| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is phnI [H]
Identifier: 126453653
GI number: 126453653
Start: 3266087
End: 3267295
Strand: Reverse
Name: phnI [H]
Synonym: BURPS1106A_3343
Alternate gene names: 126453653
Gene position: 3267295-3266087 (Counterclockwise)
Preceding gene: 126453058
Following gene: 126455305
Centisome position: 81.92
GC content: 71.3
Gene sequence:
>1209_bases ATGTACGTGGCAGTCAAGGGCGGCGAGCGGGCGATCGAGGCGTCGTGGCGTTTGCTCGACCAAGCGCGGCGCGGCGACCC CGCCGTGCCCGAGCTGAGCGTCGCGCAGATTCGCGAGCAGCAGCGCCTCGCGGTCGCGCGCGTGATGACGGAAGGCTCGC TGTACGACGAGGCGCTGGCGGCGCTCGCGATCAAGCAGGCGGCGGGCGATCTCGTCGAGGCGATCTTCCTGCTGCGCGCA TACCGGACGACGCTGCCGCGCTTCGGCTACACCGCGCCGATCGATACCGGCGCGATGCGGCTCGAGCGACGGATCTCGGC AACGTTCAAGGACATCCCGGGCGGCCAGTTGCTCGGCCCGACCTACGATTACACGCAGCGGCTGCTCGATTTCGCGCTGC TCGCCGAAGGCGACGCAGCGCGGCACGAGCCGCACGAGGCCGAATCGGCGCGCGCCGCGGCCGACGCAGGCTCGCCGCCG CCGCATGCGACGCATGCGCCGCCGCCCGCGGCTGCGCGCGTGATCGCGCTCCTGAACGACGAAGGCCTGATCGAAGAGGA GCGGCCGACGGCGGTCGGCGCCGAGCCGGGCGACCTGTCGCGCGAGCCGCTCGCGTTTCCGGCCGATCGCGCGACGCGCC TGCAGAATCTCGCACGCGGCGACGAAGGTTTTCTGCTCGCGATGGGCTACGCGACGCAGCGCGGCTACGGTCATTCGCAT CCGTTCGCGGGCGAGCTGCGCTTTGGCGCCGTCGCCGTCGAAATGGCGCTCGACGAGCTCGACGGCGAGACGATCGAGAT CGGCGAGCTCGACGTGACCGAGTGCCAGATGATCAACCATTTTTCCGGCGGCGACGGCGAGCCGCCTCGCTTCACGCAGG GCTACGGCCTCGCGTTCGGCCATTCGGAGCGCAAGGCGATCGCGATGGCGCTCGTCGATCGCGCGCTGCGCGCGTCCGAG CTCGGCGAAGCCGCGCACTCGCCGCCGCAGGATCAGGAGTTCGTGCTGTCGCACAGCGACAACGTCGAGGCGTCCGGCTT CGTCCAACACCTGAAGCTGCCGCACTACGTCGATTTCCAGTCCGAGCTCGAGCTCGTGCGCCGCCTGCGCGCCGGGCATG CGGCGCAGGCGGGAGCGGGCGCGAACGCGCACGAGAACGCGCCCGCCCGCGCCGAACGCGCCGACACGCACACCGAGGAG TCCCGATGA
Upstream 100 bases:
>100_bases CGCAATTCGCCCCGCGCTTTCCGTGCGGAATCGATTGCTACCTGGTGTGCGGCGACATGCTGATCGGCCTGCCGCGCACG ACGATCGTGGAGGCAGGCTG
Downstream 100 bases:
>100_bases ACGCGCCCGACCATTGCGCGGCCGCCGCGCCCGACACGCACGCCGCCGAAGGCTACAACTTCGCGTACCTCGACGAGCAG ACGAAGCGGATGACCCGCCG
Product: phosphonate metabolism protein PhnI
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 402; Mature: 402
Protein sequence:
>402_residues MYVAVKGGERAIEASWRLLDQARRGDPAVPELSVAQIREQQRLAVARVMTEGSLYDEALAALAIKQAAGDLVEAIFLLRA YRTTLPRFGYTAPIDTGAMRLERRISATFKDIPGGQLLGPTYDYTQRLLDFALLAEGDAARHEPHEAESARAAADAGSPP PHATHAPPPAAARVIALLNDEGLIEEERPTAVGAEPGDLSREPLAFPADRATRLQNLARGDEGFLLAMGYATQRGYGHSH PFAGELRFGAVAVEMALDELDGETIEIGELDVTECQMINHFSGGDGEPPRFTQGYGLAFGHSERKAIAMALVDRALRASE LGEAAHSPPQDQEFVLSHSDNVEASGFVQHLKLPHYVDFQSELELVRRLRAGHAAQAGAGANAHENAPARAERADTHTEE SR
Sequences:
>Translated_402_residues MYVAVKGGERAIEASWRLLDQARRGDPAVPELSVAQIREQQRLAVARVMTEGSLYDEALAALAIKQAAGDLVEAIFLLRA YRTTLPRFGYTAPIDTGAMRLERRISATFKDIPGGQLLGPTYDYTQRLLDFALLAEGDAARHEPHEAESARAAADAGSPP PHATHAPPPAAARVIALLNDEGLIEEERPTAVGAEPGDLSREPLAFPADRATRLQNLARGDEGFLLAMGYATQRGYGHSH PFAGELRFGAVAVEMALDELDGETIEIGELDVTECQMINHFSGGDGEPPRFTQGYGLAFGHSERKAIAMALVDRALRASE LGEAAHSPPQDQEFVLSHSDNVEASGFVQHLKLPHYVDFQSELELVRRLRAGHAAQAGAGANAHENAPARAERADTHTEE SR >Mature_402_residues MYVAVKGGERAIEASWRLLDQARRGDPAVPELSVAQIREQQRLAVARVMTEGSLYDEALAALAIKQAAGDLVEAIFLLRA YRTTLPRFGYTAPIDTGAMRLERRISATFKDIPGGQLLGPTYDYTQRLLDFALLAEGDAARHEPHEAESARAAADAGSPP PHATHAPPPAAARVIALLNDEGLIEEERPTAVGAEPGDLSREPLAFPADRATRLQNLARGDEGFLLAMGYATQRGYGHSH PFAGELRFGAVAVEMALDELDGETIEIGELDVTECQMINHFSGGDGEPPRFTQGYGLAFGHSERKAIAMALVDRALRASE LGEAAHSPPQDQEFVLSHSDNVEASGFVQHLKLPHYVDFQSELELVRRLRAGHAAQAGAGANAHENAPARAERADTHTEE SR
Specific function: Belongs to an operon involved in alkylphosphonate uptake and C-P lyase. Exact function not known [H]
COG id: COG3626
COG function: function code P; Uncharacterized enzyme of phosphonate metabolism
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phnI family [H]
Homologues:
Organism=Escherichia coli, GI1790537, Length=370, Percent_Identity=59.7297297297297, Blast_Score=421, Evalue=1e-119,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008773 [H]
Pfam domain/function: PF05861 PhnI [H]
EC number: NA
Molecular weight: Translated: 43399; Mature: 43399
Theoretical pI: Translated: 4.90; Mature: 4.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYVAVKGGERAIEASWRLLDQARRGDPAVPELSVAQIREQQRLAVARVMTEGSLYDEALA CEEEECCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHH ALAIKQAAGDLVEAIFLLRAYRTTLPRFGYTAPIDTGAMRLERRISATFKDIPGGQLLGP HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCC TYDYTQRLLDFALLAEGDAARHEPHEAESARAAADAGSPPPHATHAPPPAAARVIALLND CHHHHHHHHHHHHHCCCCHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHEEEEECC EGLIEEERPTAVGAEPGDLSREPLAFPADRATRLQNLARGDEGFLLAMGYATQRGYGHSH CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEECHHHCCCCCCC PFAGELRFGAVAVEMALDELDGETIEIGELDVTECQMINHFSGGDGEPPRFTQGYGLAFG CCCCCCHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHCCCCCCCCCCCCCCCCCEEEC HSERKAIAMALVDRALRASELGEAAHSPPQDQEFVLSHSDNVEASGFVQHLKLPHYVDFQ CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHCCCCCCCHH SELELVRRLRAGHAAQAGAGANAHENAPARAERADTHTEESR HHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCC >Mature Secondary Structure MYVAVKGGERAIEASWRLLDQARRGDPAVPELSVAQIREQQRLAVARVMTEGSLYDEALA CEEEECCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHH ALAIKQAAGDLVEAIFLLRAYRTTLPRFGYTAPIDTGAMRLERRISATFKDIPGGQLLGP HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCC TYDYTQRLLDFALLAEGDAARHEPHEAESARAAADAGSPPPHATHAPPPAAARVIALLND CHHHHHHHHHHHHHCCCCHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHEEEEECC EGLIEEERPTAVGAEPGDLSREPLAFPADRATRLQNLARGDEGFLLAMGYATQRGYGHSH CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEECHHHCCCCCCC PFAGELRFGAVAVEMALDELDGETIEIGELDVTECQMINHFSGGDGEPPRFTQGYGLAFG CCCCCCHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHCCCCCCCCCCCCCCCCCEEEC HSERKAIAMALVDRALRASELGEAAHSPPQDQEFVLSHSDNVEASGFVQHLKLPHYVDFQ CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHCCCCCCCHH SELELVRRLRAGHAAQAGAGANAHENAPARAERADTHTEESR HHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2155230; 1840580; 7610040; 9278503 [H]