| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
Click here to switch to the map view.
The map label for this gene is hemH [H]
Identifier: 126454237
GI number: 126454237
Start: 3232905
End: 3234008
Strand: Reverse
Name: hemH [H]
Synonym: BURPS1106A_3316
Alternate gene names: 126454237
Gene position: 3234008-3232905 (Counterclockwise)
Preceding gene: 126455393
Following gene: 126452935
Centisome position: 81.08
GC content: 69.2
Gene sequence:
>1104_bases GTGTCGTTCGATTCGGTGCCCCGGCACGCTCTTTCCATGCGTTTTGACCTCGAACCGCCGTCGCACGCGTCGGCCGCCCA CCGCGTCGCCGTGCTGCTCGTCAATCTCGGCACGCCCGACGCGCCGACGCCGCGCGCGGTGCGCCGCTATCTGGCGCAGT TCCTGTCCGACCCGCGCGTCGTCGAGATTCCGCAGCTCGTCTGGCAGGTGATCCTGCGCACGCTGATCCTGCCGCTGCGC GGCCGCGCGTCCGCGAAGAAATACGCGGCTGTCTGGCTGCCGGAAGGCTCGCCGCTGCGCGTTTATACGGAGCGCCAGGT CGAGAGCGTGAAACCGCTCTTTGCGGCGAACGGCTACCGGGTGATCGTCGATTACGCGATGCGCTACGGCACGCCGAGCA TCGCCGACGTGCTCGCGCAACTGAAGCGCGCGGGCGCCGAGCGCGTGCTGCTGCTGCCGATGTATCCGCAATATTCGTCA TCGACGACGGCCACCGCGTTCGACGCGGCGTTCGCCGCGCTCGGCCGGATGCGCAACCAGCCGGAGGTCCGCACGGTGCG CCACTACGCGGATCACCCGGCCTATATCCACGCGCTCGCCGAGCAGGTCCGCCAGTATTGGGCGGCGCATGGCCGGCCGG CTTTCGATGCGGGCGACAAGCTCGTGCTGAGCTTTCACGGCGTGCCCAAGCGCACGCTCGACCTCGGCGATCCTTACCAT GACCAGTGCCAGCAGACAGCCGCGCTGTTGATGTCCGCGCTCGGCCTGACGACGTTCGAGTGCCGGGTCACGTTCCAGTC GCGCTTCGGCAAGGCCGAGTGGCTGCAGCCCTACACGGCGCCCACCCTCAAGGAGCTCGGCGCGGCGGGCGTGCGGCGCG CCGACGTGTTCTGCCCGGGCTTCACGGCCGACTGCCTCGAGACGATCGAGGAGATCGGCATCGAAGTGCGCGACGAGTTC GTGCACGGCGGCGGCAAGGAGTTTCACCGGATTCCGTGCCTGAATGCGTCGCCCGCGTGGATCGCCGCGCTCGGCGAGAT CGCCGCGGAAAACCTGCAAGGCTGGCCGGTGCGCGTCGCGATGGCGCCGGAAGCCGTGAGCTGA
Upstream 100 bases:
>100_bases TTCCGCTCGGGCTACGTCATCGCCATCGTGCCGGCCCGCCGGGCGCCGTGCAATCGGCCGGACGGCCGACTGGTGGTGCC CGGCCGCCCCGCTATAATGA
Downstream 100 bases:
>100_bases TCGCGATGAACTTCAAGATTTCGACCGAACCCGGCGCGCGGCTGCGCATCGACAAATGGCTCTGGGCCGCGCGCTTCTTC AAGACCCGCTCGCTCGCGGC
Product: ferrochelatase
Products: NA
Alternate protein names: Heme synthase; Protoheme ferro-lyase [H]
Number of amino acids: Translated: 367; Mature: 366
Protein sequence:
>367_residues MSFDSVPRHALSMRFDLEPPSHASAAHRVAVLLVNLGTPDAPTPRAVRRYLAQFLSDPRVVEIPQLVWQVILRTLILPLR GRASAKKYAAVWLPEGSPLRVYTERQVESVKPLFAANGYRVIVDYAMRYGTPSIADVLAQLKRAGAERVLLLPMYPQYSS STTATAFDAAFAALGRMRNQPEVRTVRHYADHPAYIHALAEQVRQYWAAHGRPAFDAGDKLVLSFHGVPKRTLDLGDPYH DQCQQTAALLMSALGLTTFECRVTFQSRFGKAEWLQPYTAPTLKELGAAGVRRADVFCPGFTADCLETIEEIGIEVRDEF VHGGGKEFHRIPCLNASPAWIAALGEIAAENLQGWPVRVAMAPEAVS
Sequences:
>Translated_367_residues MSFDSVPRHALSMRFDLEPPSHASAAHRVAVLLVNLGTPDAPTPRAVRRYLAQFLSDPRVVEIPQLVWQVILRTLILPLR GRASAKKYAAVWLPEGSPLRVYTERQVESVKPLFAANGYRVIVDYAMRYGTPSIADVLAQLKRAGAERVLLLPMYPQYSS STTATAFDAAFAALGRMRNQPEVRTVRHYADHPAYIHALAEQVRQYWAAHGRPAFDAGDKLVLSFHGVPKRTLDLGDPYH DQCQQTAALLMSALGLTTFECRVTFQSRFGKAEWLQPYTAPTLKELGAAGVRRADVFCPGFTADCLETIEEIGIEVRDEF VHGGGKEFHRIPCLNASPAWIAALGEIAAENLQGWPVRVAMAPEAVS >Mature_366_residues SFDSVPRHALSMRFDLEPPSHASAAHRVAVLLVNLGTPDAPTPRAVRRYLAQFLSDPRVVEIPQLVWQVILRTLILPLRG RASAKKYAAVWLPEGSPLRVYTERQVESVKPLFAANGYRVIVDYAMRYGTPSIADVLAQLKRAGAERVLLLPMYPQYSSS TTATAFDAAFAALGRMRNQPEVRTVRHYADHPAYIHALAEQVRQYWAAHGRPAFDAGDKLVLSFHGVPKRTLDLGDPYHD QCQQTAALLMSALGLTTFECRVTFQSRFGKAEWLQPYTAPTLKELGAAGVRRADVFCPGFTADCLETIEEIGIEVRDEFV HGGGKEFHRIPCLNASPAWIAALGEIAAENLQGWPVRVAMAPEAVS
Specific function: Catalyzes the ferrous insertion into protoporphyrin IX [H]
COG id: COG0276
COG function: function code H; Protoheme ferro-lyase (ferrochelatase)
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ferrochelatase family [H]
Homologues:
Organism=Homo sapiens, GI60499025, Length=269, Percent_Identity=25.6505576208178, Blast_Score=97, Evalue=3e-20, Organism=Homo sapiens, GI60499021, Length=269, Percent_Identity=25.6505576208178, Blast_Score=97, Evalue=3e-20, Organism=Escherichia coli, GI1786681, Length=322, Percent_Identity=45.6521739130435, Blast_Score=278, Evalue=5e-76, Organism=Saccharomyces cerevisiae, GI6324750, Length=357, Percent_Identity=23.249299719888, Blast_Score=85, Evalue=2e-17, Organism=Drosophila melanogaster, GI17864156, Length=339, Percent_Identity=26.5486725663717, Blast_Score=108, Evalue=5e-24, Organism=Drosophila melanogaster, GI24651774, Length=268, Percent_Identity=26.4925373134328, Blast_Score=86, Evalue=5e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001015 - InterPro: IPR019772 [H]
Pfam domain/function: PF00762 Ferrochelatase [H]
EC number: =4.99.1.1 [H]
Molecular weight: Translated: 40571; Mature: 40440
Theoretical pI: Translated: 8.45; Mature: 8.45
Prosite motif: PS00534 FERROCHELATASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFDSVPRHALSMRFDLEPPSHASAAHRVAVLLVNLGTPDAPTPRAVRRYLAQFLSDPRV CCCCHHCHHHHHEEECCCCCCCHHHHHEEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCE VEIPQLVWQVILRTLILPLRGRASAKKYAAVWLPEGSPLRVYTERQVESVKPLFAANGYR EHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCEEEEEHHHHHHHCHHHHCCCCE VIVDYAMRYGTPSIADVLAQLKRAGAERVLLLPMYPQYSSSTTATAFDAAFAALGRMRNQ EEEHHHHHCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCC PEVRTVRHYADHPAYIHALAEQVRQYWAAHGRPAFDAGDKLVLSFHGVPKRTLDLGDPYH CHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCCHH DQCQQTAALLMSALGLTTFECRVTFQSRFGKAEWLQPYTAPTLKELGAAGVRRADVFCPG HHHHHHHHHHHHHHCCCEEEEEEEEHHHCCCHHHCCCCCCHHHHHHCCCCCCCCCEECCC FTADCLETIEEIGIEVRDEFVHGGGKEFHRIPCLNASPAWIAALGEIAAENLQGWPVRVA CCHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEE MAPEAVS ECCCCCC >Mature Secondary Structure SFDSVPRHALSMRFDLEPPSHASAAHRVAVLLVNLGTPDAPTPRAVRRYLAQFLSDPRV CCCHHCHHHHHEEECCCCCCCHHHHHEEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCE VEIPQLVWQVILRTLILPLRGRASAKKYAAVWLPEGSPLRVYTERQVESVKPLFAANGYR EHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCEEEEEHHHHHHHCHHHHCCCCE VIVDYAMRYGTPSIADVLAQLKRAGAERVLLLPMYPQYSSSTTATAFDAAFAALGRMRNQ EEEHHHHHCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCC PEVRTVRHYADHPAYIHALAEQVRQYWAAHGRPAFDAGDKLVLSFHGVPKRTLDLGDPYH CHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCCHH DQCQQTAALLMSALGLTTFECRVTFQSRFGKAEWLQPYTAPTLKELGAAGVRRADVFCPG HHHHHHHHHHHHHHCCCEEEEEEEEHHHCCCHHHCCCCCCHHHHHHCCCCCCCCCEECCC FTADCLETIEEIGIEVRDEFVHGGGKEFHRIPCLNASPAWIAALGEIAAENLQGWPVRVA CCHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEE MAPEAVS ECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA