| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is livK [C]
Identifier: 126453860
GI number: 126453860
Start: 2765569
End: 2766717
Strand: Direct
Name: livK [C]
Synonym: BURPS1106A_2807
Alternate gene names: 126453860
Gene position: 2765569-2766717 (Clockwise)
Preceding gene: 126453043
Following gene: 126452017
Centisome position: 69.34
GC content: 67.62
Gene sequence:
>1149_bases ATGAGACTCCGCTCGTCACTGCCCTCCCTCGCCCTCGCCGCGGCATTCGCGTGCGGCGCAACCGGCGCCGCGCGCGCCGC CGACGAAACGCCCGTGAGGATCGGCTTCGCCGCGCCGCTCACGGGCGTCAACGCGGGCTACGGCAAGGATCTGCAAAACG GCGTGCAGCTCGCGCTCGACGACGCCCGCGCGCAAAAGATCACGATCGCCGGCAAGCCCGCGCGCCTCGAACTCGTCGTC GAGGACGACCAGGCCGATCCGCGGATCGGCGTGCAGGCCGCGCAGAGCCTCGTCGACAAAAAGGTGTCGGTCGTCGTCGG CCACTTCAACTCCGGCACGACGATTCCGGCGTCGGTCGTCTACGACAAGGCGGGCATCCCCGTCATCGATCCGGCCGCGA CGAATCCCGTCATCACGTCGCGCGGGCTCGCGAACGTGTTCATGGTGATCGCCACCGACGGCCAGAACGCCGGCAACGCG GGCCGCTACGCGGTCGACGTGACGAAGGCCAAGCGCATCGCGATCGTCGACGATCGCACCGCGTTCGGCCAGGGCGAAGC CGACGAGTTCGACAAGGCGGTGAAGGCCGCGGGCGCCGCGATCGTCGCGCGCGAGTACACGAGCAACCAGGCGGTCGACT TCCGCGCGCAGATCACGAGCCTCAAGAGCAAGAACGTCGATCTGGTCTTCTTCGGCGGCCTCGATTCGCTCGCGGCGAAC TTCATCAAGCAGATGAAGCAGCTCGGCTTGAACGCGCAGTTCGTCGGCGGCGGCGGCGTGAAGGACGCCGAGTTCATCAA GATCGCGGGCCCCGCAGCGGAAGGCGCGATGGCGTGGGAATACGGCCGGCCGCTCGACCAGTTGCCGCAAGGCAAGGATT TCGAGTCGCGCTTCAAGAAGCGCTTCGGCGTCGACGTGCTGTCGTATGCGCAGTTCGGCTATGACGCGACGTGGGCCGCG ATCAAGGCGATGCAGGCGGCGGGCACGACCGATCCGAGCGGCTATCGGCCCGCGCTGAAGAAGATCGATTTCGAGGGCAT CACCGGCCGCATCTCGTTCGGCGGCGACGGCTCGCTCAAGAGCGGGATGTCGACGCTCTATCAGGTGAAGAGCGGCGCGT GGCAGACGATCGTCACGAAGGGGGGCTGA
Upstream 100 bases:
>100_bases AGCCGGCGCCGCTCCGGCGGCCCGCGACGCGGGCCATGGCGCCGGCCCCGTGCATCCGCGCCACTCGCGTCCCGTTCGTG CATCGCTACAAGGAAAGAAC
Downstream 100 bases:
>100_bases CCGGCCGCCCATGTATGGAGCGGACCGCGCGCGACGCGCTGCACGCGCGCGGCCCGGGTCCCGAACGGCGCGCATCGCGC CCAACCCATGGAGTTTCGAT
Product: putative periplasmic substrate-binding protein
Products: ADP; phosphate; L-leucine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 382; Mature: 382
Protein sequence:
>382_residues MRLRSSLPSLALAAAFACGATGAARAADETPVRIGFAAPLTGVNAGYGKDLQNGVQLALDDARAQKITIAGKPARLELVV EDDQADPRIGVQAAQSLVDKKVSVVVGHFNSGTTIPASVVYDKAGIPVIDPAATNPVITSRGLANVFMVIATDGQNAGNA GRYAVDVTKAKRIAIVDDRTAFGQGEADEFDKAVKAAGAAIVAREYTSNQAVDFRAQITSLKSKNVDLVFFGGLDSLAAN FIKQMKQLGLNAQFVGGGGVKDAEFIKIAGPAAEGAMAWEYGRPLDQLPQGKDFESRFKKRFGVDVLSYAQFGYDATWAA IKAMQAAGTTDPSGYRPALKKIDFEGITGRISFGGDGSLKSGMSTLYQVKSGAWQTIVTKGG
Sequences:
>Translated_382_residues MRLRSSLPSLALAAAFACGATGAARAADETPVRIGFAAPLTGVNAGYGKDLQNGVQLALDDARAQKITIAGKPARLELVV EDDQADPRIGVQAAQSLVDKKVSVVVGHFNSGTTIPASVVYDKAGIPVIDPAATNPVITSRGLANVFMVIATDGQNAGNA GRYAVDVTKAKRIAIVDDRTAFGQGEADEFDKAVKAAGAAIVAREYTSNQAVDFRAQITSLKSKNVDLVFFGGLDSLAAN FIKQMKQLGLNAQFVGGGGVKDAEFIKIAGPAAEGAMAWEYGRPLDQLPQGKDFESRFKKRFGVDVLSYAQFGYDATWAA IKAMQAAGTTDPSGYRPALKKIDFEGITGRISFGGDGSLKSGMSTLYQVKSGAWQTIVTKGG >Mature_382_residues MRLRSSLPSLALAAAFACGATGAARAADETPVRIGFAAPLTGVNAGYGKDLQNGVQLALDDARAQKITIAGKPARLELVV EDDQADPRIGVQAAQSLVDKKVSVVVGHFNSGTTIPASVVYDKAGIPVIDPAATNPVITSRGLANVFMVIATDGQNAGNA GRYAVDVTKAKRIAIVDDRTAFGQGEADEFDKAVKAAGAAIVAREYTSNQAVDFRAQITSLKSKNVDLVFFGGLDSLAAN FIKQMKQLGLNAQFVGGGGVKDAEFIKIAGPAAEGAMAWEYGRPLDQLPQGKDFESRFKKRFGVDVLSYAQFGYDATWAA IKAMQAAGTTDPSGYRPALKKIDFEGITGRISFGGDGSLKSGMSTLYQVKSGAWQTIVTKGG
