| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is 126453782
Identifier: 126453782
GI number: 126453782
Start: 2894227
End: 2894829
Strand: Reverse
Name: 126453782
Synonym: BURPS1106A_2950
Alternate gene names: NA
Gene position: 2894829-2894227 (Counterclockwise)
Preceding gene: 126453773
Following gene: 126454949
Centisome position: 72.58
GC content: 62.85
Gene sequence:
>603_bases GTGATGATGCAAAAACGATTCAAGCAACTGGTCCTGCTGGCGGCGATGGTTCCGGCATTCGCGATGGCGCAATCGCTGTC GAACCAGACTTCGGCTCCGGCGGCCGCTGCTCCGATCGACGCGGACAAGAAGGCGGCGATCAAGGATCTGCTCGACGCAA TCGACGCGCCGAAGCTCGTGTCGGCGATCGCGAACAGCGCCGAGATGCAATCGAAGCAACTCGTGCCGGCGATCCTCTCG GACGCGCTGTCGGAGAACAAGACGCTGAACGACAAGCAGAAGCAGGCCGCCGTGCCGACGCTGCAGAAGAACGCGGTGCC GAAGCTGGTCGACGGCGCGGGCAAGGTGTTCGGCACGCAGCAGTTCACGAACGACGCGATGCAGGCTCAGTACGACGCGT ACGCGAAGTACTACAGCACGTCGGAGATCAAGGATCTGACGACGTTCTACAAGAGCCCGACGGGCCGCAAGTTCATCCAG GTCCAGGACCAGGTCGGCCGCGACGTCGTGAACGGCCTGATGCAGAAGTACATGCCGCAGGCGATCAAGGCGACGCGCGA CCAGGCCGACAAGGAAGTCGCGGCGGTCAAGCCGGGCAAGTAA
Upstream 100 bases:
>100_bases GCCTGAGTCAGGTTGTGACCGTCGAGCCGGCGCCCGGCGCGCGCGCAAAGAGGTGGCGTGACGGGCGCGGCGTATAAACT GTACATATTTCCATGAGGGA
Downstream 100 bases:
>100_bases GCCGCATCGGCTGAGGCCCGCCGGCCGGGGCGACGTGCGTCGCCCGTGTTTGGCGGGTTCATCAGGACAGTGCGATAATG GCCGTTTGCGCGACAGCGCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 200; Mature: 200
Protein sequence:
>200_residues MMMQKRFKQLVLLAAMVPAFAMAQSLSNQTSAPAAAAPIDADKKAAIKDLLDAIDAPKLVSAIANSAEMQSKQLVPAILS DALSENKTLNDKQKQAAVPTLQKNAVPKLVDGAGKVFGTQQFTNDAMQAQYDAYAKYYSTSEIKDLTTFYKSPTGRKFIQ VQDQVGRDVVNGLMQKYMPQAIKATRDQADKEVAAVKPGK
Sequences:
>Translated_200_residues MMMQKRFKQLVLLAAMVPAFAMAQSLSNQTSAPAAAAPIDADKKAAIKDLLDAIDAPKLVSAIANSAEMQSKQLVPAILS DALSENKTLNDKQKQAAVPTLQKNAVPKLVDGAGKVFGTQQFTNDAMQAQYDAYAKYYSTSEIKDLTTFYKSPTGRKFIQ VQDQVGRDVVNGLMQKYMPQAIKATRDQADKEVAAVKPGK >Mature_200_residues MMMQKRFKQLVLLAAMVPAFAMAQSLSNQTSAPAAAAPIDADKKAAIKDLLDAIDAPKLVSAIANSAEMQSKQLVPAILS DALSENKTLNDKQKQAAVPTLQKNAVPKLVDGAGKVFGTQQFTNDAMQAQYDAYAKYYSTSEIKDLTTFYKSPTGRKFIQ VQDQVGRDVVNGLMQKYMPQAIKATRDQADKEVAAVKPGK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21657; Mature: 21657
Theoretical pI: Translated: 10.04; Mature: 10.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMMQKRFKQLVLLAAMVPAFAMAQSLSNQTSAPAAAAPIDADKKAAIKDLLDAIDAPKLV CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHH SAIANSAEMQSKQLVPAILSDALSENKTLNDKQKQAAVPTLQKNAVPKLVDGAGKVFGTQ HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCHHHHCCCHHHHHHHHHHHCCH QFTNDAMQAQYDAYAKYYSTSEIKDLTTFYKSPTGRKFIQVQDQVGRDVVNGLMQKYMPQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH AIKATRDQADKEVAAVKPGK HHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MMMQKRFKQLVLLAAMVPAFAMAQSLSNQTSAPAAAAPIDADKKAAIKDLLDAIDAPKLV CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHH SAIANSAEMQSKQLVPAILSDALSENKTLNDKQKQAAVPTLQKNAVPKLVDGAGKVFGTQ HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCHHHHCCCHHHHHHHHHHHCCH QFTNDAMQAQYDAYAKYYSTSEIKDLTTFYKSPTGRKFIQVQDQVGRDVVNGLMQKYMPQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH AIKATRDQADKEVAAVKPGK HHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA