| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is 126453943
Identifier: 126453943
GI number: 126453943
Start: 3135444
End: 3136400
Strand: Reverse
Name: 126453943
Synonym: BURPS1106A_3217
Alternate gene names: NA
Gene position: 3136400-3135444 (Counterclockwise)
Preceding gene: 126451923
Following gene: 126453928
Centisome position: 78.64
GC content: 67.5
Gene sequence:
>957_bases ATGGCGGGTGACAAGAAATTTGCATCGCAGGCGGATCTGGCCGAGAAGAAGGTGACGTTCGAGCGGCTGTCCGAGCACGC TTACGCCTATACGGCGGAAGGCGATCCGAACACGGGGATCATCGTCGGCGACGACGCGGTGCTCGTCGCCGATACGCAGG CGACGCCCGTGATGGCCGAGGACGTGATCCGCCGGATCCGCGAAGTCACCGACAAGCCGATCAAGTACGTGCTGCTCACG CACTACCACGCGGTGCGCGTGCTGGGTGCGTCCGCCTACGGCGCCGATCATGTGATCGCGAGCCAGGACACGTACGACCT GATCGTCGAGCGCGGCGCGGCGGACATGAAGAGCGAGATCGAGCGCTTTCCGCGCCTGTTCCGCTCGGTCGAGTCGGTGC CGGGCCTCACGTGGCCGACCCTCACGTTCAAGGGCGAGATGACGCTTTGGCTCGGCAAGCTCGAGGTGAAGATCATGCAG TTGGGCCGCGGCCATACGAAGGGCGACACGGTGGTCTGGCTGCCGCAGGAGAAGGTGCTGCTGTCGGGCGACCTCGTCGA GTACGGCGCGACGCCGTACGCGGGCGACGCGTACTTCCAGGACTGGCCGGCGACGCTCGACGCGATCGCGGCGCTCGAGC CCGAGAAGCTCGTGCCGGGCCGCGGCGCCGCGCTGAAGACGCCGCGGGAAGTCGCCGACGGCCTCGCGGGCACGCGCGCG TTCGTGAGCGAGCTGTACGCGAAGGTGAAGGCCGGCGCGGCGGCGGGGCGGGACCTGAACGCGATCTACAAGGAAACGTA CGCGGCGCTGAAGCCGACGTTCGGCGACTGGGTGATCTTCGATCACTGCATGCCGTTCGACGTGACGCGCGCGTTCGACG AGGCCACGCAATACCCGGATCCGCGGATCTGGACGGCCGAGCGCGACAAGGACATGTGGCACACCCTCGAAGGCTGA
Upstream 100 bases:
>100_bases ACTATTCGTAAATCGTGACGTTGACGCAGATCAAGCAATCACACGCGCGGCTTGTCCGACGAAAGCGGCGCATCCCTCAA TACGGAGCAAGGAGCGACAG
Downstream 100 bases:
>100_bases GGCACGGCGGGCGGCGATCATGACCATCGATTATCAGACGCTGAAGTTCGACTATCGCCCGCGCGCGGCGCTCGCCGATG CGGGCGAGCCGCATCCGGCC
Product: metallo-beta-lactamase family protein
Products: NA
Alternate protein names: Beta-Lactamase Domain Protein; Metallo-Beta-Lactamase Family Protein; Beta-Lactamase-Like; Beta Lactamase; Metallo-Beta-Lactamase Superfamily Protein; Cyclase; Metallo-Beta-Lactamase; Beta-Lactamase; Beta-Lactamase-Like Protein; Beta-Lactamase Class B; Alkyl Sulfatase Or Beta-Lactamase; Zn-Dependent Hydrolase; Hydrolase; Zn-Dependent Hydrolase Glyoxylase Family Protein; Dehydrase; Polyketide Cyclase; Metallo-Beta-Lactamase Superfamily; Secreted Hydrolase; Beta Lactamase SoxH-Like Protein; Zn-Dependent Hydrolase Glyoxylase; Zinc-Dependent Hydrolase; Glyoxylase-Like Zinc-Dependent Hydrolase; Na-Translocating NADH-Quinone Reductase Subunit A; SoxH Protein-Like; Metallo-Beta-Lactamase Domain Protein; Cyclase/Dehydrase; Bifunctional HHDD Isomerase/Cyclase/Dehydrase; Beta-Lactamase Domain Containing Protein; Rhodanese Domain Protein
Number of amino acids: Translated: 318; Mature: 317
Protein sequence:
>318_residues MAGDKKFASQADLAEKKVTFERLSEHAYAYTAEGDPNTGIIVGDDAVLVADTQATPVMAEDVIRRIREVTDKPIKYVLLT HYHAVRVLGASAYGADHVIASQDTYDLIVERGAADMKSEIERFPRLFRSVESVPGLTWPTLTFKGEMTLWLGKLEVKIMQ LGRGHTKGDTVVWLPQEKVLLSGDLVEYGATPYAGDAYFQDWPATLDAIAALEPEKLVPGRGAALKTPREVADGLAGTRA FVSELYAKVKAGAAAGRDLNAIYKETYAALKPTFGDWVIFDHCMPFDVTRAFDEATQYPDPRIWTAERDKDMWHTLEG
Sequences:
>Translated_318_residues MAGDKKFASQADLAEKKVTFERLSEHAYAYTAEGDPNTGIIVGDDAVLVADTQATPVMAEDVIRRIREVTDKPIKYVLLT HYHAVRVLGASAYGADHVIASQDTYDLIVERGAADMKSEIERFPRLFRSVESVPGLTWPTLTFKGEMTLWLGKLEVKIMQ LGRGHTKGDTVVWLPQEKVLLSGDLVEYGATPYAGDAYFQDWPATLDAIAALEPEKLVPGRGAALKTPREVADGLAGTRA FVSELYAKVKAGAAAGRDLNAIYKETYAALKPTFGDWVIFDHCMPFDVTRAFDEATQYPDPRIWTAERDKDMWHTLEG >Mature_317_residues AGDKKFASQADLAEKKVTFERLSEHAYAYTAEGDPNTGIIVGDDAVLVADTQATPVMAEDVIRRIREVTDKPIKYVLLTH YHAVRVLGASAYGADHVIASQDTYDLIVERGAADMKSEIERFPRLFRSVESVPGLTWPTLTFKGEMTLWLGKLEVKIMQL GRGHTKGDTVVWLPQEKVLLSGDLVEYGATPYAGDAYFQDWPATLDAIAALEPEKLVPGRGAALKTPREVADGLAGTRAF VSELYAKVKAGAAAGRDLNAIYKETYAALKPTFGDWVIFDHCMPFDVTRAFDEATQYPDPRIWTAERDKDMWHTLEG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35144; Mature: 35013
Theoretical pI: Translated: 4.92; Mature: 4.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGDKKFASQADLAEKKVTFERLSEHAYAYTAEGDPNTGIIVGDDAVLVADTQATPVMAE CCCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCEEECCCEEEEECCCCCCHHHH DVIRRIREVTDKPIKYVLLTHYHAVRVLGASAYGADHVIASQDTYDLIVERGAADMKSEI HHHHHHHHHCCCCCEEHHHHHHHHHHHHCCCCCCCCCEEECCCHHHHHHHCCCHHHHHHH ERFPRLFRSVESVPGLTWPTLTFKGEMTLWLGKLEVKIMQLGRGHTKGDTVVWLPQEKVL HHHHHHHHHHHHCCCCCCCEEEECCCEEEEEHHHEEEEEECCCCCCCCCEEEEECCCCEE LSGDLVEYGATPYAGDAYFQDWPATLDAIAALEPEKLVPGRGAALKTPREVADGLAGTRA ECCCHHHHCCCCCCCCCHHCCCHHHHHHHHHCCCHHCCCCCCCCCCCHHHHHHHHHHHHH FVSELYAKVKAGAAAGRDLNAIYKETYAALKPTFGDWVIFDHCMPFDVTRAFDEATQYPD HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHCCCC PRIWTAERDKDMWHTLEG CCEEECCCCCHHHHCCCC >Mature Secondary Structure AGDKKFASQADLAEKKVTFERLSEHAYAYTAEGDPNTGIIVGDDAVLVADTQATPVMAE CCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCEEECCCEEEEECCCCCCHHHH DVIRRIREVTDKPIKYVLLTHYHAVRVLGASAYGADHVIASQDTYDLIVERGAADMKSEI HHHHHHHHHCCCCCEEHHHHHHHHHHHHCCCCCCCCCEEECCCHHHHHHHCCCHHHHHHH ERFPRLFRSVESVPGLTWPTLTFKGEMTLWLGKLEVKIMQLGRGHTKGDTVVWLPQEKVL HHHHHHHHHHHHCCCCCCCEEEECCCEEEEEHHHEEEEEECCCCCCCCCEEEEECCCCEE LSGDLVEYGATPYAGDAYFQDWPATLDAIAALEPEKLVPGRGAALKTPREVADGLAGTRA ECCCHHHHCCCCCCCCCHHCCCHHHHHHHHHCCCHHCCCCCCCCCCCHHHHHHHHHHHHH FVSELYAKVKAGAAAGRDLNAIYKETYAALKPTFGDWVIFDHCMPFDVTRAFDEATQYPD HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHCCCC PRIWTAERDKDMWHTLEG CCEEECCCCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA