCGCGAAGGCGCTGCTGTTTCCGATCGATTGGCCCGAGCCGTTCGGCCTCGTGATGATCGAGGCGAT
GGCATGCGGCACACCCGTCGTCGCGTTCAACCGCGGCTCCGTGCCGGAAGTCATCGATGACGGCCTGACGGGCTTCATCG
TCGAGGACGTACAGGGCGCGGTGGGCGCGCTGCACCGGATCGACGAATTGTCACGCGATGCAATTCGTGCGCAATTCGAG
CAACGTTTCAGCTCGCATGCAATGGCGCGGCGCTATATCGACATCTATGAAACGCTGCGCGACGCAACCAAGCAACCGCA
ATGGCAGCGCGTAGCGGCGGGTTAA

Upstream 100 bases:

>100_bases
ACCGCCCCGTCTGCCCGCCGGCAGGCGCTCACCGCTTACCGGAGCGAAGCTCGCACCGCCCCTCGGCGAGTTCCTCCCTC
TTCGCAACGGAGAAACGCTC

Downstream 100 bases:

>100_bases
CCCTTCGACCGGCGACATTGCGGAAATGACGCGCCCATTACGCTTTTCATAGCAGAAAGCCGCATCCGGAAATGCGGCTT
TCTTTTTGCCAAGCGGCGGA

Product: glycosyl transferase, group 1 family protein

Products: NA

Alternate protein names: Alpha-mannosyltransferase; Guanosine diphosphomannose-phosphatidyl-inositol alpha-mannosyltransferase; Phosphatidylinositol alpha-mannosyltransferase; PI alpha-mannosyltransferase [H]

Number of amino acids: Translated: 354; Mature: 354

Protein sequence:

>354_residues
MRIAQIAPLYEAVPPKLYGGTERVVSYLTEALVEMGHDVTLFASGDSVTSARLEAAWPRALRLDPSIRDAMAPHMRLLEQ
VARAAHTFDILHFHLDYLPFPLLSRLDAPFVTTLHGRLDLPELQPVFDAFPNAPVVSISDSQRTPLPQAGWAGTVYHGLP
DTLLAPQAGRKPEYLAFLGRICPEKRVDTAIRIAAQSGLPLKIAAKVDKVDEDYFKAEIEPLLDSAHVEFIGEINEAQKP
AFLSGAKALLFPIDWPEPFGLVMIEAMACGTPVVAFNRGSVPEVIDDGLTGFIVEDVQGAVGALHRIDELSRDAIRAQFE
QRFSSHAMARRYIDIYETLRDATKQPQWQRVAAG

Sequences:

>Translated_354_residues
MRIAQIAPLYEAVPPKLYGGTERVVSYLTEALVEMGHDVTLFASGDSVTSARLEAAWPRALRLDPSIRDAMAPHMRLLEQ
VARAAHTFDILHFHLDYLPFPLLSRLDAPFVTTLHGRLDLPELQPVFDAFPNAPVVSISDSQRTPLPQAGWAGTVYHGLP
DTLLAPQAGRKPEYLAFLGRICPEKRVDTAIRIAAQSGLPLKIAAKVDKVDEDYFKAEIEPLLDSAHVEFIGEINEAQKP
AFLSGAKALLFPIDWPEPFGLVMIEAMACGTPVVAFNRGSVPEVIDDGLTGFIVEDVQGAVGALHRIDELSRDAIRAQFE
QRFSSHAMARRYIDIYETLRDATKQPQWQRVAAG
>Mature_354_residues
MRIAQIAPLYEAVPPKLYGGTERVVSYLTEALVEMGHDVTLFASGDSVTSARLEAAWPRALRLDPSIRDAMAPHMRLLEQ
VARAAHTFDILHFHLDYLPFPLLSRLDAPFVTTLHGRLDLPELQPVFDAFPNAPVVSISDSQRTPLPQAGWAGTVYHGLP
DTLLAPQAGRKPEYLAFLGRICPEKRVDTAIRIAAQSGLPLKIAAKVDKVDEDYFKAEIEPLLDSAHVEFIGEINEAQKP
AFLSGAKALLFPIDWPEPFGLVMIEAMACGTPVVAFNRGSVPEVIDDGLTGFIVEDVQGAVGALHRIDELSRDAIRAQFE
QRFSSHAMARRYIDIYETLRDATKQPQWQRVAAG

Specific function: Catalyzes the addition of a mannose residue from GDP-D- mannose to the position 2 of a phosphatidyl-myo-inositol (PI) to generate a phosphatidyl-myo-inositol bearing an alpha-1,2-linked mannose residue (PIM1). Contrary to pimB, the mannosyltransferase pim

COG id: COG0438

COG function: function code M; Glycosyltransferase

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296 [H]

Pfam domain/function: PF00534 Glycos_transf_1 [H]

EC number: =2.4.1.57 [H]

Molecular weight: Translated: 39066; Mature: 39066

Theoretical pI: Translated: 5.25; Mature: 5.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIAQIAPLYEAVPPKLYGGTERVVSYLTEALVEMGHDVTLFASGDSVTSARLEAAWPRA
CCCHHHCHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHCCCCC
LRLDPSIRDAMAPHMRLLEQVARAAHTFDILHFHLDYLPFPLLSRLDAPFVTTLHGRLDL
EECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCEEEECCCCCC
PELQPVFDAFPNAPVVSISDSQRTPLPQAGWAGTVYHGLPDTLLAPQAGRKPEYLAFLGR
CCHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCHHCCCCCHHCCCCCCCCHHHHHHHHH
ICPEKRVDTAIRIAAQSGLPLKIAAKVDKVDEDYFKAEIEPLLDSAHVEFIGEINEAQKP
HCCHHHHHHHHHEEECCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
AFLSGAKALLFPIDWPEPFGLVMIEAMACGTPVVAFNRGSVPEVIDDGLTGFIVEDVQGA
HHHCCCCEEEEECCCCCCHHHHHHHHHHCCCCEEEECCCCCHHHHHCCCCHHHHHHHHHH
VGALHRIDELSRDAIRAQFEQRFSSHAMARRYIDIYETLRDATKQPQWQRVAAG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCC
>Mature Secondary Structure
MRIAQIAPLYEAVPPKLYGGTERVVSYLTEALVEMGHDVTLFASGDSVTSARLEAAWPRA
CCCHHHCHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHCCCCC
LRLDPSIRDAMAPHMRLLEQVARAAHTFDILHFHLDYLPFPLLSRLDAPFVTTLHGRLDL
EECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCEEEECCCCCC
PELQPVFDAFPNAPVVSISDSQRTPLPQAGWAGTVYHGLPDTLLAPQAGRKPEYLAFLGR
CCHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCHHCCCCCHHCCCCCCCCHHHHHHHHH
ICPEKRVDTAIRIAAQSGLPLKIAAKVDKVDEDYFKAEIEPLLDSAHVEFIGEINEAQKP
HCCHHHHHHHHHEEECCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
AFLSGAKALLFPIDWPEPFGLVMIEAMACGTPVVAFNRGSVPEVIDDGLTGFIVEDVQGA
HHHCCCCEEEEECCCCCCHHHHHHHHHHCCCCEEEECCCCCHHHHHCCCCHHHHHHHHHH
VGALHRIDELSRDAIRAQFEQRFSSHAMARRYIDIYETLRDATKQPQWQRVAAG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12068013 [H]