Specific function: Component of an amino-acid transport system (Potential) [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the leucine-binding protein family [H]
Homologues:
Organism=Escherichia coli, GI1789867, Length=349, Percent_Identity=30.3724928366762, Blast_Score=145, Evalue=5e-36, Organism=Escherichia coli, GI48994941, Length=351, Percent_Identity=29.3447293447293, Blast_Score=140, Evalue=1e-34,
Paralogues:
None
Copy number: 240 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001828 - InterPro: IPR000709 [H]
Pfam domain/function: PF01094 ANF_receptor [H]
EC number: NA
Molecular weight: Translated: 39962; Mature: 39962
Theoretical pI: Translated: 9.53; Mature: 9.53
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00104 EPSP_SYNTHASE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLRSSLPSLALAAAFACGATGAARAADETPVRIGFAAPLTGVNAGYGKDLQNGVQLALD CCCHHHCCHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCHHCCCEEEEE DARAQKITIAGKPARLELVVEDDQADPRIGVQAAQSLVDKKVSVVVGHFNSGTTIPASVV CCCCEEEEEECCCEEEEEEEECCCCCCCHHHHHHHHHHCCCEEEEEEECCCCCCCCHHEE YDKAGIPVIDPAATNPVITSRGLANVFMVIATDGQNAGNAGRYAVDVTKAKRIAIVDDRT ECCCCCCEECCCCCCCCEECCCCCEEEEEEEECCCCCCCCCCEEEEEECCCEEEEEECCC AFGQGEADEFDKAVKAAGAAIVAREYTSNQAVDFRAQITSLKSKNVDLVFFGGLDSLAAN CCCCCCHHHHHHHHHHCCCEEEEEECCCCCCEEHHHHHHHHCCCCCCEEEECCHHHHHHH FIKQMKQLGLNAQFVGGGGVKDAEFIKIAGPAAEGAMAWEYGRPLDQLPQGKDFESRFKK HHHHHHHHCCCEEEECCCCCCCCEEEEEECCCCCCCEEECCCCCHHHCCCCCCHHHHHHH RFGVDVLSYAQFGYDATWAAIKAMQAAGTTDPSGYRPALKKIDFEGITGRISFGGDGSLK HHCCHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCEEEEEECCCCCHH SGMSTLYQVKSGAWQTIVTKGG HHHHHHHHHHCCCEEEEEECCC >Mature Secondary Structure MRLRSSLPSLALAAAFACGATGAARAADETPVRIGFAAPLTGVNAGYGKDLQNGVQLALD CCCHHHCCHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCHHCCCEEEEE DARAQKITIAGKPARLELVVEDDQADPRIGVQAAQSLVDKKVSVVVGHFNSGTTIPASVV CCCCEEEEEECCCEEEEEEEECCCCCCCHHHHHHHHHHCCCEEEEEEECCCCCCCCHHEE YDKAGIPVIDPAATNPVITSRGLANVFMVIATDGQNAGNAGRYAVDVTKAKRIAIVDDRT ECCCCCCEECCCCCCCCEECCCCCEEEEEEEECCCCCCCCCCEEEEEECCCEEEEEECCC AFGQGEADEFDKAVKAAGAAIVAREYTSNQAVDFRAQITSLKSKNVDLVFFGGLDSLAAN CCCCCCHHHHHHHHHHCCCEEEEEECCCCCCEEHHHHHHHHCCCCCCEEEECCHHHHHHH FIKQMKQLGLNAQFVGGGGVKDAEFIKIAGPAAEGAMAWEYGRPLDQLPQGKDFESRFKK HHHHHHHHCCCEEEECCCCCCCCEEEEEECCCCCCCEEECCCCCHHHCCCCCCHHHHHHH RFGVDVLSYAQFGYDATWAAIKAMQAAGTTDPSGYRPALKKIDFEGITGRISFGGDGSLK HHCCHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCEEEEEECCCCCHH SGMSTLYQVKSGAWQTIVTKGG HHHHHHHHHHCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-leucine [Periplasm]; H2O [C]
Specific reaction: ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA