| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is 126453979
Identifier: 126453979
GI number: 126453979
Start: 1645626
End: 1646243
Strand: Direct
Name: 126453979
Synonym: BURPS1106A_1689
Alternate gene names: NA
Gene position: 1645626-1646243 (Clockwise)
Preceding gene: 126453533
Following gene: 126453724
Centisome position: 41.26
GC content: 73.14
Gene sequence:
>618_bases ATGAAAGTCTTGTGGACGGGGGCGGCGCTGGCGGCCGCACTGTTGTCCGGCTGCGCGTCGGTGACGACGGGCGTCAGCGC ATCGGCGGCGCCGGGGGCCCTTGCGGGCGCGCGCACCTATGATTTCGCGCGAACGGCCACGCAGGCCGGCAATGCGGATT ACCGGCGGGTGGAGACGCTCGTGCGCGGCGAGCTCGCGCAGCGCGGCTTCGAGGAAGCGGCCGGCACGCAGGCCCGCTAT CGCGTGACGATCGCCTATGCGACGCAGCCGGCGTCCGTCGCGCTGACGATGCCGGGCTGCGGCGGCGCGCAGCAGCCGGC GTGCGTCGCGGTCGACGGGCCCGCGCCGTTCGGGCTGCCGTTCGCGGGCACGGTCTACCGTCACGTGCTGACGTTGCGCT TCATCGAGCGCAGCAGCGGCGGCGACGCGTATCGCGTGTCGGCGGCCGTGCAGGATCGCCATCCGGATGCGCTGCTCGCG GCGCCCGTGCTCGTGCGCAGCGCGCTGGCGCGCGTGCCGTTCGCGGACGGCGGCGGTTGGCTGGTGGAAACGAAGAAACG CGATGCCGACGACGCAATGCCCGGCGTCGTATCGGTGAAGCCGGCTCGCTCGAACTGA
Upstream 100 bases:
>100_bases CCGGCGGCGTGACGACACAGGCATTCGGCCGCCCGCGCGAGTGGGGCTCGCGCACGGGCGGATGGCTAGGACGGGGGCGA ACAGCGATATGGGAGAAGCT
Downstream 100 bases:
>100_bases GCGGGCCGGGCCGCGGGGCGGGGAAGGCGGCGGCGCGGTACGCGCCGCCCGCTGCGGGGCTTACCCGTGTTGCGTTTCGC TGCGCGAGCGCAGATACGTT
Product: putative lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 205; Mature: 205
Protein sequence:
>205_residues MKVLWTGAALAAALLSGCASVTTGVSASAAPGALAGARTYDFARTATQAGNADYRRVETLVRGELAQRGFEEAAGTQARY RVTIAYATQPASVALTMPGCGGAQQPACVAVDGPAPFGLPFAGTVYRHVLTLRFIERSSGGDAYRVSAAVQDRHPDALLA APVLVRSALARVPFADGGGWLVETKKRDADDAMPGVVSVKPARSN
Sequences:
>Translated_205_residues MKVLWTGAALAAALLSGCASVTTGVSASAAPGALAGARTYDFARTATQAGNADYRRVETLVRGELAQRGFEEAAGTQARY RVTIAYATQPASVALTMPGCGGAQQPACVAVDGPAPFGLPFAGTVYRHVLTLRFIERSSGGDAYRVSAAVQDRHPDALLA APVLVRSALARVPFADGGGWLVETKKRDADDAMPGVVSVKPARSN >Mature_205_residues MKVLWTGAALAAALLSGCASVTTGVSASAAPGALAGARTYDFARTATQAGNADYRRVETLVRGELAQRGFEEAAGTQARY RVTIAYATQPASVALTMPGCGGAQQPACVAVDGPAPFGLPFAGTVYRHVLTLRFIERSSGGDAYRVSAAVQDRHPDALLA APVLVRSALARVPFADGGGWLVETKKRDADDAMPGVVSVKPARSN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21119; Mature: 21119
Theoretical pI: Translated: 9.49; Mature: 9.49
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVLWTGAALAAALLSGCASVTTGVSASAAPGALAGARTYDFARTATQAGNADYRRVETL CEEEECHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHH VRGELAQRGFEEAAGTQARYRVTIAYATQPASVALTMPGCGGAQQPACVAVDGPAPFGLP HHHHHHHHHHHHHCCCCEEEEEEEEEECCCCEEEEECCCCCCCCCCEEEEECCCCCCCCC FAGTVYRHVLTLRFIERSSGGDAYRVSAAVQDRHPDALLAAPVLVRSALARVPFADGGGW CHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCE LVETKKRDADDAMPGVVSVKPARSN EEECCCCCCCCCCCCEEEECCCCCC >Mature Secondary Structure MKVLWTGAALAAALLSGCASVTTGVSASAAPGALAGARTYDFARTATQAGNADYRRVETL CEEEECHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHH VRGELAQRGFEEAAGTQARYRVTIAYATQPASVALTMPGCGGAQQPACVAVDGPAPFGLP HHHHHHHHHHHHHCCCCEEEEEEEEEECCCCEEEEECCCCCCCCCCEEEEECCCCCCCCC FAGTVYRHVLTLRFIERSSGGDAYRVSAAVQDRHPDALLAAPVLVRSALARVPFADGGGW CHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCE LVETKKRDADDAMPGVVSVKPARSN EEECCCCCCCCCCCCEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA