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The map label for this gene is pcp [H]

Identifier: 126453833

GI number: 126453833

Start: 3412845

End: 3413318

Strand: Direct

Name: pcp [H]

Synonym: BURPS1106A_3509

Alternate gene names: 126453833

Gene position: 3412845-3413318 (Clockwise)

Preceding gene: 126452743

Following gene: 126451831

Centisome position: 85.57

GC content: 73.84

Gene sequence:

>474_bases
ATGTTGACCAGGAAAACCCTCACGCTCGCCGCGATGCTGACCGCGACGGTGACGCTCGCAGGCTGCTTCACGCCGCCGGG
TTCCGCCGATGTCTATAGCGTCGGCCAGGCGCAGCGCGAACAGACCGTGCGGATGGGCACGGTGGAAAGCGTCCGCGCGG
TGCGGATTCAGGGCGACGGCGGCGGCAGCGCGCTCGGCACGCTCGGCGGCGGCGCGCTCGGCGCGGTCGCCGGCAGCGCG
ATCGGCGGCGGCCGCGGCTCGGTGCTGACCGCGATCGCGGGCGGCATCGCCGGCGCGGTGGCCGGCAACGCGGTCGGCCA
GGGCCTCAGCTCGGCGAACGGCGTCGAAATCACCGTGCGCCTCGACAACGGCGACCTGCGCTCGATCACGCAGGCGGCGA
CGCCCGAAGTGTTCCGCGCGGGCGAACGCGTGCGACTGCTGTCGAGCGGCGGCGTGACTCGCGTCACGCACTGA

Upstream 100 bases:

>100_bases
GTCCGCAGACGTACGCGCCGACCCGCGCGGAAATCGACGCGCGCTTCGAGACCGCGTTCGGCTACAGTCCGAAGTGAATC
TTGTTTGGAGAAGATGAAAC

Downstream 100 bases:

>100_bases
CCGGTCGGCGGCGCCGGCGGCCTCGTCCGGCGTACCGGCCCACGCGGTGCGGCGCACGCCGCACGTACGGAAAACGCATG
CGCAGTTTTGCGCATGCGTT

Product: outer membrane lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 157; Mature: 157

Protein sequence:

>157_residues
MLTRKTLTLAAMLTATVTLAGCFTPPGSADVYSVGQAQREQTVRMGTVESVRAVRIQGDGGGSALGTLGGGALGAVAGSA
IGGGRGSVLTAIAGGIAGAVAGNAVGQGLSSANGVEITVRLDNGDLRSITQAATPEVFRAGERVRLLSSGGVTRVTH

Sequences:

>Translated_157_residues
MLTRKTLTLAAMLTATVTLAGCFTPPGSADVYSVGQAQREQTVRMGTVESVRAVRIQGDGGGSALGTLGGGALGAVAGSA
IGGGRGSVLTAIAGGIAGAVAGNAVGQGLSSANGVEITVRLDNGDLRSITQAATPEVFRAGERVRLLSSGGVTRVTH
>Mature_157_residues
MLTRKTLTLAAMLTATVTLAGCFTPPGSADVYSVGQAQREQTVRMGTVESVRAVRIQGDGGGSALGTLGGGALGAVAGSA
IGGGRGSVLTAIAGGIAGAVAGNAVGQGLSSANGVEITVRLDNGDLRSITQAATPEVFRAGERVRLLSSGGVTRVTH

Specific function: Facilitates ferrioxamine uptake [H]

COG id: COG3133

COG function: function code M; Outer membrane lipoprotein

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pcp/slyB lipoprotein family [H]

Homologues:

Organism=Escherichia coli, GI48994887, Length=135, Percent_Identity=37.7777777777778, Blast_Score=68, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008816 [H]

Pfam domain/function: PF05433 Rick_17kDa_Anti [H]

EC number: NA

Molecular weight: Translated: 15363; Mature: 15363

Theoretical pI: Translated: 11.08; Mature: 11.08

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTRKTLTLAAMLTATVTLAGCFTPPGSADVYSVGQAQREQTVRMGTVESVRAVRIQGDG
CCCCHHHHHHHHHHHHHHHEECCCCCCCCCEEECCHHHHHHHHHHCCCCCEEEEEEECCC
GGSALGTLGGGALGAVAGSAIGGGRGSVLTAIAGGIAGAVAGNAVGQGLSSANGVEITVR
CCCEEECCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEE
LDNGDLRSITQAATPEVFRAGERVRLLSSGGVTRVTH
ECCCCHHHHHHHCCHHHHHCCCEEEEEECCCEEECCC
>Mature Secondary Structure
MLTRKTLTLAAMLTATVTLAGCFTPPGSADVYSVGQAQREQTVRMGTVESVRAVRIQGDG
CCCCHHHHHHHHHHHHHHHEECCCCCCCCCEEECCHHHHHHHHHHCCCCCEEEEEEECCC
GGSALGTLGGGALGAVAGSAIGGGRGSVLTAIAGGIAGAVAGNAVGQGLSSANGVEITVR
CCCEEECCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEE
LDNGDLRSITQAATPEVFRAGERVRLLSSGGVTRVTH
ECCCCHHHHHHHCCHHHHHCCCEEEEEECCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1732192 [H]