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The map label for this gene is 126453741

Identifier: 126453741

GI number: 126453741

Start: 3811917

End: 3812573

Strand: Direct

Name: 126453741

Synonym: BURPS1106A_3904

Alternate gene names: NA

Gene position: 3811917-3812573 (Clockwise)

Preceding gene: 126452838

Following gene: 126452937

Centisome position: 95.57

GC content: 67.43

Gene sequence:

>657_bases
ATGAGCGCCGCGCCGACGATGCCGAGCCGCGAAATCTACGTGAGCACCGACGTCGAGGCGGACGGCCCGATCCCGGGCCC
GCACTCGATGCTGAGCTTCGCGTCCGCCGCGTTCACCGAGGACAAGGAACTGATCGCGACGTTCTCCGCGAATCTCGAGC
TGCTGCCGGGCGCGGCGGCTCACCCGGTGCAGGCCGCATGGTGGAAGACGCAGCCCGAAGCGTGGGCCGCATGCCGGCGC
GATTTGCAGGCGCCCGAGGCCGCGCTCGCCGCGTACGTCGAATGGGTCGAGGCGCTGCCCGGCAAGCCCGTGTTCGTCGC
GATGCCGGCGGGCTTCGATTTCACGTTCATGTTCTGGTACATGATGCGCTTCACCGGGCGCTGCCCGTTTTCGTGGTCGG
CGCTCGACATCAAGACGCTCGCGTTCGCGATCACCGGCCTGCCGTACCGGAAGGCGATCAAGCCGCGCTTCCCGAAGCGC
TGGTTCGACGACTATCCGCACACGCACGTCGCGCTCGACGATGCGATCGAGCAAGGCGCGCTCTTTTGCAACATGCTCGC
CGACCTGCGCGCGCTGCAGACGGCGAAGGCGTCGGCGCCGCCCGTCGAAGAAGCGGATGAATCAGCACAAAATGCCGCCG
ACGGCCCGAGAAATTAG

Upstream 100 bases:

>100_bases
CGCTCGGCGACGACGTCACGTTCGTGCCCGGCCACGGCCCCGTGTCGACGTTCGGCGACGAGCGCCGCACGAATCCGTTC
GTCGCGGACGGGGTGGCGGG

Downstream 100 bases:

>100_bases
CGAATATCGCTCGTTTCAACGGCTCCAGATTGCCTTTCTTTTCACCCGCCTCTACCATTGCCAAATGTTGTAGCCGCTTT
GGAGGCGCAGGTGACCCTCG

Product: hypothetical protein

Products: NA

Alternate protein names: Exonuclease RNAse T And DNA Polymerase III

Number of amino acids: Translated: 218; Mature: 217

Protein sequence:

>218_residues
MSAAPTMPSREIYVSTDVEADGPIPGPHSMLSFASAAFTEDKELIATFSANLELLPGAAAHPVQAAWWKTQPEAWAACRR
DLQAPEAALAAYVEWVEALPGKPVFVAMPAGFDFTFMFWYMMRFTGRCPFSWSALDIKTLAFAITGLPYRKAIKPRFPKR
WFDDYPHTHVALDDAIEQGALFCNMLADLRALQTAKASAPPVEEADESAQNAADGPRN

Sequences:

>Translated_218_residues
MSAAPTMPSREIYVSTDVEADGPIPGPHSMLSFASAAFTEDKELIATFSANLELLPGAAAHPVQAAWWKTQPEAWAACRR
DLQAPEAALAAYVEWVEALPGKPVFVAMPAGFDFTFMFWYMMRFTGRCPFSWSALDIKTLAFAITGLPYRKAIKPRFPKR
WFDDYPHTHVALDDAIEQGALFCNMLADLRALQTAKASAPPVEEADESAQNAADGPRN
>Mature_217_residues
SAAPTMPSREIYVSTDVEADGPIPGPHSMLSFASAAFTEDKELIATFSANLELLPGAAAHPVQAAWWKTQPEAWAACRRD
LQAPEAALAAYVEWVEALPGKPVFVAMPAGFDFTFMFWYMMRFTGRCPFSWSALDIKTLAFAITGLPYRKAIKPRFPKRW
FDDYPHTHVALDDAIEQGALFCNMLADLRALQTAKASAPPVEEADESAQNAADGPRN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23956; Mature: 23825

Theoretical pI: Translated: 4.75; Mature: 4.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAAPTMPSREIYVSTDVEADGPIPGPHSMLSFASAAFTEDKELIATFSANLELLPGAAA
CCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHCCCCEECCCCCC
HPVQAAWWKTQPEAWAACRRDLQAPEAALAAYVEWVEALPGKPVFVAMPAGFDFTFMFWY
CCCHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHH
MMRFTGRCPFSWSALDIKTLAFAITGLPYRKAIKPRFPKRWFDDYPHTHVALDDAIEQGA
HHHHCCCCCCCCCHHHHHHHHHHHHCCCHHHHCCCCCCHHHHHCCCCCEEHHHHHHHHHH
LFCNMLADLRALQTAKASAPPVEEADESAQNAADGPRN
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
SAAPTMPSREIYVSTDVEADGPIPGPHSMLSFASAAFTEDKELIATFSANLELLPGAAA
CCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHCCCCEECCCCCC
HPVQAAWWKTQPEAWAACRRDLQAPEAALAAYVEWVEALPGKPVFVAMPAGFDFTFMFWY
CCCHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHH
MMRFTGRCPFSWSALDIKTLAFAITGLPYRKAIKPRFPKRWFDDYPHTHVALDDAIEQGA
HHHHCCCCCCCCCHHHHHHHHHHHHCCCHHHHCCCCCCHHHHHCCCCCEEHHHHHHHHHH
LFCNMLADLRALQTAKASAPPVEEADESAQNAADGPRN
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA