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The map label for this gene is hspC2 [H]

Identifier: 126453648

GI number: 126453648

Start: 1429810

End: 1430247

Strand: Reverse

Name: hspC2 [H]

Synonym: BURPS1106A_1472

Alternate gene names: 126453648

Gene position: 1430247-1429810 (Counterclockwise)

Preceding gene: 126453289

Following gene: 126455287

Centisome position: 35.86

GC content: 65.3

Gene sequence:

>438_bases
ATGAGCGATCTCTATTTCGGCGCCGATCTCTTCAGCGAATTCGATCGTCTGCATCGGCAGATGGCGAACCTGTTCGGCGG
CTTCCCTTCCAGCATTCGCGCGAGCCGGCTCGGCGGCTTCCCGGCATTGAACGTGGGCACGACCGAGGATTCGATCGAGA
TCGTCGTGTTCGCGCCCGGCATGCGCGCGGCCGACTTCGACGTGTCGATCGACAAGGGGCTGCTCGCGATCAGCGGCGAA
CGCAAGGCCGCGCAACGCGCGGAGGGCGAGGTGCGCGCCTATGCGCAGGAGCGCTTCAGCGGTGCATTCCGGCGCGTCGT
CGAATTGCCGCAGAACGCCGATCCCGACAAGATCCGCGCACGCTACGAGAACGGTTGCCTGCTGATCAGCGTCGGCAAGC
GCGAAGCGTCGAAGCCGCGCGCGATCACCGTGCAATGA

Upstream 100 bases:

>100_bases
TGCGCGTTTCGACCGATTTGTCGCGGCCAGGCAAACGAACCGGTACGTCCGCAGACGCCGCCGGCGCGTTCGCCAGGCTT
CGTTCCAGGAGGACACGACC

Downstream 100 bases:

>100_bases
GCCCCGTCAGTCTCGAATCAAGGAGCCAATCGTGAACACCCGCAATCCAGCCGCAGAACGTCCATCCGCCGTACCCGCTC
GCCGCGACGCGGGCGATGCG

Product: HSP20 family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 145; Mature: 144

Protein sequence:

>145_residues
MSDLYFGADLFSEFDRLHRQMANLFGGFPSSIRASRLGGFPALNVGTTEDSIEIVVFAPGMRAADFDVSIDKGLLAISGE
RKAAQRAEGEVRAYAQERFSGAFRRVVELPQNADPDKIRARYENGCLLISVGKREASKPRAITVQ

Sequences:

>Translated_145_residues
MSDLYFGADLFSEFDRLHRQMANLFGGFPSSIRASRLGGFPALNVGTTEDSIEIVVFAPGMRAADFDVSIDKGLLAISGE
RKAAQRAEGEVRAYAQERFSGAFRRVVELPQNADPDKIRARYENGCLLISVGKREASKPRAITVQ
>Mature_144_residues
SDLYFGADLFSEFDRLHRQMANLFGGFPSSIRASRLGGFPALNVGTTEDSIEIVVFAPGMRAADFDVSIDKGLLAISGER
KAAQRAEGEVRAYAQERFSGAFRRVVELPQNADPDKIRARYENGCLLISVGKREASKPRAITVQ

Specific function: Unknown

COG id: COG0071

COG function: function code O; Molecular chaperone (small heat shock protein)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the small heat shock protein (HSP20) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002068
- InterPro:   IPR008978 [H]

Pfam domain/function: PF00011 HSP20 [H]

EC number: NA

Molecular weight: Translated: 15928; Mature: 15797

Theoretical pI: Translated: 8.48; Mature: 8.48

Prosite motif: PS01031 HSP20

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDLYFGADLFSEFDRLHRQMANLFGGFPSSIRASRLGGFPALNVGTTEDSIEIVVFAPG
CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCEECCCCCCCCEEEEEECCC
MRAADFDVSIDKGLLAISGERKAAQRAEGEVRAYAQERFSGAFRRVVELPQNADPDKIRA
CCCCCCCCCCCCCEEEECCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
RYENGCLLISVGKREASKPRAITVQ
HHCCCEEEEEECCCCCCCCCEEEEC
>Mature Secondary Structure 
SDLYFGADLFSEFDRLHRQMANLFGGFPSSIRASRLGGFPALNVGTTEDSIEIVVFAPG
CCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCEECCCCCCCCEEEEEECCC
MRAADFDVSIDKGLLAISGERKAAQRAEGEVRAYAQERFSGAFRRVVELPQNADPDKIRA
CCCCCCCCCCCCCEEEECCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
RYENGCLLISVGKREASKPRAITVQ
HHCCCEEEEEECCCCCCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA