| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
Click here to switch to the map view.
The map label for this gene is 126453792
Identifier: 126453792
GI number: 126453792
Start: 2405764
End: 2406165
Strand: Reverse
Name: 126453792
Synonym: BURPS1106A_2447
Alternate gene names: NA
Gene position: 2406165-2405764 (Counterclockwise)
Preceding gene: 126454693
Following gene: 126453762
Centisome position: 60.33
GC content: 59.45
Gene sequence:
>402_bases TTGGTCGTGCTGTGGTCGTTGATTGTATTGCCCAAGCGTGAGCGTCAGGCCGCCCGTGCGGCTAGCGCCGACGGCGAGAC TCAGGCCGAGATGTTCGCGGGCGATCGCCCGATGCCGAGTGCAGTTTCGGTGAGTCCCCTTGTTTCCTATAAGGCTTTGC TGGCTGACTTCGGTACGCAATTGGGCAAGAAGACCCGCATGGATGTCAATCTGAAGCGGCTGGAAACGCACGGGTTCATT ACTCGTCGCGGTGATGACATCGCTGAAGGACCGTTGCTCGACTTGTTACTTGACTACAACGCGTTGGCGCCACGCATCCT CGACGGCGCGCTTAGCGACGTGCTCGCGCGCACGCGTTCAGAGAGTGCAACGGAAAGTGATTCCCCGGAGGTTCAAGGCT GA
Upstream 100 bases:
>100_bases CAGCGTCGCGCTTTTACGCGGAGCCGAAACATCGGTCTTCGGAGAGTCTGGCTTAGACGCGAATAACAACGTGGACCTCC CGCGTGACGCTGTCTCACTG
Downstream 100 bases:
>100_bases TGTTTCACTTGCAAACGCTCGAGCTACTTCAATGGGACTATTGTCAGCGGATCACACTGCCGCTTGATGGCGCAATCATC ACCGTGGCGGGTCCCAATGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 133; Mature: 133
Protein sequence:
>133_residues MVVLWSLIVLPKRERQAARAASADGETQAEMFAGDRPMPSAVSVSPLVSYKALLADFGTQLGKKTRMDVNLKRLETHGFI TRRGDDIAEGPLLDLLLDYNALAPRILDGALSDVLARTRSESATESDSPEVQG
Sequences:
>Translated_133_residues MVVLWSLIVLPKRERQAARAASADGETQAEMFAGDRPMPSAVSVSPLVSYKALLADFGTQLGKKTRMDVNLKRLETHGFI TRRGDDIAEGPLLDLLLDYNALAPRILDGALSDVLARTRSESATESDSPEVQG >Mature_133_residues MVVLWSLIVLPKRERQAARAASADGETQAEMFAGDRPMPSAVSVSPLVSYKALLADFGTQLGKKTRMDVNLKRLETHGFI TRRGDDIAEGPLLDLLLDYNALAPRILDGALSDVLARTRSESATESDSPEVQG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14411; Mature: 14411
Theoretical pI: Translated: 4.93; Mature: 4.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVVLWSLIVLPKRERQAARAASADGETQAEMFAGDRPMPSAVSVSPLVSYKALLADFGTQ CEEEEEEHHCCCHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHH LGKKTRMDVNLKRLETHGFITRRGDDIAEGPLLDLLLDYNALAPRILDGALSDVLARTRS HCCCCCCCCHHHHHHHCCCEEECCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHC ESATESDSPEVQG CCCCCCCCCCCCC >Mature Secondary Structure MVVLWSLIVLPKRERQAARAASADGETQAEMFAGDRPMPSAVSVSPLVSYKALLADFGTQ CEEEEEEHHCCCHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHH LGKKTRMDVNLKRLETHGFITRRGDDIAEGPLLDLLLDYNALAPRILDGALSDVLARTRS HCCCCCCCCHHHHHHHCCCEEECCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHC ESATESDSPEVQG CCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA