Definition Burkholderia pseudomallei 1106a chromosome I, complete genome.
Accession NC_009076
Length 3,988,455

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The map label for this gene is 126453754

Identifier: 126453754

GI number: 126453754

Start: 2730594

End: 2730992

Strand: Reverse

Name: 126453754

Synonym: BURPS1106A_2767

Alternate gene names: NA

Gene position: 2730992-2730594 (Counterclockwise)

Preceding gene: 126455392

Following gene: 126452515

Centisome position: 68.47

GC content: 63.91

Gene sequence:

>399_bases
ATGTTGCAAGCCGGACGAACGCCGAGCGCGTTTTCCGGCGAATGGCGCGCGCTGCGCACCGGTCGCGCGCCGCGTCTTTC
TCCCTTCAAGGATCAGGTCATGAACGAGCAGTACGCATCCATCATCGACGTTCGTAGGATTCCTCATCACAAGCGCCATG
CGCTGATCTTCGGCACCTTCGATGCGCTGCCCGGCGGCGAAGCGTTGCAACTGATCAACGATCACGATCCGAAGCCGCTC
TATTACCAGCTCGAGGAGCGCGCGGCCGATTCGTTCGAATGGACGTATCTGGAAGCGGGGCCGTCGCAGTGGCGCGTGCA
GATCGCCAAGCGCGGCGACGCGCTCGGGCATCATGATGCGGGCGATAGCTGCTGCTCGGGCGGCGGCTGCGGCGGTTGA

Upstream 100 bases:

>100_bases
GAGTCGCATACGTGGCAAAAAGATGCATGCATTATGTTGCTATTGAGGGTGGTGCGTTATAACATGCTCTGCACATGCAC
TTTATATAGTTAACGGCTGC

Downstream 100 bases:

>100_bases
CGCACGCGGCGGGGCAGGACGCGGCTCGACGCCCGGGCGGGCGTCGAGCCGCATTAAAACGGCCGCCGCGGGCGCGATGA
GCGCGGCATGGCAGCGCGTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 132; Mature: 132

Protein sequence:

>132_residues
MLQAGRTPSAFSGEWRALRTGRAPRLSPFKDQVMNEQYASIIDVRRIPHHKRHALIFGTFDALPGGEALQLINDHDPKPL
YYQLEERAADSFEWTYLEAGPSQWRVQIAKRGDALGHHDAGDSCCSGGGCGG

Sequences:

>Translated_132_residues
MLQAGRTPSAFSGEWRALRTGRAPRLSPFKDQVMNEQYASIIDVRRIPHHKRHALIFGTFDALPGGEALQLINDHDPKPL
YYQLEERAADSFEWTYLEAGPSQWRVQIAKRGDALGHHDAGDSCCSGGGCGG
>Mature_132_residues
MLQAGRTPSAFSGEWRALRTGRAPRLSPFKDQVMNEQYASIIDVRRIPHHKRHALIFGTFDALPGGEALQLINDHDPKPL
YYQLEERAADSFEWTYLEAGPSQWRVQIAKRGDALGHHDAGDSCCSGGGCGG

Specific function: Unknown

COG id: COG4309

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14605; Mature: 14605

Theoretical pI: Translated: 7.12; Mature: 7.12

Prosite motif: PS00213 LIPOCALIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLQAGRTPSAFSGEWRALRTGRAPRLSPFKDQVMNEQYASIIDVRRIPHHKRHALIFGTF
CCCCCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECC
DALPGGEALQLINDHDPKPLYYQLEERAADSFEWTYLEAGPSQWRVQIAKRGDALGHHDA
CCCCCCCEEEECCCCCCCCCEEEEHHHCCCCCEEEEEECCCCCEEEEEECCCCCCCCCCC
GDSCCSGGGCGG
CCCCCCCCCCCC
>Mature Secondary Structure
MLQAGRTPSAFSGEWRALRTGRAPRLSPFKDQVMNEQYASIIDVRRIPHHKRHALIFGTF
CCCCCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECC
DALPGGEALQLINDHDPKPLYYQLEERAADSFEWTYLEAGPSQWRVQIAKRGDALGHHDA
CCCCCCCEEEECCCCCCCCCEEEEHHHCCCCCEEEEEECCCCCEEEEEECCCCCCCCCCC
GDSCCSGGGCGG
CCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA