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The map label for this gene is ydiS [C]

Identifier: 126453991

GI number: 126453991

Start: 1675272

End: 1677017

Strand: Reverse

Name: ydiS [C]

Synonym: BURPS1106A_1715

Alternate gene names: 126453991

Gene position: 1677017-1675272 (Counterclockwise)

Preceding gene: 126451507

Following gene: 126452763

Centisome position: 42.05

GC content: 64.72

Gene sequence:

>1746_bases
TTGCGGCAAGCGTTTTATTTCGCCGACAATACGGTCCCGAATAAAAGCATTCTAATGGTTAGAGGAGCGTTCATGACCCC
CGCAAGCCTCATCGAGCAATACGGCCCGCGCGAATCGATGGAATACGACGTCGTGATCGTCGGCGGCGGCCCCGCAGGCC
TGTCGGCGGCCATCCGGCTCAAGCAGCTCGCCGCCGAGAAAGGTGCGGAAATCGGCGTGTGCGTGCTCGAAAAGGGCTCG
GAGATCGGCGCGCACATCCTGTCGGGCGCCGTGATGGACCCGCGCGCGATCACCGAACTGTTCCCCGACTGGAAGGAAAA
GGGGGCGCCGCTCAACGTCGACGTCACCGAGGACCGCTTCCTGTTCCTGACCGAGAAAAGCTCGTTCCAGGTGCCCAACT
GGGCACTGCCGGACAATTTCAAGAACCACGGCAATTACGTGATCAGCCTCGGCAACGTCACGCGCTGGCTCGGCCAGCAG
GCGGAAGCCCTGGGCGTCGAGATCTTCCCGGGCTTCCCGGCCGCCGAGATCCTCTACAACGACGACGGCTCGGTCAAGGG
CGTCGCGACGGGCAACATGGGCGTCGGCAAGGACGGCGAGCCGACCGAGAACTTCCAGCTCGGCATGGAGCTGCACGCGA
AGTACACGCTCTTTTGCGAAGGCGCGCGCGGCCACCTCGGCCGCCAGTTGATGGACAAGTTCAAGCTGAACGCGAACAGC
GACCCGCAGGCGTACGGGATCGGCATCAAGGAGCTGTGGGAGATCGATCCGGTCAAGCACAAGCCGGGCCTCGTGATCCA
CACGGCCGGCTGGCCGCTGTCGTCGGACACGTACGGCGGCTCGTTCCTGTATCACATGGACAACAATCAGGTCGTCGTCG
GCTTCGTCGTCGGCCTCGCGTACTCGAACCCGTACCTGTCGCCGTTCGAGGAGTTCCAGCGCTACAAGACGCATCCGGCG
ATCCGGCCGTTCCTCGAAGGCGGCAAGCGCGTGTCGTACGGCGCGCGCGCGATCACCGCGGGCGGCCTGCTGTCGCTGCC
GAAGACGGTGTTCCCGGGCGGCGCGCTCGTCGGCGACGACGCGGGCTTCCTGAACGCGTCGCGGATCAAGGGCAGCCATG
CGGCGATCAAGACCGGCATGCTCGCCGCCGAAGCCGCGTTCGACGCGGTGCAGGCGGGCCGCCAGGCCGACGAACTGACC
GCTTACCCGGACGCGTTCAAGACGTCCTGGCTGCACACCGAGCTCTATCGCGCGCGCAACTTCAAGCAGTGGATGGGCAA
GGGGCTGTATCTCGGCACGCTGATGGTCGGCGTCGAGCAGAAGCTGATGAACGGCAACGTGCCGTGGACGCTGCATCACC
AGCACGGCGACCACGAGATGCTGAAGCCCGCGTCGCAGTGCCAGCCGATCGACTATCCGAAGCCGGACGGCAAGCTGACG
TTCGACCGGCTGTCGTCGGTATTCATCTCGAACACGAACCATGAGGAAAACCAGCCCGCGCACCTGACGCTGAAGGACGC
GAGCGTGCCGGTCAACGTCAATCTGCGCACGTATGCGGGGCCGGAAGCGCGCTTCTGCCCGGCCGCCGTCTATGAATTCG
TGAAGAACGACGACGGCAGCGACCGCCTCGTGATCAACGCGCAGAACTGCGTGCACTGCAAGACCTGCGACATCAAGGAT
CCGACGCAGAACATCGTGTGGGTCACGCCGGAAGGCGGCGGCGGGCCGAACTACCCGAACATGTGA

Upstream 100 bases:

>100_bases
CTCTTTGTTCCGATGACAACATGCCGCACCAGTATGAACCGTTCCCGTGTGCGACCCAATCCAAAAAATAGAACGATCGT
GCTAATCTAGGATTCCGCTG

Downstream 100 bases:

>100_bases
GCGTTCGCCCGCGCCTCGCGCGGGCCGGTCGCGCCGCCCCGCACGAGGCGGCGAAGCGAAAAAAACGGGCGCCTCATGAA
CTGAACCCCAAGAGTTGGAC

Product: electron transfer flavoprotein-ubiquinone oxidoreductase

Products: NA

Alternate protein names: ETF-QO; ETF-ubiquinone oxidoreductase; Electron-transferring-flavoprotein dehydrogenase; ETF dehydrogenase [H]

Number of amino acids: Translated: 581; Mature: 581

Protein sequence:

>581_residues
MRQAFYFADNTVPNKSILMVRGAFMTPASLIEQYGPRESMEYDVVIVGGGPAGLSAAIRLKQLAAEKGAEIGVCVLEKGS
EIGAHILSGAVMDPRAITELFPDWKEKGAPLNVDVTEDRFLFLTEKSSFQVPNWALPDNFKNHGNYVISLGNVTRWLGQQ
AEALGVEIFPGFPAAEILYNDDGSVKGVATGNMGVGKDGEPTENFQLGMELHAKYTLFCEGARGHLGRQLMDKFKLNANS
DPQAYGIGIKELWEIDPVKHKPGLVIHTAGWPLSSDTYGGSFLYHMDNNQVVVGFVVGLAYSNPYLSPFEEFQRYKTHPA
IRPFLEGGKRVSYGARAITAGGLLSLPKTVFPGGALVGDDAGFLNASRIKGSHAAIKTGMLAAEAAFDAVQAGRQADELT
AYPDAFKTSWLHTELYRARNFKQWMGKGLYLGTLMVGVEQKLMNGNVPWTLHHQHGDHEMLKPASQCQPIDYPKPDGKLT
FDRLSSVFISNTNHEENQPAHLTLKDASVPVNVNLRTYAGPEARFCPAAVYEFVKNDDGSDRLVINAQNCVHCKTCDIKD
PTQNIVWVTPEGGGGPNYPNM

Sequences:

>Translated_581_residues
MRQAFYFADNTVPNKSILMVRGAFMTPASLIEQYGPRESMEYDVVIVGGGPAGLSAAIRLKQLAAEKGAEIGVCVLEKGS
EIGAHILSGAVMDPRAITELFPDWKEKGAPLNVDVTEDRFLFLTEKSSFQVPNWALPDNFKNHGNYVISLGNVTRWLGQQ
AEALGVEIFPGFPAAEILYNDDGSVKGVATGNMGVGKDGEPTENFQLGMELHAKYTLFCEGARGHLGRQLMDKFKLNANS
DPQAYGIGIKELWEIDPVKHKPGLVIHTAGWPLSSDTYGGSFLYHMDNNQVVVGFVVGLAYSNPYLSPFEEFQRYKTHPA
IRPFLEGGKRVSYGARAITAGGLLSLPKTVFPGGALVGDDAGFLNASRIKGSHAAIKTGMLAAEAAFDAVQAGRQADELT
AYPDAFKTSWLHTELYRARNFKQWMGKGLYLGTLMVGVEQKLMNGNVPWTLHHQHGDHEMLKPASQCQPIDYPKPDGKLT
FDRLSSVFISNTNHEENQPAHLTLKDASVPVNVNLRTYAGPEARFCPAAVYEFVKNDDGSDRLVINAQNCVHCKTCDIKD
PTQNIVWVTPEGGGGPNYPNM
>Mature_581_residues
MRQAFYFADNTVPNKSILMVRGAFMTPASLIEQYGPRESMEYDVVIVGGGPAGLSAAIRLKQLAAEKGAEIGVCVLEKGS
EIGAHILSGAVMDPRAITELFPDWKEKGAPLNVDVTEDRFLFLTEKSSFQVPNWALPDNFKNHGNYVISLGNVTRWLGQQ
AEALGVEIFPGFPAAEILYNDDGSVKGVATGNMGVGKDGEPTENFQLGMELHAKYTLFCEGARGHLGRQLMDKFKLNANS
DPQAYGIGIKELWEIDPVKHKPGLVIHTAGWPLSSDTYGGSFLYHMDNNQVVVGFVVGLAYSNPYLSPFEEFQRYKTHPA
IRPFLEGGKRVSYGARAITAGGLLSLPKTVFPGGALVGDDAGFLNASRIKGSHAAIKTGMLAAEAAFDAVQAGRQADELT
AYPDAFKTSWLHTELYRARNFKQWMGKGLYLGTLMVGVEQKLMNGNVPWTLHHQHGDHEMLKPASQCQPIDYPKPDGKLT
FDRLSSVFISNTNHEENQPAHLTLKDASVPVNVNLRTYAGPEARFCPAAVYEFVKNDDGSDRLVINAQNCVHCKTCDIKD
PTQNIVWVTPEGGGGPNYPNM

Specific function: Accepts electrons from ETF and reduces ubiquinone [H]

COG id: COG0644

COG function: function code C; Dehydrogenases (flavoproteins)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 4Fe-4S ferredoxin-type domain [H]

Homologues:

Organism=Homo sapiens, GI119703746, Length=556, Percent_Identity=58.8129496402878, Blast_Score=660, Evalue=0.0,
Organism=Escherichia coli, GI1787991, Length=332, Percent_Identity=28.3132530120482, Blast_Score=121, Evalue=1e-28,
Organism=Escherichia coli, GI1786227, Length=331, Percent_Identity=27.7945619335347, Blast_Score=105, Evalue=7e-24,
Organism=Escherichia coli, GI87082155, Length=342, Percent_Identity=25.7309941520468, Blast_Score=85, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI25144720, Length=556, Percent_Identity=56.294964028777, Blast_Score=623, Evalue=1e-178,
Organism=Saccharomyces cerevisiae, GI6324932, Length=592, Percent_Identity=43.9189189189189, Blast_Score=488, Evalue=1e-138,
Organism=Drosophila melanogaster, GI24652256, Length=553, Percent_Identity=60.0361663652803, Blast_Score=663, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR007859
- InterPro:   IPR003042 [H]

Pfam domain/function: PF05187 ETF_QO [H]

EC number: =1.5.5.1 [H]

Molecular weight: Translated: 63482; Mature: 63482

Theoretical pI: Translated: 6.37; Mature: 6.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRQAFYFADNTVPNKSILMVRGAFMTPASLIEQYGPRESMEYDVVIVGGGPAGLSAAIRL
CCCEEEEECCCCCCCEEEEEECCCCCHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHH
KQLAAEKGAEIGVCVLEKGSEIGAHILSGAVMDPRAITELFPDWKEKGAPLNVDVTEDRF
HHHHHHCCCCEEEEEEECCCHHHHHHHCCCCCCHHHHHHHCCCHHHCCCCEEEEECCCEE
LFLTEKSSFQVPNWALPDNFKNHGNYVISLGNVTRWLGQQAEALGVEIFPGFPAAEILYN
EEEECCCCCCCCCCCCCCCCCCCCCEEEEECHHHHHHCCHHHHCCEEEECCCCCEEEEEC
DDGSVKGVATGNMGVGKDGEPTENFQLGMELHAKYTLFCEGARGHLGRQLMDKFKLNANS
CCCCEEEEEECCCCCCCCCCCCCCEEEEEEEEEEEEEEECCCCCHHHHHHHHHHCCCCCC
DPQAYGIGIKELWEIDPVKHKPGLVIHTAGWPLSSDTYGGSFLYHMDNNQVVVGFVVGLA
CCCEECCCHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCCEEEEEECCCCEEEEEEEEHH
YSNPYLSPFEEFQRYKTHPAIRPFLEGGKRVSYGARAITAGGLLSLPKTVFPGGALVGDD
CCCCCCCHHHHHHHHHCCCCHHHHHCCCCEEECCCEEEECCCCHHCCHHHCCCCCEEECC
AGFLNASRIKGSHAAIKTGMLAAEAAFDAVQAGRQADELTAYPDAFKTSWLHTELYRARN
CCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCHHHHHHHHHHHHHHCC
FKQWMGKGLYLGTLMVGVEQKLMNGNVPWTLHHQHGDHEMLKPASQCQPIDYPKPDGKLT
HHHHHCCCEEEEHHHHHHHHHHHCCCCCEEEECCCCCHHHHCCHHHCCCCCCCCCCCCEE
FDRLSSVFISNTNHEENQPAHLTLKDASVPVNVNLRTYAGPEARFCPAAVYEFVKNDDGS
HHHHHHHEEECCCCCCCCCCEEEEECCCCEEEEEEEECCCCCCCCCHHHHHHHHHCCCCC
DRLVINAQNCVHCKTCDIKDPTQNIVWVTPEGGGGPNYPNM
CEEEEECCCEEEEEECCCCCCCCCEEEEEECCCCCCCCCCC
>Mature Secondary Structure
MRQAFYFADNTVPNKSILMVRGAFMTPASLIEQYGPRESMEYDVVIVGGGPAGLSAAIRL
CCCEEEEECCCCCCCEEEEEECCCCCHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHH
KQLAAEKGAEIGVCVLEKGSEIGAHILSGAVMDPRAITELFPDWKEKGAPLNVDVTEDRF
HHHHHHCCCCEEEEEEECCCHHHHHHHCCCCCCHHHHHHHCCCHHHCCCCEEEEECCCEE
LFLTEKSSFQVPNWALPDNFKNHGNYVISLGNVTRWLGQQAEALGVEIFPGFPAAEILYN
EEEECCCCCCCCCCCCCCCCCCCCCEEEEECHHHHHHCCHHHHCCEEEECCCCCEEEEEC
DDGSVKGVATGNMGVGKDGEPTENFQLGMELHAKYTLFCEGARGHLGRQLMDKFKLNANS
CCCCEEEEEECCCCCCCCCCCCCCEEEEEEEEEEEEEEECCCCCHHHHHHHHHHCCCCCC
DPQAYGIGIKELWEIDPVKHKPGLVIHTAGWPLSSDTYGGSFLYHMDNNQVVVGFVVGLA
CCCEECCCHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCCEEEEEECCCCEEEEEEEEHH
YSNPYLSPFEEFQRYKTHPAIRPFLEGGKRVSYGARAITAGGLLSLPKTVFPGGALVGDD
CCCCCCCHHHHHHHHHCCCCHHHHHCCCCEEECCCEEEECCCCHHCCHHHCCCCCEEECC
AGFLNASRIKGSHAAIKTGMLAAEAAFDAVQAGRQADELTAYPDAFKTSWLHTELYRARN
CCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCHHHHHHHHHHHHHHCC
FKQWMGKGLYLGTLMVGVEQKLMNGNVPWTLHHQHGDHEMLKPASQCQPIDYPKPDGKLT
HHHHHCCCEEEEHHHHHHHHHHHCCCCCEEEECCCCCHHHHCCHHHCCCCCCCCCCCCEE
FDRLSSVFISNTNHEENQPAHLTLKDASVPVNVNLRTYAGPEARFCPAAVYEFVKNDDGS
HHHHHHHEEECCCCCCCCCCEEEEECCCCEEEEEEEECCCCCCCCCHHHHHHHHHCCCCC
DRLVINAQNCVHCKTCDIKDPTQNIVWVTPEGGGGPNYPNM
CEEEEECCCEEEEEECCCCCCCCCEEEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]