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The map label for this gene is ydjR [C]

Identifier: 126454263

GI number: 126454263

Start: 2687505

End: 2688164

Strand: Reverse

Name: ydjR [C]

Synonym: BURPS1106A_2720

Alternate gene names: 126454263

Gene position: 2688164-2687505 (Counterclockwise)

Preceding gene: 126453635

Following gene: 126451924

Centisome position: 67.4

GC content: 73.79

Gene sequence:

>660_bases
ATGCGGGCCGCGTCGTCCACGATGCAGGCGAGCTTGATTCGCGCGGATGCGCTCGTCGCGGCGCCGTGGAAGAATGGCGG
CGGCGTGACGCGCGAGATCGCCGCGCATCCGTTGCGCGAGCGCGCCGGCCACGGCGCGCTCGATGCGTTCGCGTGGCGCG
TGAGCGTCGCGGACGTCGCCGACGCGGGGCCGTTCTCGCGCTTTCCCGGCATCGACCGCACGCTCGTGCTGCTCGCGGGC
GCGGGGATGACGCTCGTCGACGCGGGCGGCGCGCGCCATGCGCTGCGCGCGCCGCTCGATCGCGTCGCGTTCGCGGGCGA
GGCGGCGATCGCGGCCGAGCTGCACGATGGCCCGACGCGCGACTTCAACCTGATGACGCGGCGCGATGCGGCGCGCGGCA
GCGTCGATGTCTGGCGCAGCGGCGCGTCGCACGCGCTGCGCGCCGACACCGTGCTGCTGTTCTGCGCGAGTGGCGCGCCC
GTCGTCGATCTCGGTGTCGACCTCGGCGTCGGCGCGCGCGTCGCGCTGGGCGCATGCGATACGCTGCGCATCGACGCGTG
CGCGCACGGCGAGTTCCGATGCGCGATTCGCGGCGAGGGCGTGCTCCTCGCCGTCGGCGTGACGCTTCTTCAAGACAACG
CACAAGGCTCGATCGAATGA

Upstream 100 bases:

>100_bases
ATCCGGCCACGGGCGTGATGCGTCACGCGGACGCCGGCTATGAGCTCGCGCAGCGCACCGCGAACGAAGCGGGCCTGAAG
CTGCCGATGCTCGGGCGCTG

Downstream 100 bases:

>100_bases
AATCGATTCTCTGGCACAACCTGAAGCTGTGCGCGCACGGCGACCCGAACGACACGATCGCGGATGCGGCGATCGCGGTG
AACGGCGACGGCACGATCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 219; Mature: 219

Protein sequence:

>219_residues
MRAASSTMQASLIRADALVAAPWKNGGGVTREIAAHPLRERAGHGALDAFAWRVSVADVADAGPFSRFPGIDRTLVLLAG
AGMTLVDAGGARHALRAPLDRVAFAGEAAIAAELHDGPTRDFNLMTRRDAARGSVDVWRSGASHALRADTVLLFCASGAP
VVDLGVDLGVGARVALGACDTLRIDACAHGEFRCAIRGEGVLLAVGVTLLQDNAQGSIE

Sequences:

>Translated_219_residues
MRAASSTMQASLIRADALVAAPWKNGGGVTREIAAHPLRERAGHGALDAFAWRVSVADVADAGPFSRFPGIDRTLVLLAG
AGMTLVDAGGARHALRAPLDRVAFAGEAAIAAELHDGPTRDFNLMTRRDAARGSVDVWRSGASHALRADTVLLFCASGAP
VVDLGVDLGVGARVALGACDTLRIDACAHGEFRCAIRGEGVLLAVGVTLLQDNAQGSIE
>Mature_219_residues
MRAASSTMQASLIRADALVAAPWKNGGGVTREIAAHPLRERAGHGALDAFAWRVSVADVADAGPFSRFPGIDRTLVLLAG
AGMTLVDAGGARHALRAPLDRVAFAGEAAIAAELHDGPTRDFNLMTRRDAARGSVDVWRSGASHALRADTVLLFCASGAP
VVDLGVDLGVGARVALGACDTLRIDACAHGEFRCAIRGEGVLLAVGVTLLQDNAQGSIE

Specific function: Unknown

COG id: COG3758

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ydjR [H]

Homologues:

Organism=Escherichia coli, GI87081963, Length=116, Percent_Identity=38.7931034482759, Blast_Score=79, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011051
- InterPro:   IPR010282 [H]

Pfam domain/function: PF05962 HutD [H]

EC number: NA

Molecular weight: Translated: 22584; Mature: 22584

Theoretical pI: Translated: 6.78; Mature: 6.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRAASSTMQASLIRADALVAAPWKNGGGVTREIAAHPLRERAGHGALDAFAWRVSVADVA
CCCCHHHHHHHHHHHCEEEECCCCCCCCCHHHHHHCHHHHHCCCCCHHHHEEEEEEHHHC
DAGPFSRFPGIDRTLVLLAGAGMTLVDAGGARHALRAPLDRVAFAGEAAIAAELHDGPTR
CCCCCCCCCCCCEEEEEEECCCEEEEECCCCCHHHHCCHHHHHHCCCCEEEEECCCCCCC
DFNLMTRRDAARGSVDVWRSGASHALRADTVLLFCASGAPVVDLGVDLGVGARVALGACD
CCEEEECCCCCCCCHHHHHCCCCCCEECCEEEEEECCCCCEEEECCCCCCCCEEEECCCC
TLRIDACAHGEFRCAIRGEGVLLAVGVTLLQDNAQGSIE
EEEEEEECCCCEEEEEECCCEEEEEEEEEEECCCCCCCC
>Mature Secondary Structure
MRAASSTMQASLIRADALVAAPWKNGGGVTREIAAHPLRERAGHGALDAFAWRVSVADVA
CCCCHHHHHHHHHHHCEEEECCCCCCCCCHHHHHHCHHHHHCCCCCHHHHEEEEEEHHHC
DAGPFSRFPGIDRTLVLLAGAGMTLVDAGGARHALRAPLDRVAFAGEAAIAAELHDGPTR
CCCCCCCCCCCCEEEEEEECCCEEEEECCCCCHHHHCCHHHHHHCCCCEEEEECCCCCCC
DFNLMTRRDAARGSVDVWRSGASHALRADTVLLFCASGAPVVDLGVDLGVGARVALGACD
CCEEEECCCCCCCCHHHHHCCCCCCEECCEEEEEECCCCCEEEECCCCCCCCEEEECCCC
TLRIDACAHGEFRCAIRGEGVLLAVGVTLLQDNAQGSIE
EEEEEEECCCCEEEEEECCCEEEEEEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2203753 [H]