| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is glxK [H]
Identifier: 126453749
GI number: 126453749
Start: 2340058
End: 2341221
Strand: Direct
Name: glxK [H]
Synonym: BURPS1106A_2368
Alternate gene names: 126453749
Gene position: 2340058-2341221 (Clockwise)
Preceding gene: 126454283
Following gene: 126452807
Centisome position: 58.67
GC content: 76.46
Gene sequence:
>1164_bases ATGCCGCAGCCCTCGCCCATCGTGGTCATTGCACCCGATTCGTTCAAGGGATCGCTGAGCGCCGAGCAGGTCGCGAACGC GATCGCCGCCGGCGTCGCGCGAGCGCGCCCGGACGCGCTCGTGCGGCGGTGCCCGATGGCGGACGGCGGCGAAGGCACGC TCGACGCGCTGCTCGCGCACGGCGGCACCCGTCGCACGCTGCGCGTGCCGGGCGCGTCGCTCGCGCCGCGCGACGCGGCC GTCGGGCTCATCGACGCGCGCACGGCGGTCGTCGAAACCGCGGAAATCGTCGGCATCACCGATCCGGCCGGCATGAGCGC GCCCGTCGCCGCCCGCAGCACGCGCGGGCTCGGCAGCGCCATTCGCGCGCTCCTCGACGACGGCGTTCGCACGTTCTATG TCGCGCTCGGCGGCAGCAGCACGAACGACGCCGGCGCGGGCCTGCTGGCCGGCCTGGGCATGCGCGCGTTCGATGCGCAG GGCCGCGAGATCGAGCCGACGCCCGAGCGGCTCGCGCACGTCGCACGCGTGGACTTCGCCGGGCTCGACGCCCGCGTGGC CGGCGCGTCGTTCGTCGCGATGTCCGACGTCGACAATCCGCTCACGGGCGCGCACGGCGCGACCGCCGTGTTCGGCCCTC AAAAGGGCGTGGCGCCCGCGCAGGTCGCGCCGCTCGACGCCGCGCTCGACCACTTCGCGACGCTCGTCGAGGCCGCGCTC GCCCTACGCCCCACGGCGGCAGCGCACGCCCGCGCCCGCGATCTGCCCGGCGCCGGCGCGGCGGGCGGGCTCGGCTTCGC ACTGCATGTGCTCGGCGCGCGCTTCGAGCCGGGCGCCGAGGTCGTCGCGCGGCAGATCGGGCTCGACGCGGCGCTCGCGG GCGCGAACTGGCTGCTCACGGGCGAAGGCCGCTCGGATGCGCAGACGCTGCACGGCAAGGCGCCGTTCGTCGCGTGCCGG CATGCGCGCGCGGCCGGCGTGCCGGCGACGCTGCTGTCCGGCGCGATCGACCCGGCGGCGCTGCCGCAATTGTCCGAACA TTTCGACGGCTGTTTCTCGCCCGCACCGGGGCCGATCACGCTCGAGGCCGCGCTGCGCGACGCCGCGCGCCTGCTCGAGA ACGCGGCCGAGCAACTGGCGCGGCTGCGCTACGGCCGCCCGTGA
Upstream 100 bases:
>100_bases TCGCCCGCCCGCACGGCTCGGGCGAGCATTCGCCGTACCCGCGCCCCTCGGGCCGCGCGACGCCCGCGTCGAAGGAAACA GAACCGCATTCGGAGGCACC
Downstream 100 bases:
>100_bases CAGACCCGCCGCGCACGCGGCGAGCCCCCCGTGAATCGCACCGTTGACCGCGCGCCGCGATGCGGCAACAATCGGGCCCG CACCCCTCATTCAGGACACG
Product: glycerate kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 387; Mature: 386
Protein sequence:
>387_residues MPQPSPIVVIAPDSFKGSLSAEQVANAIAAGVARARPDALVRRCPMADGGEGTLDALLAHGGTRRTLRVPGASLAPRDAA VGLIDARTAVVETAEIVGITDPAGMSAPVAARSTRGLGSAIRALLDDGVRTFYVALGGSSTNDAGAGLLAGLGMRAFDAQ GREIEPTPERLAHVARVDFAGLDARVAGASFVAMSDVDNPLTGAHGATAVFGPQKGVAPAQVAPLDAALDHFATLVEAAL ALRPTAAAHARARDLPGAGAAGGLGFALHVLGARFEPGAEVVARQIGLDAALAGANWLLTGEGRSDAQTLHGKAPFVACR HARAAGVPATLLSGAIDPAALPQLSEHFDGCFSPAPGPITLEAALRDAARLLENAAEQLARLRYGRP
Sequences:
>Translated_387_residues MPQPSPIVVIAPDSFKGSLSAEQVANAIAAGVARARPDALVRRCPMADGGEGTLDALLAHGGTRRTLRVPGASLAPRDAA VGLIDARTAVVETAEIVGITDPAGMSAPVAARSTRGLGSAIRALLDDGVRTFYVALGGSSTNDAGAGLLAGLGMRAFDAQ GREIEPTPERLAHVARVDFAGLDARVAGASFVAMSDVDNPLTGAHGATAVFGPQKGVAPAQVAPLDAALDHFATLVEAAL ALRPTAAAHARARDLPGAGAAGGLGFALHVLGARFEPGAEVVARQIGLDAALAGANWLLTGEGRSDAQTLHGKAPFVACR HARAAGVPATLLSGAIDPAALPQLSEHFDGCFSPAPGPITLEAALRDAARLLENAAEQLARLRYGRP >Mature_386_residues PQPSPIVVIAPDSFKGSLSAEQVANAIAAGVARARPDALVRRCPMADGGEGTLDALLAHGGTRRTLRVPGASLAPRDAAV GLIDARTAVVETAEIVGITDPAGMSAPVAARSTRGLGSAIRALLDDGVRTFYVALGGSSTNDAGAGLLAGLGMRAFDAQG REIEPTPERLAHVARVDFAGLDARVAGASFVAMSDVDNPLTGAHGATAVFGPQKGVAPAQVAPLDAALDHFATLVEAALA LRPTAAAHARARDLPGAGAAGGLGFALHVLGARFEPGAEVVARQIGLDAALAGANWLLTGEGRSDAQTLHGKAPFVACRH ARAAGVPATLLSGAIDPAALPQLSEHFDGCFSPAPGPITLEAALRDAARLLENAAEQLARLRYGRP
Specific function: Glyoxylate catabolism. [C]
COG id: COG1929
COG function: function code G; Glycerate kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycerate kinase type-1 family [H]
Homologues:
Organism=Escherichia coli, GI1786724, Length=375, Percent_Identity=37.3333333333333, Blast_Score=186, Evalue=3e-48, Organism=Escherichia coli, GI145693185, Length=377, Percent_Identity=34.7480106100796, Blast_Score=185, Evalue=4e-48,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018193 - InterPro: IPR004381 [H]
Pfam domain/function: PF02595 Gly_kinase [H]
EC number: =2.7.1.31 [H]
Molecular weight: Translated: 39021; Mature: 38889
Theoretical pI: Translated: 6.61; Mature: 6.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPQPSPIVVIAPDSFKGSLSAEQVANAIAAGVARARPDALVRRCPMADGGEGTLDALLAH CCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCHHHHHHHHC GGTRRTLRVPGASLAPRDAAVGLIDARTAVVETAEIVGITDPAGMSAPVAARSTRGLGSA CCCCEEEECCCCCCCCCHHHEEEHHHHHHHHHHHHEEECCCCCCCCCCCHHHHHCCHHHH IRALLDDGVRTFYVALGGSSTNDAGAGLLAGLGMRAFDAQGREIEPTPERLAHVARVDFA HHHHHHCCCEEEEEEECCCCCCCCHHHHHHHCCCHHHCCCCCCCCCCHHHHHHHHHHHHC GLDARVAGASFVAMSDVDNPLTGAHGATAVFGPQKGVAPAQVAPLDAALDHFATLVEAAL CCCCCCCCCEEEEECCCCCCCCCCCCCEEEECCCCCCCCCHHCHHHHHHHHHHHHHHHHH ALRPTAAAHARARDLPGAGAAGGLGFALHVLGARFEPGAEVVARQIGLDAALAGANWLLT HHCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHCCHHHCCCCCEEEE GEGRSDAQTLHGKAPFVACRHARAAGVPATLLSGAIDPAALPQLSEHFDGCFSPAPGPIT CCCCCHHHHHCCCCCHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCEE LEAALRDAARLLENAAEQLARLRYGRP HHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure PQPSPIVVIAPDSFKGSLSAEQVANAIAAGVARARPDALVRRCPMADGGEGTLDALLAH CCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCHHHHHHHHC GGTRRTLRVPGASLAPRDAAVGLIDARTAVVETAEIVGITDPAGMSAPVAARSTRGLGSA CCCCEEEECCCCCCCCCHHHEEEHHHHHHHHHHHHEEECCCCCCCCCCCHHHHHCCHHHH IRALLDDGVRTFYVALGGSSTNDAGAGLLAGLGMRAFDAQGREIEPTPERLAHVARVDFA HHHHHHCCCEEEEEEECCCCCCCCHHHHHHHCCCHHHCCCCCCCCCCHHHHHHHHHHHHC GLDARVAGASFVAMSDVDNPLTGAHGATAVFGPQKGVAPAQVAPLDAALDHFATLVEAAL CCCCCCCCCEEEEECCCCCCCCCCCCCEEEECCCCCCCCCHHCHHHHHHHHHHHHHHHHH ALRPTAAAHARARDLPGAGAAGGLGFALHVLGARFEPGAEVVARQIGLDAALAGANWLLT HHCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHCCHHHCCCCCEEEE GEGRSDAQTLHGKAPFVACRHARAAGVPATLLSGAIDPAALPQLSEHFDGCFSPAPGPIT CCCCCHHHHHCCCCCHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCEE LEAALRDAARLLENAAEQLARLRYGRP HHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7584049; 9384377; 3020045 [H]