| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is braE [H]
Identifier: 126454057
GI number: 126454057
Start: 971590
End: 972759
Strand: Direct
Name: braE [H]
Synonym: BURPS1106A_0990
Alternate gene names: 126454057
Gene position: 971590-972759 (Clockwise)
Preceding gene: 126453328
Following gene: 126453383
Centisome position: 24.36
GC content: 66.24
Gene sequence:
>1170_bases ATGACATCCATTCAACCGATCGAAACATCGGCTTCGCTCGTCGAGGAACGCCACCCCGCGAAGACCGCCACCGTCGGCAT CCTGATCGCGGCGTTCGTGATCGCCGCGCCGCTCGTCATCGGCGCGGCGGGCGGCAACTACTGGGTCCGCGTGCTCGACT TCGCGATGCTGTACGTGATGCTCGCGCTCGGCCTGAACGTGGTGGTCGGCTTCGCCGGCCTGCTCGATCTCGGCTACATC GCGTTCTACGCGGTGGGCGCCTATACCGCGGCGCTGTTGAGCTCGCCGCACCTGACGTCGCACTTCGACTGGATCGCGCA GATGGTGCCGGGCGGCCTGCACGTGCCGTTCCTGCTGATCGTGCCGATCGCGATGGCGCTCGCGGCGATCTTCGGCATCC TGCTCGGCGCGCCGACGCTGCGCCTGCGCGGCGATTACCTCGCGATCGTCACGCTCGGCTTCGGCGAGATCGTCCGGATC TTCATGAACAACCTCGACCGCCCGGTCAACGTGACGAACGGGCCGCAAGGGATCACCGGCATCGATCCCGTCCAGGTCGC GGGCTTCAACCTGTCGCAGACGCACGAGATCTTCGGCTTCTCGCTGCCGTCCGTGTACATGTACTACTACCTGTTCGTGC TCTGCGCGCTGCTCGTCATCTGGGTCTGCACGCGCCTGCAGCACTCGCGGATCGGCCGCGCATGGGCCGCGATTCGCGAA GACGAGATCGCCGCGAAGGCGATGGGCATCAACACCCGCAACGTGAAGCTGCTCGCGTTCGCGATGGGCGCGTCGTTCGG CGGCCTGTCGGGCGCGATGTTCGGCGCGTTCCAGGGCTTCGTGTCGCCGGAATCGTTCACGTTCTGGGAATCGGTCGTCG TGCTCGCGTGCGTCGTGCTGGGCGGCATGGGCCACATCCCGGGCGTGATTCTCGGCGCGGTCCTGCTCGCCGTGTTCCCC GAATTCCTGCGCTCGACGATGAGCCCGCTGCAGCACATGCTGTTCGGCCACGACATCGTCGATACCGAAGTGATTCGCCA GGCTCTCTACGGCCTCGCGATGGTGGTCATCATGCTGTATCGCTCGGAAGGCCTGTGGCCCGCGCCGAAGCACGAGGATC GGATCGCGAAACTGGCGAAGCGCGGCGGCAAGAAGCCGGTGCGCGCGTAA
Upstream 100 bases:
>100_bases CAGGACGTGTTCGCGTTCGTCGTGCTCATCATCGTGCTCGTGTTCCGGCCGTCGGGCCTGCTGGGCGAACGTGTCGCCGA CCGCGCGTAAGGAGAACAAC
Downstream 100 bases:
>100_bases AGGACGTGGGACCGGCGCTGCGCGCACGAGCGCGAGCGCCGGTCGACCCAGGAGAAAAGGTAATGAGCGAACAAATTCGA CTGTCCGTCAAAGGCGTGAA
Product: hydrophobic amino acid ABC transporter permease/ATP-binding protein
Products: ADP; phosphate; L-valine [Cytoplasm]; ADP; L-iso-leucine [Cytoplasm]; L-leucine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 389; Mature: 388
Protein sequence:
>389_residues MTSIQPIETSASLVEERHPAKTATVGILIAAFVIAAPLVIGAAGGNYWVRVLDFAMLYVMLALGLNVVVGFAGLLDLGYI AFYAVGAYTAALLSSPHLTSHFDWIAQMVPGGLHVPFLLIVPIAMALAAIFGILLGAPTLRLRGDYLAIVTLGFGEIVRI FMNNLDRPVNVTNGPQGITGIDPVQVAGFNLSQTHEIFGFSLPSVYMYYYLFVLCALLVIWVCTRLQHSRIGRAWAAIRE DEIAAKAMGINTRNVKLLAFAMGASFGGLSGAMFGAFQGFVSPESFTFWESVVVLACVVLGGMGHIPGVILGAVLLAVFP EFLRSTMSPLQHMLFGHDIVDTEVIRQALYGLAMVVIMLYRSEGLWPAPKHEDRIAKLAKRGGKKPVRA
Sequences:
>Translated_389_residues MTSIQPIETSASLVEERHPAKTATVGILIAAFVIAAPLVIGAAGGNYWVRVLDFAMLYVMLALGLNVVVGFAGLLDLGYI AFYAVGAYTAALLSSPHLTSHFDWIAQMVPGGLHVPFLLIVPIAMALAAIFGILLGAPTLRLRGDYLAIVTLGFGEIVRI FMNNLDRPVNVTNGPQGITGIDPVQVAGFNLSQTHEIFGFSLPSVYMYYYLFVLCALLVIWVCTRLQHSRIGRAWAAIRE DEIAAKAMGINTRNVKLLAFAMGASFGGLSGAMFGAFQGFVSPESFTFWESVVVLACVVLGGMGHIPGVILGAVLLAVFP EFLRSTMSPLQHMLFGHDIVDTEVIRQALYGLAMVVIMLYRSEGLWPAPKHEDRIAKLAKRGGKKPVRA >Mature_388_residues TSIQPIETSASLVEERHPAKTATVGILIAAFVIAAPLVIGAAGGNYWVRVLDFAMLYVMLALGLNVVVGFAGLLDLGYIA FYAVGAYTAALLSSPHLTSHFDWIAQMVPGGLHVPFLLIVPIAMALAAIFGILLGAPTLRLRGDYLAIVTLGFGEIVRIF MNNLDRPVNVTNGPQGITGIDPVQVAGFNLSQTHEIFGFSLPSVYMYYYLFVLCALLVIWVCTRLQHSRIGRAWAAIRED EIAAKAMGINTRNVKLLAFAMGASFGGLSGAMFGAFQGFVSPESFTFWESVVVLACVVLGGMGHIPGVILGAVLLAVFPE FLRSTMSPLQHMLFGHDIVDTEVIRQALYGLAMVVIMLYRSEGLWPAPKHEDRIAKLAKRGGKKPVRA
Specific function: Component of the high affinity leucine, isoleucine, valine, transport system (LIV-I), which is operative without Na(+) and is specific for alanine and threonine, in addition to branched-chain amino acids [H]
COG id: COG4177
COG function: function code E; ABC-type branched-chain amino acid transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the binding-protein-dependent transport system permease family. LivHM subfamily [H]
Homologues:
Organism=Escherichia coli, GI1789865, Length=346, Percent_Identity=42.485549132948, Blast_Score=212, Evalue=3e-56,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001851 - InterPro: IPR021807 [H]
Pfam domain/function: PF02653 BPD_transp_2; PF11862 DUF3382 [H]
EC number: NA
Molecular weight: Translated: 41922; Mature: 41791
Theoretical pI: Translated: 8.44; Mature: 8.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSIQPIETSASLVEERHPAKTATVGILIAAFVIAAPLVIGAAGGNYWVRVLDFAMLYVM CCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH LALGLNVVVGFAGLLDLGYIAFYAVGAYTAALLSSPHLTSHFDWIAQMVPGGLHVPFLLI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHH VPIAMALAAIFGILLGAPTLRLRGDYLAIVTLGFGEIVRIFMNNLDRPVNVTNGPQGITG HHHHHHHHHHHHHHHCCCCEEECCCEEEEEEHHHHHHHHHHHHCCCCCCCCCCCCCCCCC IDPVQVAGFNLSQTHEIFGFSLPSVYMYYYLFVLCALLVIWVCTRLQHSRIGRAWAAIRE CCCHHCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DEIAAKAMGINTRNVKLLAFAMGASFGGLSGAMFGAFQGFVSPESFTFWESVVVLACVVL HHHHHHHHCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH GGMGHIPGVILGAVLLAVFPEFLRSTMSPLQHMLFGHDIVDTEVIRQALYGLAMVVIMLY CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH RSEGLWPAPKHEDRIAKLAKRGGKKPVRA HCCCCCCCCCCHHHHHHHHHCCCCCCCCC >Mature Secondary Structure TSIQPIETSASLVEERHPAKTATVGILIAAFVIAAPLVIGAAGGNYWVRVLDFAMLYVM CCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH LALGLNVVVGFAGLLDLGYIAFYAVGAYTAALLSSPHLTSHFDWIAQMVPGGLHVPFLLI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHH VPIAMALAAIFGILLGAPTLRLRGDYLAIVTLGFGEIVRIFMNNLDRPVNVTNGPQGITG HHHHHHHHHHHHHHHCCCCEEECCCEEEEEEHHHHHHHHHHHHCCCCCCCCCCCCCCCCC IDPVQVAGFNLSQTHEIFGFSLPSVYMYYYLFVLCALLVIWVCTRLQHSRIGRAWAAIRE CCCHHCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DEIAAKAMGINTRNVKLLAFAMGASFGGLSGAMFGAFQGFVSPESFTFWESVVVLACVVL HHHHHHHHCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH GGMGHIPGVILGAVLLAVFPEFLRSTMSPLQHMLFGHDIVDTEVIRQALYGLAMVVIMLY CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH RSEGLWPAPKHEDRIAKLAKRGGKKPVRA HCCCCCCCCCCHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-valine [Periplasm]; H2O; ATP; L-iso-leucine [Periplasm]; L-leucine [Periplasm] [C]
Specific reaction: ATP + L-valine [Periplasm] + H2O = ADP + phosphate + L-valine [Cytoplasm] ATP + L-iso-leucine [Periplasm] + H2O = ADP + phosphate + L-iso-leucine [Cytoplasm] ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 2120183; 10984043 [H]