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The map label for this gene is ytfH [C]

Identifier: 126453722

GI number: 126453722

Start: 3272449

End: 3272913

Strand: Reverse

Name: ytfH [C]

Synonym: BURPS1106A_3351

Alternate gene names: 126453722

Gene position: 3272913-3272449 (Counterclockwise)

Preceding gene: 126454051

Following gene: 126452568

Centisome position: 82.06

GC content: 73.55

Gene sequence:

>465_bases
ATGGCCCGACGTAGAGACATGAGCGACGACGCCTGCCCCGTCGCGCGCGCGGTGGATGCGGTCGGCGATCGCTGGTCGCT
CCTCATCGTGCGCGACGCGTTCGACGGCGTGCGCCGCTTCTCCGAGTTCCAGCGCAATCTCGGCATCGCGCGCAACATGC
TCGCCGACCGGTTGAAGACGCTCGTCGAAGCGGGCGTGCTCGCCGCGGCACCCGCGTCCGACGGCTCCGCGCATCACGAG
TACGTGCTGACCGACAAGGGGCGTGCGCTCTTTCCGGTCGTCGTCGCGCTGCGGCAGTGGGGCGAGTCGCAACTGTTCGG
CGCGGGCGAGCCGCATTCGCGCCTCGTCGAGCGCCGCAGCGGCCTGCCCGTCGCGCCGATGAGCCCGCGCACGCAGAGCG
GCCGCGCGCTGCGGCCCGAGGACGCGGTCGTCGACAAGCGCGGCGCGGACGCCGGGGCGGCGTGA

Upstream 100 bases:

>100_bases
TGGCGCGGCACGCCGGCGGTTTTAGAATGCAACCCATCGTCCATAGTGCGCGCGAGCCGGCGCCGCGCGCCGAGACTCCT
CCGTTTTTTTTTCGAAGCCC

Downstream 100 bases:

>100_bases
ACCGATTCGGCGCGCCGGCGCTCGCGCGCGCCGCGCAGCGGGTGAAGCGGCGAGCCTGATGACCCCGGTGAAACGGATGA
GTCGACGGACCCGACGAGCC

Product: putative transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 154; Mature: 153

Protein sequence:

>154_residues
MARRRDMSDDACPVARAVDAVGDRWSLLIVRDAFDGVRRFSEFQRNLGIARNMLADRLKTLVEAGVLAAAPASDGSAHHE
YVLTDKGRALFPVVVALRQWGESQLFGAGEPHSRLVERRSGLPVAPMSPRTQSGRALRPEDAVVDKRGADAGAA

Sequences:

>Translated_154_residues
MARRRDMSDDACPVARAVDAVGDRWSLLIVRDAFDGVRRFSEFQRNLGIARNMLADRLKTLVEAGVLAAAPASDGSAHHE
YVLTDKGRALFPVVVALRQWGESQLFGAGEPHSRLVERRSGLPVAPMSPRTQSGRALRPEDAVVDKRGADAGAA
>Mature_153_residues
ARRRDMSDDACPVARAVDAVGDRWSLLIVRDAFDGVRRFSEFQRNLGIARNMLADRLKTLVEAGVLAAAPASDGSAHHEY
VLTDKGRALFPVVVALRQWGESQLFGAGEPHSRLVERRSGLPVAPMSPRTQSGRALRPEDAVVDKRGADAGAA

Specific function: Unknown

COG id: COG1733

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH hxlR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002577
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01638 DUF24 [H]

EC number: NA

Molecular weight: Translated: 16674; Mature: 16543

Theoretical pI: Translated: 10.09; Mature: 10.09

Prosite motif: PS51118 HTH_HXLR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARRRDMSDDACPVARAVDAVGDRWSLLIVRDAFDGVRRFSEFQRNLGIARNMLADRLKT
CCCCCCCCCCCHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVEAGVLAAAPASDGSAHHEYVLTDKGRALFPVVVALRQWGESQLFGAGEPHSRLVERRS
HHHHHHHHCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHC
GLPVAPMSPRTQSGRALRPEDAVVDKRGADAGAA
CCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCC
>Mature Secondary Structure 
ARRRDMSDDACPVARAVDAVGDRWSLLIVRDAFDGVRRFSEFQRNLGIARNMLADRLKT
CCCCCCCCCCHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVEAGVLAAAPASDGSAHHEYVLTDKGRALFPVVVALRQWGESQLFGAGEPHSRLVERRS
HHHHHHHHCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHC
GLPVAPMSPRTQSGRALRPEDAVVDKRGADAGAA
CCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]