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The map label for this gene is feaR [H]

Identifier: 126454299

GI number: 126454299

Start: 49256

End: 50215

Strand: Direct

Name: feaR [H]

Synonym: BURPS1106A_0050

Alternate gene names: 126454299

Gene position: 49256-50215 (Clockwise)

Preceding gene: 126454786

Following gene: 126452383

Centisome position: 1.23

GC content: 66.56

Gene sequence:

>960_bases
ATGGTGAACGGCAGATTCTTCACGACGGCGGGCGAATCGCCCGCGTTTCGCGGCCGCGCATGGGGCCGCGTCGTCACGCA
ATACTTCGGCGGGCTCGATGCGTGTTGCGACGGCGACGACGCGTTCGACGCGCAGCTGAGCCAGTACGAGATCGGCCCGA
TGCGCGTGTTCACGATCACCGCGCCCGCGCACCGCATCGTGCGGCCCGCCGCGGCGCTGCACGATCACGGTTCCGACTTC
TTCAAGCTGATCCTGCAACTGAGCGGCGTGAGCGAGATCGAGCAGCGCGGCAAGACGTTCCGGCTGCACTCGGGCGACTG
GAGCCTGTACGATCCGCGCGTGCCGTACAGCATCGCGAACCTGACGCACGTCGAGCAGCTCGCGATCCAGATTCCGCGCA
AGCAGCTCGGCGGCTTCGCGGTGCCGGATCTGCATACGTCGGACGTGCGCGAGTTCGAGCTCAAGGGGCTGTTCTCGCTG
CTGTCTTCGTTTCTCGTGTCGTTGTCCGAACAATTGCCGTCGCTGCCCGGCACGACAGGCACCGCGCTATCGGAGACGAT
CCTCGGCCTGATCGTATCGACGCTGACCGCGCAGCGCGACGCGCAAGGCGAGCACGTCGCGCTGCCCGCCGTGCTGCGGA
TGCGCGTCAAGCAGTACATCCACGGCCACCTTGCCGACGCCGACCTGTCGATCGACCGGATCGCGCGCGAGCTACGCTGC
TCGAAGCGCTATCTGCACCGGATCTTCGAGGAGGAAGGCGTGACGATCGACCGTTACATCTGGTCGAGCCGGCTCGAGCG
CTGCAAGGATGCGCTCGACAACGCGCGCGCGGCGAAGCCGGCGATTTCCGAGATCGCGTTCAGCTGGGGGTTCAGCAGCA
GCGCGCATTTCTGCCGCAGCTTCAAGCAGCGCTATGGCATGACGCCGCGCGAATTCGTGCGCCGGCGTGCGTGGCCCTGA

Upstream 100 bases:

>100_bases
ACCGGATTCAGTTCGCGCCAAATATTTAATATGCTAACTATATCCGGCCAGACCGGATGCCCCTGCATGGTCCGGCTGGA
CGTGTACTCGCAAGGAGCGC

Downstream 100 bases:

>100_bases
GGCACCGGTTCGCGATTCCGGATTCGGGATTCCGCGTTCCGGGCGCCGATCGAAACGGCGTCGCCGCGTGCGCGGCGGGC
AGCCCGCATGGACCGCGCCC

Product: putative transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 319; Mature: 319

Protein sequence:

>319_residues
MVNGRFFTTAGESPAFRGRAWGRVVTQYFGGLDACCDGDDAFDAQLSQYEIGPMRVFTITAPAHRIVRPAAALHDHGSDF
FKLILQLSGVSEIEQRGKTFRLHSGDWSLYDPRVPYSIANLTHVEQLAIQIPRKQLGGFAVPDLHTSDVREFELKGLFSL
LSSFLVSLSEQLPSLPGTTGTALSETILGLIVSTLTAQRDAQGEHVALPAVLRMRVKQYIHGHLADADLSIDRIARELRC
SKRYLHRIFEEEGVTIDRYIWSSRLERCKDALDNARAAKPAISEIAFSWGFSSSAHFCRSFKQRYGMTPREFVRRRAWP

Sequences:

>Translated_319_residues
MVNGRFFTTAGESPAFRGRAWGRVVTQYFGGLDACCDGDDAFDAQLSQYEIGPMRVFTITAPAHRIVRPAAALHDHGSDF
FKLILQLSGVSEIEQRGKTFRLHSGDWSLYDPRVPYSIANLTHVEQLAIQIPRKQLGGFAVPDLHTSDVREFELKGLFSL
LSSFLVSLSEQLPSLPGTTGTALSETILGLIVSTLTAQRDAQGEHVALPAVLRMRVKQYIHGHLADADLSIDRIARELRC
SKRYLHRIFEEEGVTIDRYIWSSRLERCKDALDNARAAKPAISEIAFSWGFSSSAHFCRSFKQRYGMTPREFVRRRAWP
>Mature_319_residues
MVNGRFFTTAGESPAFRGRAWGRVVTQYFGGLDACCDGDDAFDAQLSQYEIGPMRVFTITAPAHRIVRPAAALHDHGSDF
FKLILQLSGVSEIEQRGKTFRLHSGDWSLYDPRVPYSIANLTHVEQLAIQIPRKQLGGFAVPDLHTSDVREFELKGLFSL
LSSFLVSLSEQLPSLPGTTGTALSETILGLIVSTLTAQRDAQGEHVALPAVLRMRVKQYIHGHLADADLSIDRIARELRC
SKRYLHRIFEEEGVTIDRYIWSSRLERCKDALDNARAAKPAISEIAFSWGFSSSAHFCRSFKQRYGMTPREFVRRRAWP

Specific function: Positive regulator of tynA/maoA and feaB/padA, the genes for 2-phenylethylamine catabolism [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1787649, Length=264, Percent_Identity=27.6515151515151, Blast_Score=94, Evalue=1e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR020449
- InterPro:   IPR018060 [H]

Pfam domain/function: PF00165 HTH_AraC [H]

EC number: NA

Molecular weight: Translated: 35830; Mature: 35830

Theoretical pI: Translated: 8.71; Mature: 8.71

Prosite motif: PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVNGRFFTTAGESPAFRGRAWGRVVTQYFGGLDACCDGDDAFDAQLSQYEIGPMRVFTIT
CCCCCEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCEEEEEEE
APAHRIVRPAAALHDHGSDFFKLILQLSGVSEIEQRGKTFRLHSGDWSLYDPRVPYSIAN
CCHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHCCCEEEEECCCCCCCCCCCCHHHHH
LTHVEQLAIQIPRKQLGGFAVPDLHTSDVREFELKGLFSLLSSFLVSLSEQLPSLPGTTG
HHHHHHHHHHCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
TALSETILGLIVSTLTAQRDAQGEHVALPAVLRMRVKQYIHGHLADADLSIDRIARELRC
HHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
SKRYLHRIFEEEGVTIDRYIWSSRLERCKDALDNARAAKPAISEIAFSWGFSSSAHFCRS
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHH
FKQRYGMTPREFVRRRAWP
HHHHHCCCHHHHHHHCCCC
>Mature Secondary Structure
MVNGRFFTTAGESPAFRGRAWGRVVTQYFGGLDACCDGDDAFDAQLSQYEIGPMRVFTIT
CCCCCEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCEEEEEEE
APAHRIVRPAAALHDHGSDFFKLILQLSGVSEIEQRGKTFRLHSGDWSLYDPRVPYSIAN
CCHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHCCCEEEEECCCCCCCCCCCCHHHHH
LTHVEQLAIQIPRKQLGGFAVPDLHTSDVREFELKGLFSLLSSFLVSLSEQLPSLPGTTG
HHHHHHHHHHCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
TALSETILGLIVSTLTAQRDAQGEHVALPAVLRMRVKQYIHGHLADADLSIDRIARELRC
HHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
SKRYLHRIFEEEGVTIDRYIWSSRLERCKDALDNARAAKPAISEIAFSWGFSSSAHFCRS
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHH
FKQRYGMTPREFVRRRAWP
HHHHHCCCHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8631685; 9043126; 9278503; 9109378 [H]