Definition Burkholderia pseudomallei 1106a chromosome I, complete genome.
Accession NC_009076
Length 3,988,455

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The map label for this gene is 126453902

Identifier: 126453902

GI number: 126453902

Start: 1531855

End: 1533279

Strand: Direct

Name: 126453902

Synonym: BURPS1106A_1579

Alternate gene names: NA

Gene position: 1531855-1533279 (Clockwise)

Preceding gene: 126454545

Following gene: 126455138

Centisome position: 38.41

GC content: 70.25

Gene sequence:

>1425_bases
TTGAAGCTGGGTGGCGGCACCGTTCTCGGCACGTTGCTCGCCGCATGCGGGGGCGGTGGCGGGGCGGACGCAGCCGCCGC
CGCGCCGCAGCAGCCGCCGCCCGCGGGGCCGAGCTCGAGCGCGAACGTCGCGATGACGCTGCCGGCCGACGCGCCGCGCA
TCGCTCGCGATTTCGCGGGGCTCAGCATCGAAAAGGCGGCGTTGAGCTATCCGCTGCTGAGCGGCGAGAACGGCAACATG
GTCGGCCTGTTCAACCGGCTCGGCGCCGGCGTGTTGCGCATCGGCGGCAATAGCAGCGACGCGTCCGGCTGGCAGCGCAC
CGGTCCGGACGAGACGTCGGGCGTCATCACGCCCGCCGCCGTGGACCGGCTCGCGAGCTTCGTTCGGGCTTGCCGCTGGC
GCGTGATCTACGGGCTCAATTTCGTCGGCAACGACCCCGCGACGATCGCCGACGAAGCCGCGTATGCGGCCCAAGCGCTG
GGCGTCCAGCTCGCGGGCTTCGAGATCGGCAACGAGCCCGATCTCTACGCGCAGCATGGCCTCGCGCCGAACGCGAACAC
CTATCCGGGCTTCGTGAGCCGCTGGACCACATTCGCGAATGCGATCCGGGCGGCGGTGCCCGATGCGGTGTTCACGGGCC
CGGCGACCGCGTGGAACTATCAGCGTTACACCGTGCCGTTCGCAAGCGATGCAGCGGGCTTGGTGTCGTTGCTGACGCAG
CACCACTACCGCAACCCCGATAGCGCGACGATCGAGGCGATGCTGAGCCCCGATCCGAGCCTCGCGCCGATGCTGCAAGC
GTTGCAGGGTGCGGCGAGCGCGCGCGGCATCGGCTTTCGTCTCGCGGAGACGAACAGCTATTGGGGCGGCGGCAAGCCGG
GCGTGAGCGATGCGCACGCATCCGCGCTCTGGGTGATCAACTTCCTGTTCGCCGTGGCGCAAGGGGGCGCTTCGGGCGTG
AACCTGCATACCGGCGGCGGAGCGTCGTATTCGGCGATCAAGACGAACAAGACCGCCGGGACGGTCGCGGCGATCGGGCC
GGAGTACTACGGCATCTATCTGTTCAACCAGGCCGCGGGCGGGCGACTGATGCAAACCCGCGTCGATTCGGCGGGTACCA
CGCTGTTCGCGCATGCGGTCGCGGCCGACGGCGGCGGCGTGCGCCTCATCCTCGTGAATACCGATGCGAACAGCGGCTAT
GACGTCGCCGTCGATTGCAGCAGCGTGCCGAACGCGCGCGCCGGCATCGTCACGACGCTCGGCGGGCCGTCGCTCGGCAG
CCTGACGGGCACGCAGATCGACGGCGCGACGTTTGCGCTCGACGGGAGCGGGGCGCCGCAGGGCGGCCGGCCGGTCGCTT
GCGTGAACGGCGTGCTCGGCGTGCATGTCGCGTCCGCGAGCGCGTTGCTGGTCGACTTCGCGTGA

Upstream 100 bases:

>100_bases
GGCACGCAAGGCGTTCGTTCTAGAAAGAGTTCGTTACAACGACAGGAGACATAGCATGCCCCACGAATCCCCCCCGTCGT
CGAAATCGCGGCGCCTTGTT

Downstream 100 bases:

>100_bases
GCGGGACGCACGCCGTGCGGCGCGCACGCGCGAACCGAGACGTCTCGCAGCCATCGCTCGCCCATCGGCGCAACGCGGCG
GGCATGCTGCTGCGCGACAA

Product: putative lipoprotein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 474; Mature: 474

Protein sequence:

>474_residues
MKLGGGTVLGTLLAACGGGGGADAAAAAPQQPPPAGPSSSANVAMTLPADAPRIARDFAGLSIEKAALSYPLLSGENGNM
VGLFNRLGAGVLRIGGNSSDASGWQRTGPDETSGVITPAAVDRLASFVRACRWRVIYGLNFVGNDPATIADEAAYAAQAL
GVQLAGFEIGNEPDLYAQHGLAPNANTYPGFVSRWTTFANAIRAAVPDAVFTGPATAWNYQRYTVPFASDAAGLVSLLTQ
HHYRNPDSATIEAMLSPDPSLAPMLQALQGAASARGIGFRLAETNSYWGGGKPGVSDAHASALWVINFLFAVAQGGASGV
NLHTGGGASYSAIKTNKTAGTVAAIGPEYYGIYLFNQAAGGRLMQTRVDSAGTTLFAHAVAADGGGVRLILVNTDANSGY
DVAVDCSSVPNARAGIVTTLGGPSLGSLTGTQIDGATFALDGSGAPQGGRPVACVNGVLGVHVASASALLVDFA

Sequences:

>Translated_474_residues
MKLGGGTVLGTLLAACGGGGGADAAAAAPQQPPPAGPSSSANVAMTLPADAPRIARDFAGLSIEKAALSYPLLSGENGNM
VGLFNRLGAGVLRIGGNSSDASGWQRTGPDETSGVITPAAVDRLASFVRACRWRVIYGLNFVGNDPATIADEAAYAAQAL
GVQLAGFEIGNEPDLYAQHGLAPNANTYPGFVSRWTTFANAIRAAVPDAVFTGPATAWNYQRYTVPFASDAAGLVSLLTQ
HHYRNPDSATIEAMLSPDPSLAPMLQALQGAASARGIGFRLAETNSYWGGGKPGVSDAHASALWVINFLFAVAQGGASGV
NLHTGGGASYSAIKTNKTAGTVAAIGPEYYGIYLFNQAAGGRLMQTRVDSAGTTLFAHAVAADGGGVRLILVNTDANSGY
DVAVDCSSVPNARAGIVTTLGGPSLGSLTGTQIDGATFALDGSGAPQGGRPVACVNGVLGVHVASASALLVDFA
>Mature_474_residues
MKLGGGTVLGTLLAACGGGGGADAAAAAPQQPPPAGPSSSANVAMTLPADAPRIARDFAGLSIEKAALSYPLLSGENGNM
VGLFNRLGAGVLRIGGNSSDASGWQRTGPDETSGVITPAAVDRLASFVRACRWRVIYGLNFVGNDPATIADEAAYAAQAL
GVQLAGFEIGNEPDLYAQHGLAPNANTYPGFVSRWTTFANAIRAAVPDAVFTGPATAWNYQRYTVPFASDAAGLVSLLTQ
HHYRNPDSATIEAMLSPDPSLAPMLQALQGAASARGIGFRLAETNSYWGGGKPGVSDAHASALWVINFLFAVAQGGASGV
NLHTGGGASYSAIKTNKTAGTVAAIGPEYYGIYLFNQAAGGRLMQTRVDSAGTTLFAHAVAADGGGVRLILVNTDANSGY
DVAVDCSSVPNARAGIVTTLGGPSLGSLTGTQIDGATFALDGSGAPQGGRPVACVNGVLGVHVASASALLVDFA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47724; Mature: 47724

Theoretical pI: Translated: 5.88; Mature: 5.88

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLGGGTVLGTLLAACGGGGGADAAAAAPQQPPPAGPSSSANVAMTLPADAPRIARDFAG
CCCCCHHHHHHHHHHHCCCCCCCHHCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHCC
LSIEKAALSYPLLSGENGNMVGLFNRLGAGVLRIGGNSSDASGWQRTGPDETSGVITPAA
CEEEHHHHCCCEEECCCCCEEEEHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCEECHHH
VDRLASFVRACRWRVIYGLNFVGNDPATIADEAAYAAQALGVQLAGFEIGNEPDLYAQHG
HHHHHHHHHHHCEEEEEEEEEECCCCCCHHHHHHHHHHHHCEEEEEEECCCCCCHHHHCC
LAPNANTYPGFVSRWTTFANAIRAAVPDAVFTGPATAWNYQRYTVPFASDAAGLVSLLTQ
CCCCCCCCCHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCEEEEECCCCCHHHHHHHHHH
HHYRNPDSATIEAMLSPDPSLAPMLQALQGAASARGIGFRLAETNSYWGGGKPGVSDAHA
HHCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCHHH
SALWVINFLFAVAQGGASGVNLHTGGGASYSAIKTNKTAGTVAAIGPEYYGIYLFNQAAG
HHHHHHHHHHHHHCCCCCCCEEECCCCCCEEEEECCCCCCEEEEECCCEEEEEEEECCCC
GRLMQTRVDSAGTTLFAHAVAADGGGVRLILVNTDANSGYDVAVDCSSVPNARAGIVTTL
CEEEEEECCCCCCEEEEEEEECCCCCEEEEEEECCCCCCCEEEEECCCCCCCCCCEEEEC
GGPSLGSLTGTQIDGATFALDGSGAPQGGRPVACVNGVLGVHVASASALLVDFA
CCCCCCCCCCCEECCEEEEECCCCCCCCCCCCHHHCCCHHEEECCCCEEEEECC
>Mature Secondary Structure
MKLGGGTVLGTLLAACGGGGGADAAAAAPQQPPPAGPSSSANVAMTLPADAPRIARDFAG
CCCCCHHHHHHHHHHHCCCCCCCHHCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHCC
LSIEKAALSYPLLSGENGNMVGLFNRLGAGVLRIGGNSSDASGWQRTGPDETSGVITPAA
CEEEHHHHCCCEEECCCCCEEEEHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCEECHHH
VDRLASFVRACRWRVIYGLNFVGNDPATIADEAAYAAQALGVQLAGFEIGNEPDLYAQHG
HHHHHHHHHHHCEEEEEEEEEECCCCCCHHHHHHHHHHHHCEEEEEEECCCCCCHHHHCC
LAPNANTYPGFVSRWTTFANAIRAAVPDAVFTGPATAWNYQRYTVPFASDAAGLVSLLTQ
CCCCCCCCCHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCEEEEECCCCCHHHHHHHHHH
HHYRNPDSATIEAMLSPDPSLAPMLQALQGAASARGIGFRLAETNSYWGGGKPGVSDAHA
HHCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCHHH
SALWVINFLFAVAQGGASGVNLHTGGGASYSAIKTNKTAGTVAAIGPEYYGIYLFNQAAG
HHHHHHHHHHHHHCCCCCCCEEECCCCCCEEEEECCCCCCEEEEECCCEEEEEEEECCCC
GRLMQTRVDSAGTTLFAHAVAADGGGVRLILVNTDANSGYDVAVDCSSVPNARAGIVTTL
CEEEEEECCCCCCEEEEEEEECCCCCEEEEEEECCCCCCCEEEEECCCCCCCCCCEEEEC
GGPSLGSLTGTQIDGATFALDGSGAPQGGRPVACVNGVLGVHVASASALLVDFA
CCCCCCCCCCCEECCEEEEECCCCCCCCCCCCHHHCCCHHEEECCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA