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The map label for this gene is tolR [H]

Identifier: 126453667

GI number: 126453667

Start: 3151005

End: 3151454

Strand: Direct

Name: tolR [H]

Synonym: BURPS1106A_3239

Alternate gene names: 126453667

Gene position: 3151005-3151454 (Clockwise)

Preceding gene: 126452711

Following gene: 126452064

Centisome position: 79.0

GC content: 65.78

Gene sequence:

>450_bases
ATGGCCGGCACCCCCATTCGTTCCAGCATGCGCGGCGGCCGCTCGCGCCGCTCGATGGCCGACATCAACGTCGTCCCCTA
CATCGACGTGATGCTCGTGCTGCTCGTCATCTTCATGGTGACGGCGCCCCTCGTCGCGCCGTCGATCGTCAATCTGCCGA
CCGTCGGCAACGCCGCGCCGCAAGAGCAGACGCCGCCCGTCGTCGTCAACATCCAGGCCGACGGCAAGATCAGCGTCCGC
TACAAGGGCGATTCGGGCGCGTCGCAGGAAGACACGATGACGAAGGCCGAGCTCGACGGCTTCATCGCCGCGCGCCAGGC
CGACCACCCGGATCAGCCCGTCGTGATCGCAGCCGACAAGACGGTTCAATATGACGCGGTGATGACCGTAATGTCCGATC
TGAAGGCGCGCGGCGTGAAGCGCGTCGGCCTGCTCGTCAAATCGCAATGA

Upstream 100 bases:

>100_bases
CGCTACGCACACGACATCGACCGTCTCGCGATCCGCTTCGAGACGTTCATCGAAGAGTTCTCGAACATCCTGCAGCGCCA
GGCGCAATAAGGAGCACGCG

Downstream 100 bases:

>100_bases
AGCCTCGCCAGTCGCGCACCGCCGCCTACCCGCCCCGGCCGCCGCGCGAGCGCGGCACAGGCCGGGCGTTCCTGCTCGCC
GCGCTGATGCACGTGCTGCT

Product: TolR protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 149; Mature: 148

Protein sequence:

>149_residues
MAGTPIRSSMRGGRSRRSMADINVVPYIDVMLVLLVIFMVTAPLVAPSIVNLPTVGNAAPQEQTPPVVVNIQADGKISVR
YKGDSGASQEDTMTKAELDGFIAARQADHPDQPVVIAADKTVQYDAVMTVMSDLKARGVKRVGLLVKSQ

Sequences:

>Translated_149_residues
MAGTPIRSSMRGGRSRRSMADINVVPYIDVMLVLLVIFMVTAPLVAPSIVNLPTVGNAAPQEQTPPVVVNIQADGKISVR
YKGDSGASQEDTMTKAELDGFIAARQADHPDQPVVIAADKTVQYDAVMTVMSDLKARGVKRVGLLVKSQ
>Mature_148_residues
AGTPIRSSMRGGRSRRSMADINVVPYIDVMLVLLVIFMVTAPLVAPSIVNLPTVGNAAPQEQTPPVVVNIQADGKISVRY
KGDSGASQEDTMTKAELDGFIAARQADHPDQPVVIAADKTVQYDAVMTVMSDLKARGVKRVGLLVKSQ

Specific function: Involved in the tonB-independent uptake of proteins [H]

COG id: COG0848

COG function: function code U; Biopolymer transport protein

Gene ontology:

Cell location: Cell inner membrane; Single-pass type II membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the exbD/tolR family [H]

Homologues:

Organism=Escherichia coli, GI1789380, Length=130, Percent_Identity=39.2307692307692, Blast_Score=74, Evalue=3e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014168
- InterPro:   IPR003400 [H]

Pfam domain/function: PF02472 ExbD [H]

EC number: NA

Molecular weight: Translated: 15904; Mature: 15773

Theoretical pI: Translated: 9.58; Mature: 9.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.4 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGTPIRSSMRGGRSRRSMADINVVPYIDVMLVLLVIFMVTAPLVAPSIVNLPTVGNAAP
CCCCCCCHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
QEQTPPVVVNIQADGKISVRYKGDSGASQEDTMTKAELDGFIAARQADHPDQPVVIAADK
CCCCCCEEEEEECCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEECC
TVQYDAVMTVMSDLKARGVKRVGLLVKSQ
CCHHHHHHHHHHHHHHCCHHEEEEEEECC
>Mature Secondary Structure 
AGTPIRSSMRGGRSRRSMADINVVPYIDVMLVLLVIFMVTAPLVAPSIVNLPTVGNAAP
CCCCCCHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
QEQTPPVVVNIQADGKISVRYKGDSGASQEDTMTKAELDGFIAARQADHPDQPVVIAADK
CCCCCCEEEEEECCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEECC
TVQYDAVMTVMSDLKARGVKRVGLLVKSQ
CCHHHHHHHHHHHHHHCCHHEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8955385; 10984043 [H]