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The map label for this gene is yhfM [C]

Identifier: 126454164

GI number: 126454164

Start: 3916143

End: 3917552

Strand: Reverse

Name: yhfM [C]

Synonym: BURPS1106A_4012

Alternate gene names: 126454164

Gene position: 3917552-3916143 (Counterclockwise)

Preceding gene: 126453590

Following gene: 126455070

Centisome position: 98.22

GC content: 67.8

Gene sequence:

>1410_bases
ATGCAGACAGAGTCGAATGGCCGCCCCGGCGCGGGCGGTGGCGCAGCGCGGCCGGCGCTTCAGCAGACGCTCGGCACGTG
GCAGCTGTGGGGAATTGCCGTCGGCCTCGTGATTTCGGGCGAGTACTTCGGCTGGAGTTACGGCTGGGCGAGCGCGGGCA
CGCTCGGCTTCGTCGTCACCGCGCTGTTCGTCGCGGCGATGTACACGACCTTCATCTTCAGCTTCACCGAGCTCACGACG
TCGATTCCGCACGCGGGCGGCCCGTTCGCCTATGCGCGGCGCGCGTTCGGCCCGGCGGGCGGCTATCTGGCGGGCGTCGC
GACCCTTGTCGAGTTCGTGTTCGCGCCGCCCGCGATCGCGCTCGCGATCGGCGCGTACCTGCACGTGCAGTTTTCCGGCC
TCGAGCCGAAGCACGCGGCGATGGGCGCGTACCTCGTGTTCATGGCGCTGAATATCGTCGGCGTGCAGATCGCCGCGACG
TTCGAGCTCGTCGTCACGCTGCTCGCGATCTTCGAGCTGCTCGTGTTCATGGGCGTCGTATCGCCGGGCTTCGCCTGGAG
CAACTTCGTGAAGGGCGGCTGGGCGGGCGCCGATCACTTCAGCGCCGGCGCGTTCCATGGCATGTTCGCGGCGATCCCGT
TCGCGATCTGGTTCTTCCTCGCGATCGAGGGTGTCGCGATGGCGGCCGAGGAGGCGAAGCACCCGAAACGCTCGATTCCG
ATCGCGTACGTGGCCGGCATCCTGACGCTCGTGGCGCTCGCGATCGGCGTGATGGTGTTCGCGGGCGGCGCGGGCGACTG
GACCAAGCTCGCGAATATCAACGATCCGCTGCCGCAGGCGATGAAGTACATCGTCGGCGCGAACAGCGGCTGGATGCACA
TGCTCGTGTGGCTCGGCCTGTTCGGCCTCGTCGCGTCGTTCCACGGGATCATTCTCGGCTATTCGCGCCAGATCTTCGCG
CTCGCCCGCGAAGGTTACCTGCCCGAATGGCTCGCGAAGGTGCACCCGCGCTTCAAGACGCCTTATCGCGCGATCCTCGC
GGGCGGCGTGGTCGGCATCGCCGCGATCTACAGCGACGAGCTGATCCAGTTCGGCGGCCAGACGCTCACCGCGAACATCG
TGACGATGTCCGTGTTCGGCGCTATCGTGATGTACATCGTCAGCATGGCCGCGCTCTTCAAGCTGCGCCGCGTGCAGCCG
AGGATGGAGCGCCCGTTCCGCGCGCCGCTGTATCCGTTCTTCCCGGCGTTCGCGCTCGTCGCGGCGCTCGTGTGCCTCGG
CACGATGGTGTACTTCAACGCGCTCGTCGCGTCGATCTTCGTCGCGTTCGTCGCGCTCGGGTACGGCTACTTCCTCGCGA
CGCGCGCGCAGCGCGAGGCCGCGCCCGCCGACGCGCTGCTCGAGGAGTAG

Upstream 100 bases:

>100_bases
ATTTTCGATAACACGTCGATTAATGACTCACTAGCATCGATTCTCAGTGGCGAGCCGCGCCTGTCTCGGTGCCGGATTCC
GCCCCTTCGAGGAGAGATTC

Downstream 100 bases:

>100_bases
CAGGCGTGCGCCGCGCGCCGGAGGGCGGCGCGCGGCCGTTACGATAGGGAGTACAGATGCGATATACGGAGACGATCGGT
TCGCGCACCTACCGCTTCGC

Product: putative ethanolamine permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 469; Mature: 469

Protein sequence:

>469_residues
MQTESNGRPGAGGGAARPALQQTLGTWQLWGIAVGLVISGEYFGWSYGWASAGTLGFVVTALFVAAMYTTFIFSFTELTT
SIPHAGGPFAYARRAFGPAGGYLAGVATLVEFVFAPPAIALAIGAYLHVQFSGLEPKHAAMGAYLVFMALNIVGVQIAAT
FELVVTLLAIFELLVFMGVVSPGFAWSNFVKGGWAGADHFSAGAFHGMFAAIPFAIWFFLAIEGVAMAAEEAKHPKRSIP
IAYVAGILTLVALAIGVMVFAGGAGDWTKLANINDPLPQAMKYIVGANSGWMHMLVWLGLFGLVASFHGIILGYSRQIFA
LAREGYLPEWLAKVHPRFKTPYRAILAGGVVGIAAIYSDELIQFGGQTLTANIVTMSVFGAIVMYIVSMAALFKLRRVQP
RMERPFRAPLYPFFPAFALVAALVCLGTMVYFNALVASIFVAFVALGYGYFLATRAQREAAPADALLEE

Sequences:

>Translated_469_residues
MQTESNGRPGAGGGAARPALQQTLGTWQLWGIAVGLVISGEYFGWSYGWASAGTLGFVVTALFVAAMYTTFIFSFTELTT
SIPHAGGPFAYARRAFGPAGGYLAGVATLVEFVFAPPAIALAIGAYLHVQFSGLEPKHAAMGAYLVFMALNIVGVQIAAT
FELVVTLLAIFELLVFMGVVSPGFAWSNFVKGGWAGADHFSAGAFHGMFAAIPFAIWFFLAIEGVAMAAEEAKHPKRSIP
IAYVAGILTLVALAIGVMVFAGGAGDWTKLANINDPLPQAMKYIVGANSGWMHMLVWLGLFGLVASFHGIILGYSRQIFA
LAREGYLPEWLAKVHPRFKTPYRAILAGGVVGIAAIYSDELIQFGGQTLTANIVTMSVFGAIVMYIVSMAALFKLRRVQP
RMERPFRAPLYPFFPAFALVAALVCLGTMVYFNALVASIFVAFVALGYGYFLATRAQREAAPADALLEE
>Mature_469_residues
MQTESNGRPGAGGGAARPALQQTLGTWQLWGIAVGLVISGEYFGWSYGWASAGTLGFVVTALFVAAMYTTFIFSFTELTT
SIPHAGGPFAYARRAFGPAGGYLAGVATLVEFVFAPPAIALAIGAYLHVQFSGLEPKHAAMGAYLVFMALNIVGVQIAAT
FELVVTLLAIFELLVFMGVVSPGFAWSNFVKGGWAGADHFSAGAFHGMFAAIPFAIWFFLAIEGVAMAAEEAKHPKRSIP
IAYVAGILTLVALAIGVMVFAGGAGDWTKLANINDPLPQAMKYIVGANSGWMHMLVWLGLFGLVASFHGIILGYSRQIFA
LAREGYLPEWLAKVHPRFKTPYRAILAGGVVGIAAIYSDELIQFGGQTLTANIVTMSVFGAIVMYIVSMAALFKLRRVQP
RMERPFRAPLYPFFPAFALVAALVCLGTMVYFNALVASIFVAFVALGYGYFLATRAQREAAPADALLEE

Specific function: Probable amino-acid or metabolite transport protein [H]

COG id: COG0531

COG function: function code E; Amino acid transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily [H]

Homologues:

Organism=Homo sapiens, GI7657683, Length=389, Percent_Identity=25.706940874036, Blast_Score=87, Evalue=4e-17,
Organism=Homo sapiens, GI4507047, Length=231, Percent_Identity=28.5714285714286, Blast_Score=72, Evalue=2e-12,
Organism=Escherichia coli, GI87082250, Length=447, Percent_Identity=23.9373601789709, Blast_Score=86, Evalue=5e-18,
Organism=Escherichia coli, GI87081869, Length=383, Percent_Identity=23.4986945169713, Blast_Score=76, Evalue=4e-15,
Organism=Escherichia coli, GI87082023, Length=339, Percent_Identity=25.6637168141593, Blast_Score=68, Evalue=1e-12,
Organism=Escherichia coli, GI1786789, Length=385, Percent_Identity=22.0779220779221, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI2367353, Length=332, Percent_Identity=25.6024096385542, Blast_Score=65, Evalue=9e-12,
Organism=Escherichia coli, GI87081708, Length=495, Percent_Identity=22.020202020202, Blast_Score=63, Evalue=4e-11,
Organism=Caenorhabditis elegans, GI17540018, Length=435, Percent_Identity=23.9080459770115, Blast_Score=80, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI71982612, Length=374, Percent_Identity=23.2620320855615, Blast_Score=67, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17532491, Length=410, Percent_Identity=25.1219512195122, Blast_Score=67, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI71982608, Length=374, Percent_Identity=23.2620320855615, Blast_Score=67, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24667468, Length=361, Percent_Identity=22.9916897506925, Blast_Score=74, Evalue=2e-13,
Organism=Drosophila melanogaster, GI221512776, Length=386, Percent_Identity=24.0932642487047, Blast_Score=72, Evalue=8e-13,
Organism=Drosophila melanogaster, GI24666159, Length=386, Percent_Identity=24.0932642487047, Blast_Score=72, Evalue=9e-13,
Organism=Drosophila melanogaster, GI281366235, Length=365, Percent_Identity=24.1095890410959, Blast_Score=68, Evalue=1e-11,
Organism=Drosophila melanogaster, GI116007820, Length=365, Percent_Identity=24.1095890410959, Blast_Score=68, Evalue=1e-11,
Organism=Drosophila melanogaster, GI116007818, Length=365, Percent_Identity=24.1095890410959, Blast_Score=65, Evalue=9e-11,
Organism=Drosophila melanogaster, GI85725152, Length=365, Percent_Identity=24.1095890410959, Blast_Score=65, Evalue=9e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004841
- InterPro:   IPR002293 [H]

Pfam domain/function: PF00324 AA_permease [H]

EC number: NA

Molecular weight: Translated: 50054; Mature: 50054

Theoretical pI: Translated: 9.02; Mature: 9.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCC
>Mature Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11481430 [H]