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The map label for this gene is rdoA [H]

Identifier: 126454046

GI number: 126454046

Start: 207385

End: 208416

Strand: Direct

Name: rdoA [H]

Synonym: BURPS1106A_0224

Alternate gene names: 126454046

Gene position: 207385-208416 (Clockwise)

Preceding gene: 126453733

Following gene: 126453931

Centisome position: 5.2

GC content: 69.09

Gene sequence:

>1032_bases
ATGAACGACGCCACTTCCGAATCCAACGCAGCCGGCGCTTGCGCCGGCTTGCCTTTTGCAGGGCTCACGCCGGAGCGCGT
GCTCGACGCACTCGACAGCGTGCTGATTCCCGCCGGTTCGCGCACCGACGGGCGCCTGCTCGCGCTCAACAGCTACGAAA
ACCGCGTCTATCAGGCCGGCATCGAGGACGGCGCGCCGATCGTCGCGAAATTCTATCGTCCGCAGCGCTGGTCGAACGAC
GCGATCCTCGAAGAGCATACGTTCGTCGCCGAGCTGGCCGCGCGCGAGATTCCGGCCGTGCCGCCGCTCGCCTTCGACGG
CCGCACCCTGCACGAATTCGACGGTTTTCGCTTCGCGATCTTCGAGCGGCGCGGCGGGCGCGCGCCGGAGCTCGACCGGC
GCGATACGCTCGAATGGCTCGGCCGCTTCATCGGGCGCATCCACGCGGTCGGCGCGACCAAGCCGTACGCCGCGCGGCCG
ACGCTCGACCTCCGCACGTTCGGCTACGAGCCGCGCGATTTCCTGATGTCGCACGACTTCGTGCCGGACGACGTTCGGCC
TGCTTACGAAGCGGCGGTCGCGCTCGCGCTGGAAGGCGTCGAGCGCGCGTACGAGCGCGCGGGCGACGTGCGGATATTGC
GCGCGCATGGCGACTGCCATCCGAGCAACGTGCTGTGGACCGACGCGGGCCCGCACTTCGTCGATTTCGACGACAGCCGG
ATGGCGCCCGCCGTGCAGGATCTGTGGCTGCTCCTGCCCGGAGACCGGCCGGGCGCGTCGCGCGCGCTCACCGATCTGCT
CGCGGGCTACGAGGACTTCTGCGAATTCGATCCGCGCGAGCTGCATCTGATCGAGGCGCTGCGCACGCTGCGGCTCATCC
ATTACGCGGCGTGGCTCGCGCGCCGCTGGGACGATCCCGCGTTCCCCGCCGCGTTTCCGTGGTTCAACACGCATCGCTAT
TGGGAAGCGCGCGTGCTCGAATTGCGCGAGCAGATCGGCGCGATGCAGGAAGGGCCGTTGTGGCCCGTGTGA

Upstream 100 bases:

>100_bases
CTCGAGGATCTGATCGACACCGGCGAATCCGTGCTCCCCGCGGGCGCGGCGCTGCACTGAGCGCTCGTCTTTCGGCTCCG
CGCGCGGCACAATGCGGAGC

Downstream 100 bases:

>100_bases
TGCCGCGCTCGGGTGCGCAGCGAGCGCGGCGCCCGTTCGGGCGGCATCGCCCGCGCGCGCCGCGTGCATGGCCGGCGACG
TGATGCGCGGCAGGGCCGCC

Product: serine/threonine protein kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 343; Mature: 343

Protein sequence:

>343_residues
MNDATSESNAAGACAGLPFAGLTPERVLDALDSVLIPAGSRTDGRLLALNSYENRVYQAGIEDGAPIVAKFYRPQRWSND
AILEEHTFVAELAAREIPAVPPLAFDGRTLHEFDGFRFAIFERRGGRAPELDRRDTLEWLGRFIGRIHAVGATKPYAARP
TLDLRTFGYEPRDFLMSHDFVPDDVRPAYEAAVALALEGVERAYERAGDVRILRAHGDCHPSNVLWTDAGPHFVDFDDSR
MAPAVQDLWLLLPGDRPGASRALTDLLAGYEDFCEFDPRELHLIEALRTLRLIHYAAWLARRWDDPAFPAAFPWFNTHRY
WEARVLELREQIGAMQEGPLWPV

Sequences:

>Translated_343_residues
MNDATSESNAAGACAGLPFAGLTPERVLDALDSVLIPAGSRTDGRLLALNSYENRVYQAGIEDGAPIVAKFYRPQRWSND
AILEEHTFVAELAAREIPAVPPLAFDGRTLHEFDGFRFAIFERRGGRAPELDRRDTLEWLGRFIGRIHAVGATKPYAARP
TLDLRTFGYEPRDFLMSHDFVPDDVRPAYEAAVALALEGVERAYERAGDVRILRAHGDCHPSNVLWTDAGPHFVDFDDSR
MAPAVQDLWLLLPGDRPGASRALTDLLAGYEDFCEFDPRELHLIEALRTLRLIHYAAWLARRWDDPAFPAAFPWFNTHRY
WEARVLELREQIGAMQEGPLWPV
>Mature_343_residues
MNDATSESNAAGACAGLPFAGLTPERVLDALDSVLIPAGSRTDGRLLALNSYENRVYQAGIEDGAPIVAKFYRPQRWSND
AILEEHTFVAELAAREIPAVPPLAFDGRTLHEFDGFRFAIFERRGGRAPELDRRDTLEWLGRFIGRIHAVGATKPYAARP
TLDLRTFGYEPRDFLMSHDFVPDDVRPAYEAAVALALEGVERAYERAGDVRILRAHGDCHPSNVLWTDAGPHFVDFDDSR
MAPAVQDLWLLLPGDRPGASRALTDLLAGYEDFCEFDPRELHLIEALRTLRLIHYAAWLARRWDDPAFPAAFPWFNTHRY
WEARVLELREQIGAMQEGPLWPV

Specific function: Probably involved in the extracytoplasmic stress response [H]

COG id: COG2334

COG function: function code R; Putative homoserine kinase type II (protein kinase fold)

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rdoA family [H]

Homologues:

Organism=Escherichia coli, GI1790290, Length=326, Percent_Identity=44.1717791411043, Blast_Score=279, Evalue=1e-76,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002575
- InterPro:   IPR011009 [H]

Pfam domain/function: PF01636 APH [H]

EC number: NA

Molecular weight: Translated: 38607; Mature: 38607

Theoretical pI: Translated: 4.88; Mature: 4.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDATSESNAAGACAGLPFAGLTPERVLDALDSVLIPAGSRTDGRLLALNSYENRVYQAG
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHEECCCCCCCCEEEEEECCCCHHEECC
IEDGAPIVAKFYRPQRWSNDAILEEHTFVAELAAREIPAVPPLAFDGRTLHEFDGFRFAI
CCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCEEEEE
FERRGGRAPELDRRDTLEWLGRFIGRIHAVGATKPYAARPTLDLRTFGYEPRDFLMSHDF
EECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCHHHHHHCCCC
VPDDVRPAYEAAVALALEGVERAYERAGDVRILRAHGDCHPSNVLWTDAGPHFVDFDDSR
CCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCEEEECCCCCEECCCCCC
MAPAVQDLWLLLPGDRPGASRALTDLLAGYEDFCEFDPRELHLIEALRTLRLIHYAAWLA
CCHHHHHEEEEECCCCCCHHHHHHHHHHCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
RRWDDPAFPAAFPWFNTHRYWEARVLELREQIGAMQEGPLWPV
HHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MNDATSESNAAGACAGLPFAGLTPERVLDALDSVLIPAGSRTDGRLLALNSYENRVYQAG
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHEECCCCCCCCEEEEEECCCCHHEECC
IEDGAPIVAKFYRPQRWSNDAILEEHTFVAELAAREIPAVPPLAFDGRTLHEFDGFRFAI
CCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCEEEEE
FERRGGRAPELDRRDTLEWLGRFIGRIHAVGATKPYAARPTLDLRTFGYEPRDFLMSHDF
EECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCHHHHHHCCCC
VPDDVRPAYEAAVALALEGVERAYERAGDVRILRAHGDCHPSNVLWTDAGPHFVDFDDSR
CCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCEEEECCCCCEECCCCCC
MAPAVQDLWLLLPGDRPGASRALTDLLAGYEDFCEFDPRELHLIEALRTLRLIHYAAWLA
CCHHHHHEEEEECCCCCCHHHHHHHHHHCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
RRWDDPAFPAAFPWFNTHRYWEARVLELREQIGAMQEGPLWPV
HHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]