| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
Click here to switch to the map view.
The map label for this gene is 126453751
Identifier: 126453751
GI number: 126453751
Start: 3504969
End: 3505802
Strand: Direct
Name: 126453751
Synonym: BURPS1106A_3599
Alternate gene names: NA
Gene position: 3504969-3505802 (Clockwise)
Preceding gene: 126454466
Following gene: 126454820
Centisome position: 87.88
GC content: 71.58
Gene sequence:
>834_bases ATGCCCGCCTATCGACGACTCCACGCGCCTCACCCGCGCCTGCGCGACATCGTGAACTGCTATTTCGTCGAGCTCGGGCG CGCGGGCCCGATGCTGTATCCGGCCACGCCGAGCGCGTCGATCACGGTGTTCGCGAGCGGGGCGAGCGTGCACACGAACG GCATCGCGCACGCGGAAACGCTGATGTGCCGCCCGCAGCGCAGCGCGGTCTGGGCGACGCTGCTGCCGGGCACGACGTAC GTGAGCGTCGTGTTCCGCCCCGGGCAGATCCGGCGCGTGATGCCGCGCGGCGCGAGCGCCGCCTACGACGACGGCTCGCC GCTCGACGCGGTGTTCCCGCGTGCGGCGGTGCGCGCGCTCGTCGACGGCGTGCGCGGCGCGCCGACGCTCGGGCATGCGG TCGCGGCGCTGGAAGACTGGCTGATGGCGCAGGCGCACGTCGCCGAAGAATTCGACGCAGGCGGCATCCTGCTGCCGCCC GCCTGCGTGGACGCGCCGCGCGAGGCGCTCGCCGCGCAGTTCAGCCGCAGCCCGCGCCAATTGGAGAGGCTGTTCATCGA CACGTTCGGCGCCTCGCAGCGCGAGATGCGCTCGCTGCTGCGCTATGCGCGCACGCTGTCGCGCCTGATCGCCGCCGATT TCGCGCTGCCCGCGCTGAGCGACATGGCGATCGACTGCGGCTATTACGATCACGCGCAGATGACGCGCGCCTTCCGGCGC TACGCGGGCATGGCGCCCGTGCAGCTCGCGGCCGCGGTGCGCGACGCGAGGCAAGCGTCGATGACGATGTATCGCTACGA ACTCGCGGATAAACGGATTCTGCTCGACGCGTAA
Upstream 100 bases:
>100_bases GCGCTCGTCTACGGTCTGATGCAACTGCAGCGCAAGGTCGCCGAGCGCAGCACGCATAGTCGGCCTAAACTGTTCGCGCG CCCCTGACCGCCGACAATCC
Downstream 100 bases:
>100_bases CGTGCGTTCGGCACGGCCGGCACGTTCGGCGCGGCCAGCGGCGCCGTCACGCGCCGCGCGCCGGTGCCGCGTCACCGCAG GTTAGCGGACACTCGCGACG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 277; Mature: 276
Protein sequence:
>277_residues MPAYRRLHAPHPRLRDIVNCYFVELGRAGPMLYPATPSASITVFASGASVHTNGIAHAETLMCRPQRSAVWATLLPGTTY VSVVFRPGQIRRVMPRGASAAYDDGSPLDAVFPRAAVRALVDGVRGAPTLGHAVAALEDWLMAQAHVAEEFDAGGILLPP ACVDAPREALAAQFSRSPRQLERLFIDTFGASQREMRSLLRYARTLSRLIAADFALPALSDMAIDCGYYDHAQMTRAFRR YAGMAPVQLAAAVRDARQASMTMYRYELADKRILLDA
Sequences:
>Translated_277_residues MPAYRRLHAPHPRLRDIVNCYFVELGRAGPMLYPATPSASITVFASGASVHTNGIAHAETLMCRPQRSAVWATLLPGTTY VSVVFRPGQIRRVMPRGASAAYDDGSPLDAVFPRAAVRALVDGVRGAPTLGHAVAALEDWLMAQAHVAEEFDAGGILLPP ACVDAPREALAAQFSRSPRQLERLFIDTFGASQREMRSLLRYARTLSRLIAADFALPALSDMAIDCGYYDHAQMTRAFRR YAGMAPVQLAAAVRDARQASMTMYRYELADKRILLDA >Mature_276_residues PAYRRLHAPHPRLRDIVNCYFVELGRAGPMLYPATPSASITVFASGASVHTNGIAHAETLMCRPQRSAVWATLLPGTTYV SVVFRPGQIRRVMPRGASAAYDDGSPLDAVFPRAAVRALVDGVRGAPTLGHAVAALEDWLMAQAHVAEEFDAGGILLPPA CVDAPREALAAQFSRSPRQLERLFIDTFGASQREMRSLLRYARTLSRLIAADFALPALSDMAIDCGYYDHAQMTRAFRRY AGMAPVQLAAAVRDARQASMTMYRYELADKRILLDA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30290; Mature: 30159
Theoretical pI: Translated: 9.34; Mature: 9.34
Prosite motif: PS01124 HTH_ARAC_FAMILY_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAYRRLHAPHPRLRDIVNCYFVELGRAGPMLYPATPSASITVFASGASVHTNGIAHAET CCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEEEECCCEEECCCCHHHHH LMCRPQRSAVWATLLPGTTYVSVVFRPGQIRRVMPRGASAAYDDGSPLDAVFPRAAVRAL HHCCCCCCCEEEEECCCCEEEEEEECCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHH VDGVRGAPTLGHAVAALEDWLMAQAHVAEEFDAGGILLPPACVDAPREALAAQFSRSPRQ HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCHHHCCHHHHHHHHHCCCHHH LERLFIDTFGASQREMRSLLRYARTLSRLIAADFALPALSDMAIDCGYYDHAQMTRAFRR HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH YAGMAPVQLAAAVRDARQASMTMYRYELADKRILLDA HCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECC >Mature Secondary Structure PAYRRLHAPHPRLRDIVNCYFVELGRAGPMLYPATPSASITVFASGASVHTNGIAHAET CCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEEEECCCEEECCCCHHHHH LMCRPQRSAVWATLLPGTTYVSVVFRPGQIRRVMPRGASAAYDDGSPLDAVFPRAAVRAL HHCCCCCCCEEEEECCCCEEEEEEECCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHH VDGVRGAPTLGHAVAALEDWLMAQAHVAEEFDAGGILLPPACVDAPREALAAQFSRSPRQ HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCHHHCCHHHHHHHHHCCCHHH LERLFIDTFGASQREMRSLLRYARTLSRLIAADFALPALSDMAIDCGYYDHAQMTRAFRR HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH YAGMAPVQLAAAVRDARQASMTMYRYELADKRILLDA HCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA