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The map label for this gene is spsC [H]

Identifier: 126453649

GI number: 126453649

Start: 3861823

End: 3862971

Strand: Direct

Name: spsC [H]

Synonym: BURPS1106A_3956

Alternate gene names: 126453649

Gene position: 3861823-3862971 (Clockwise)

Preceding gene: 126452788

Following gene: 126454553

Centisome position: 96.83

GC content: 64.49

Gene sequence:

>1149_bases
ATGAGCGCACTGCCGCTGCGCGCCGTCGAACCGTGGATCGACGAGCGCATCTTTGTCACCCAACCGCATCTCGCGCCGCT
CGCCGAATTCCTGCCTTATCTCGAGGCGATCTGGGAAAGCAAGGTGCTGACGAACGGCGGGCCGTTTCATCAGCAGCTCG
AGAAGGCGCTGTGCGACTACCTCGGCGTGCGTCACCTCGCGCTCTTCACGAACGGCACGCTCGCGCTCGTCACGGCGCTT
CAGGCGCTGCGCATCACGGGCGAAGTGATCACGACGCCGTATTCGTTCGTCGCGACCGCGCACTCGCTGCTGTGGAACGG
GATCAAGCCGGTGTTCGTCGACATCGATCCGAGCACGCTGAATCTCGATCCCGCGAAGATCGAGGCGGCGATCACGCCGC
AGACGACCGCGATCATGCCCGTGCACTGCTATGGCCGGCCGTGCGACGTCGCCGCGATCCAGAAAATCGCCGACAACTAC
AATCTGAAGGTGATCTATGACGCCGCGCATGCATTCGGCGTGAAGACGCCCGACGGCAGCGTGCTCGAGCACGGCGACAT
GTCGATCCTGAGCTTTCACGCGACGAAGGTATTCAACACGTTCGAAGGCGGCGCGATCGTCTGCCCGGACGCGAAGACGA
AGCAGCACATCGATCACCTGAAGAACTTCGGCTTCGTCGACGAAGTCACCGTCGTCGCGGCGGGAATCAACGGCAAGATG
AGCGAGATCAACGCGGCATTCGGTCTGCTGCAGCTCAAGCACATCGACGATGCGCTCGCGCGCCGCGCGAAGATCGACGC
CGCATACCGCGACGCGCTCGCCCGCGTGCCCGGCATCCGTTGCCTGCCGCCCGTCGACGCGCCGGTCGCGAATCATTCGT
ACTTCCCGATTCTCGTCGGCGACGACTACCCGATGAGCCGCGACGCGCTGTACCAGCGCCTGCGCGACCATCAGATCTAC
GCACGCCGCTATTTCTACCCGCTCATCTCCGATTTCCCGATGTATCGCGGGCTGCCGTCCGCGCAGCGCGGCAATCTGCC
CGTCGCCGCCGACGCCGCCGCGCGCGTGCTGTGCCTGCCGATCTATCCGGCGCTGTCCGATGCATCGCTCGAGCGAATCG
TATCGCTGATGGCGGGAGCGCATGCATGA

Upstream 100 bases:

>100_bases
CCTTTCGCATCATGTGGCGCCGCTGGTGCGACGGCCAGCCGCCCGCCCCGTTCGCGGTGCCGCCGCGCGACGCAACGACA
ACCGTCGCAGGAGACCGCTC

Downstream 100 bases:

>100_bases
CACCGGCCGCCCATCCGCCGCGCGCGGCGATCGCGGACATCGCCGGGCATCTGCCCGAGCAGGTGCTGACGAACGACGTC
CTCGCGCAGCTCTATCCGGA

Product: aminotransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 382; Mature: 381

Protein sequence:

>382_residues
MSALPLRAVEPWIDERIFVTQPHLAPLAEFLPYLEAIWESKVLTNGGPFHQQLEKALCDYLGVRHLALFTNGTLALVTAL
QALRITGEVITTPYSFVATAHSLLWNGIKPVFVDIDPSTLNLDPAKIEAAITPQTTAIMPVHCYGRPCDVAAIQKIADNY
NLKVIYDAAHAFGVKTPDGSVLEHGDMSILSFHATKVFNTFEGGAIVCPDAKTKQHIDHLKNFGFVDEVTVVAAGINGKM
SEINAAFGLLQLKHIDDALARRAKIDAAYRDALARVPGIRCLPPVDAPVANHSYFPILVGDDYPMSRDALYQRLRDHQIY
ARRYFYPLISDFPMYRGLPSAQRGNLPVAADAAARVLCLPIYPALSDASLERIVSLMAGAHA

Sequences:

>Translated_382_residues
MSALPLRAVEPWIDERIFVTQPHLAPLAEFLPYLEAIWESKVLTNGGPFHQQLEKALCDYLGVRHLALFTNGTLALVTAL
QALRITGEVITTPYSFVATAHSLLWNGIKPVFVDIDPSTLNLDPAKIEAAITPQTTAIMPVHCYGRPCDVAAIQKIADNY
NLKVIYDAAHAFGVKTPDGSVLEHGDMSILSFHATKVFNTFEGGAIVCPDAKTKQHIDHLKNFGFVDEVTVVAAGINGKM
SEINAAFGLLQLKHIDDALARRAKIDAAYRDALARVPGIRCLPPVDAPVANHSYFPILVGDDYPMSRDALYQRLRDHQIY
ARRYFYPLISDFPMYRGLPSAQRGNLPVAADAAARVLCLPIYPALSDASLERIVSLMAGAHA
>Mature_381_residues
SALPLRAVEPWIDERIFVTQPHLAPLAEFLPYLEAIWESKVLTNGGPFHQQLEKALCDYLGVRHLALFTNGTLALVTALQ
ALRITGEVITTPYSFVATAHSLLWNGIKPVFVDIDPSTLNLDPAKIEAAITPQTTAIMPVHCYGRPCDVAAIQKIADNYN
LKVIYDAAHAFGVKTPDGSVLEHGDMSILSFHATKVFNTFEGGAIVCPDAKTKQHIDHLKNFGFVDEVTVVAAGINGKMS
EINAAFGLLQLKHIDDALARRAKIDAAYRDALARVPGIRCLPPVDAPVANHSYFPILVGDDYPMSRDALYQRLRDHQIYA
RRYFYPLISDFPMYRGLPSAQRGNLPVAADAAARVLCLPIYPALSDASLERIVSLMAGAHA

Specific function: Unknown

COG id: COG0399

COG function: function code M; Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the degT/dnrJ/eryC1 family [H]

Homologues:

Organism=Escherichia coli, GI145693159, Length=382, Percent_Identity=30.6282722513089, Blast_Score=145, Evalue=4e-36,
Organism=Escherichia coli, GI2367285, Length=368, Percent_Identity=30.1630434782609, Blast_Score=117, Evalue=1e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000653
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF01041 DegT_DnrJ_EryC1 [H]

EC number: NA

Molecular weight: Translated: 41850; Mature: 41719

Theoretical pI: Translated: 6.75; Mature: 6.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSALPLRAVEPWIDERIFVTQPHLAPLAEFLPYLEAIWESKVLTNGGPFHQQLEKALCDY
CCCCCCCHHCHHHCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
LGVRHLALFTNGTLALVTALQALRITGEVITTPYSFVATAHSLLWNGIKPVFVDIDPSTL
HHHHHEEEHCCCHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHCCCCEEEEEECCCEE
NLDPAKIEAAITPQTTAIMPVHCYGRPCDVAAIQKIADNYNLKVIYDAAHAFGVKTPDGS
CCCHHHEEEEECCCCEEEEEEEECCCCCCHHHHHHHHCCCCEEEEEECHHHCCCCCCCCC
VLEHGDMSILSFHATKVFNTFEGGAIVCPDAKTKQHIDHLKNFGFVDEVTVVAAGINGKM
EEECCCCEEEEHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHCCCHHEEEEEEECCCCCH
SEINAAFGLLQLKHIDDALARRAKIDAAYRDALARVPGIRCLPPVDAPVANHSYFPILVG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEC
DDYPMSRDALYQRLRDHQIYARRYFYPLISDFPMYRGLPSAQRGNLPVAADAAARVLCLP
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCEECCCCCEEEEEE
IYPALSDASLERIVSLMAGAHA
CCCCCCHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SALPLRAVEPWIDERIFVTQPHLAPLAEFLPYLEAIWESKVLTNGGPFHQQLEKALCDY
CCCCCCHHCHHHCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
LGVRHLALFTNGTLALVTALQALRITGEVITTPYSFVATAHSLLWNGIKPVFVDIDPSTL
HHHHHEEEHCCCHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHCCCCEEEEEECCCEE
NLDPAKIEAAITPQTTAIMPVHCYGRPCDVAAIQKIADNYNLKVIYDAAHAFGVKTPDGS
CCCHHHEEEEECCCCEEEEEEEECCCCCCHHHHHHHHCCCCEEEEEECHHHCCCCCCCCC
VLEHGDMSILSFHATKVFNTFEGGAIVCPDAKTKQHIDHLKNFGFVDEVTVVAAGINGKM
EEECCCCEEEEHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHCCCHHEEEEEEECCCCCH
SEINAAFGLLQLKHIDDALARRAKIDAAYRDALARVPGIRCLPPVDAPVANHSYFPILVG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEC
DDYPMSRDALYQRLRDHQIYARRYFYPLISDFPMYRGLPSAQRGNLPVAADAAARVLCLP
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCEECCCCCEEEEEE
IYPALSDASLERIVSLMAGAHA
CCCCCCHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7934828; 9384377 [H]