| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
Click here to switch to the map view.
The map label for this gene is 126453754
Identifier: 126453754
GI number: 126453754
Start: 2730594
End: 2730992
Strand: Reverse
Name: 126453754
Synonym: BURPS1106A_2767
Alternate gene names: NA
Gene position: 2730992-2730594 (Counterclockwise)
Preceding gene: 126455392
Following gene: 126452515
Centisome position: 68.47
GC content: 63.91
Gene sequence:
>399_bases ATGTTGCAAGCCGGACGAACGCCGAGCGCGTTTTCCGGCGAATGGCGCGCGCTGCGCACCGGTCGCGCGCCGCGTCTTTC TCCCTTCAAGGATCAGGTCATGAACGAGCAGTACGCATCCATCATCGACGTTCGTAGGATTCCTCATCACAAGCGCCATG CGCTGATCTTCGGCACCTTCGATGCGCTGCCCGGCGGCGAAGCGTTGCAACTGATCAACGATCACGATCCGAAGCCGCTC TATTACCAGCTCGAGGAGCGCGCGGCCGATTCGTTCGAATGGACGTATCTGGAAGCGGGGCCGTCGCAGTGGCGCGTGCA GATCGCCAAGCGCGGCGACGCGCTCGGGCATCATGATGCGGGCGATAGCTGCTGCTCGGGCGGCGGCTGCGGCGGTTGA
Upstream 100 bases:
>100_bases GAGTCGCATACGTGGCAAAAAGATGCATGCATTATGTTGCTATTGAGGGTGGTGCGTTATAACATGCTCTGCACATGCAC TTTATATAGTTAACGGCTGC
Downstream 100 bases:
>100_bases CGCACGCGGCGGGGCAGGACGCGGCTCGACGCCCGGGCGGGCGTCGAGCCGCATTAAAACGGCCGCCGCGGGCGCGATGA GCGCGGCATGGCAGCGCGTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 132; Mature: 132
Protein sequence:
>132_residues MLQAGRTPSAFSGEWRALRTGRAPRLSPFKDQVMNEQYASIIDVRRIPHHKRHALIFGTFDALPGGEALQLINDHDPKPL YYQLEERAADSFEWTYLEAGPSQWRVQIAKRGDALGHHDAGDSCCSGGGCGG
Sequences:
>Translated_132_residues MLQAGRTPSAFSGEWRALRTGRAPRLSPFKDQVMNEQYASIIDVRRIPHHKRHALIFGTFDALPGGEALQLINDHDPKPL YYQLEERAADSFEWTYLEAGPSQWRVQIAKRGDALGHHDAGDSCCSGGGCGG >Mature_132_residues MLQAGRTPSAFSGEWRALRTGRAPRLSPFKDQVMNEQYASIIDVRRIPHHKRHALIFGTFDALPGGEALQLINDHDPKPL YYQLEERAADSFEWTYLEAGPSQWRVQIAKRGDALGHHDAGDSCCSGGGCGG
Specific function: Unknown
COG id: COG4309
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14605; Mature: 14605
Theoretical pI: Translated: 7.12; Mature: 7.12
Prosite motif: PS00213 LIPOCALIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLQAGRTPSAFSGEWRALRTGRAPRLSPFKDQVMNEQYASIIDVRRIPHHKRHALIFGTF CCCCCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECC DALPGGEALQLINDHDPKPLYYQLEERAADSFEWTYLEAGPSQWRVQIAKRGDALGHHDA CCCCCCCEEEECCCCCCCCCEEEEHHHCCCCCEEEEEECCCCCEEEEEECCCCCCCCCCC GDSCCSGGGCGG CCCCCCCCCCCC >Mature Secondary Structure MLQAGRTPSAFSGEWRALRTGRAPRLSPFKDQVMNEQYASIIDVRRIPHHKRHALIFGTF CCCCCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECC DALPGGEALQLINDHDPKPLYYQLEERAADSFEWTYLEAGPSQWRVQIAKRGDALGHHDA CCCCCCCEEEECCCCCCCCCEEEEHHHCCCCCEEEEEECCCCCEEEEEECCCCCCCCCCC GDSCCSGGGCGG CCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA