| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is ywrA [H]
Identifier: 126454196
GI number: 126454196
Start: 276738
End: 277268
Strand: Direct
Name: ywrA [H]
Synonym: BURPS1106A_0295
Alternate gene names: 126454196
Gene position: 276738-277268 (Clockwise)
Preceding gene: 126455032
Following gene: 126452020
Centisome position: 6.94
GC content: 69.68
Gene sequence:
>531_bases ATGAGCGACACGCTTGCCGCGCTCGCGGTGATCTTCGGCCAGCTTTCGCTGCTCGCGTTCGGCGGCGGCAACACGATCCT GCCCGAGATGCAGCGGCAGGTCGTCGACGTTCATCACTGGATGAGCGCGCAGGCGTTCACCGCGCTCTTCGCGCTCGCGC AGGCGGCGCCCGGGCCGAACATGATGATCGTGCCGCTCGTCGGCTGGCACGTCGCGAGCTGGCCGGGCCTGCTCGTATCG TCGATCGCGAAGTTCGGGCCGTCGTCGATCGTGACGATGGCCGCGCTGCATGCGTGGGAGCGTTTCAAGGACAAGCCGTG GCGGCGCTACGTGCAGCAGGGAATGATGCCCGTCACCGCGGGCCTCGTCGTCGCGAGCGCGGTGTTGATCTCCGAGGCGT CGAACCGCTCGGCGCTGCAATGGGGAATCACCGCGGCGGTCGCGGCGCTCGCGTACCGCACGCGCGTGCATCCGTTGTGG CTGCTCGCGGGCGGCGCGCTCGCTGGGCTCGTCGGCGGGTGGTTCGCATAG
Upstream 100 bases:
>100_bases TGCCGCTGTTGCCGACGATGCTCGTGGTGACGCCCGTGAGCATCTGGCTCGCGTCGCGCGCGCCGCGCGGCGCGAATGCG GGCGCGCAAGGCGTGCGGCG
Downstream 100 bases:
>100_bases GCGCATGCCGAAGCGGCGCGCAACGGGCAGCGGCGGGCCGCGGCGGGCGGGCACAGGCGGTGGGCGCGGCGCGCACGCAC CAGCGCCTCGCACACGCAGC
Product: chromate transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 176; Mature: 175
Protein sequence:
>176_residues MSDTLAALAVIFGQLSLLAFGGGNTILPEMQRQVVDVHHWMSAQAFTALFALAQAAPGPNMMIVPLVGWHVASWPGLLVS SIAKFGPSSIVTMAALHAWERFKDKPWRRYVQQGMMPVTAGLVVASAVLISEASNRSALQWGITAAVAALAYRTRVHPLW LLAGGALAGLVGGWFA
Sequences:
>Translated_176_residues MSDTLAALAVIFGQLSLLAFGGGNTILPEMQRQVVDVHHWMSAQAFTALFALAQAAPGPNMMIVPLVGWHVASWPGLLVS SIAKFGPSSIVTMAALHAWERFKDKPWRRYVQQGMMPVTAGLVVASAVLISEASNRSALQWGITAAVAALAYRTRVHPLW LLAGGALAGLVGGWFA >Mature_175_residues SDTLAALAVIFGQLSLLAFGGGNTILPEMQRQVVDVHHWMSAQAFTALFALAQAAPGPNMMIVPLVGWHVASWPGLLVSS IAKFGPSSIVTMAALHAWERFKDKPWRRYVQQGMMPVTAGLVVASAVLISEASNRSALQWGITAAVAALAYRTRVHPLWL LAGGALAGLVGGWFA
Specific function: Unknown
COG id: COG2059
COG function: function code P; Chromate transport protein ChrA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the chromate ion transporter (CHR) (TC 2.A.51) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003370 [H]
Pfam domain/function: PF02417 Chromate_transp [H]
EC number: NA
Molecular weight: Translated: 18703; Mature: 18572
Theoretical pI: Translated: 10.69; Mature: 10.69
Prosite motif: PS01036 HSP70_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDTLAALAVIFGQLSLLAFGGGNTILPEMQRQVVDVHHWMSAQAFTALFALAQAAPGPN CCHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC MMIVPLVGWHVASWPGLLVSSIAKFGPSSIVTMAALHAWERFKDKPWRRYVQQGMMPVTA EEEEEECCCHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHH GLVVASAVLISEASNRSALQWGITAAVAALAYRTRVHPLWLLAGGALAGLVGGWFA HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SDTLAALAVIFGQLSLLAFGGGNTILPEMQRQVVDVHHWMSAQAFTALFALAQAAPGPN CHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC MMIVPLVGWHVASWPGLLVSSIAKFGPSSIVTMAALHAWERFKDKPWRRYVQQGMMPVTA EEEEEECCCHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHH GLVVASAVLISEASNRSALQWGITAAVAALAYRTRVHPLWLLAGGALAGLVGGWFA HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9353933; 9384377 [H]