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The map label for this gene is 126453711

Identifier: 126453711

GI number: 126453711

Start: 1578063

End: 1578344

Strand: Reverse

Name: 126453711

Synonym: BURPS1106A_1623

Alternate gene names: NA

Gene position: 1578344-1578063 (Counterclockwise)

Preceding gene: 126453165

Following gene: 126452441

Centisome position: 39.57

GC content: 65.25

Gene sequence:

>282_bases
ATGGAAACCTACCTCGACCTTCTGGCCGAACGAGAAGCCCTGATGATCAAGCTGGATGCGGCGCGCATGCAGGCGCGCAG
CGCCGCGCTATCCGAAGTGAAGCGAATCGTCGAGGAATTCGAACTCACGACGCAGGAAGTGTTCGGCCGCGCGGGCGTGC
TGCGCCGTCGCGGCAAGCTCAAGCCGAAGTATCGCGATCCGAAAACCGGCGCGACCTGGAACGGCCGCGGCCGCCCGCCT
TCGTGGATCGCCGGAAAGGATCGCGCCGCGTTCGTCGCTTGA

Upstream 100 bases:

>100_bases
CGGCGGTCGGCTTGCCGTCTTTCATCCAACACACAACTCTACATTTGCCGGCCGATACGGGACGCGATCGAATCCCGACA
GGCAAGGGAGCACTTTTTTG

Downstream 100 bases:

>100_bases
TGCCCGCGCGCCGTCATGCGGCGCCGGGCGGCAACGTTTGCCCACACCGCGCTTGCGCCGCGCCTGTTGTGCACCTATTG
CGCGCCTGTCCCGCGTGCGC

Product: H-NS histone family protein

Products: NA

Alternate protein names: Histone-Like Nucleoid-Structuring Protein H-NS; H-NS Histone Family Protein; Hns-Like Protein; H-NS Histone-Like Protein; Histone Family Protein Nucleoid-Structuring Protein H-Ns; H-NS-Like Protein; H-NS-Like Proteins; Histone-Like Nucleoid-Structuring Protein H-Ns; H-NS-Like Transcription Regulator

Number of amino acids: Translated: 93; Mature: 93

Protein sequence:

>93_residues
METYLDLLAEREALMIKLDAARMQARSAALSEVKRIVEEFELTTQEVFGRAGVLRRRGKLKPKYRDPKTGATWNGRGRPP
SWIAGKDRAAFVA

Sequences:

>Translated_93_residues
METYLDLLAEREALMIKLDAARMQARSAALSEVKRIVEEFELTTQEVFGRAGVLRRRGKLKPKYRDPKTGATWNGRGRPP
SWIAGKDRAAFVA
>Mature_93_residues
METYLDLLAEREALMIKLDAARMQARSAALSEVKRIVEEFELTTQEVFGRAGVLRRRGKLKPKYRDPKTGATWNGRGRPP
SWIAGKDRAAFVA

Specific function: Unknown

COG id: COG2916

COG function: function code R; DNA-binding protein H-NS

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10519; Mature: 10519

Theoretical pI: Translated: 10.92; Mature: 10.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METYLDLLAEREALMIKLDAARMQARSAALSEVKRIVEEFELTTQEVFGRAGVLRRRGKL
CCHHHHHHHCCCHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
KPKYRDPKTGATWNGRGRPPSWIAGKDRAAFVA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
METYLDLLAEREALMIKLDAARMQARSAALSEVKRIVEEFELTTQEVFGRAGVLRRRGKL
CCHHHHHHHCCCHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
KPKYRDPKTGATWNGRGRPPSWIAGKDRAAFVA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA