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The map label for this gene is yccU [H]

Identifier: 126453580

GI number: 126453580

Start: 3944924

End: 3945265

Strand: Reverse

Name: yccU [H]

Synonym: BURPS1106A_4038

Alternate gene names: 126453580

Gene position: 3945265-3944924 (Counterclockwise)

Preceding gene: 126452177

Following gene: 126451836

Centisome position: 98.92

GC content: 68.42

Gene sequence:

>342_bases
ATGAAGTCGCTGCTTACCTGCGACAAAATGGTTAATCGGATCGTACCCGTCAATCCGCTGCTGGCCGGCGCGGCGTTGCT
CGGCGAACGCGTGCATCCGTCGCTTGCCGATGCGCGCGCGGCGCTCGCGGCCGACGGCATCGAAATCGACATGGTCGACG
TGTTTCGCAAGCCGGAAGAGGTGCCGGCCGTGGTCGACGCGGCGCTCGCCATCGGCGCGCGGTCGCTCTGGTTGCAGCCC
GGCGTCGTGCACGACGAGGCGGCTGCGAAGGCGCGGACGGCGGGGCTCGATGTCGTCGTCGACCGCTGCGTGAAGATCGA
GCACCGGGGGCGCTTCGGTTAG

Upstream 100 bases:

>100_bases
ATGACAGCGATATCGACTGACGAAGTTCCGAGAAAGATTTTGAAACGCGATCGGGTAATCGCGGTAGTCGGCCTTTCGGA
TAAACCTTATCGGCCCAGTT

Downstream 100 bases:

>100_bases
CCCAGGCGCGTCGGCCGACAGTGCGCGCGTCGCCGGCGGGCGTCATTTCCGCCGCGGCACGCCCGGCTGGGTCCGACCTA
CGCGGACAGGCTCGGATATA

Product: CoA-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 113; Mature: 113

Protein sequence:

>113_residues
MKSLLTCDKMVNRIVPVNPLLAGAALLGERVHPSLADARAALAADGIEIDMVDVFRKPEEVPAVVDAALAIGARSLWLQP
GVVHDEAAAKARTAGLDVVVDRCVKIEHRGRFG

Sequences:

>Translated_113_residues
MKSLLTCDKMVNRIVPVNPLLAGAALLGERVHPSLADARAALAADGIEIDMVDVFRKPEEVPAVVDAALAIGARSLWLQP
GVVHDEAAAKARTAGLDVVVDRCVKIEHRGRFG
>Mature_113_residues
MKSLLTCDKMVNRIVPVNPLLAGAALLGERVHPSLADARAALAADGIEIDMVDVFRKPEEVPAVVDAALAIGARSLWLQP
GVVHDEAAAKARTAGLDVVVDRCVKIEHRGRFG

Specific function: Unknown

COG id: COG1832

COG function: function code R; Predicted CoA-binding protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081810, Length=94, Percent_Identity=46.8085106382979, Blast_Score=86, Evalue=6e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003781
- InterPro:   IPR016040 [H]

Pfam domain/function: PF02629 CoA_binding [H]

EC number: NA

Molecular weight: Translated: 11987; Mature: 11987

Theoretical pI: Translated: 6.78; Mature: 6.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSLLTCDKMVNRIVPVNPLLAGAALLGERVHPSLADARAALAADGIEIDMVDVFRKPEE
CCCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCEEHHHHHHCCCCC
VPAVVDAALAIGARSLWLQPGVVHDEAAAKARTAGLDVVVDRCVKIEHRGRFG
CHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MKSLLTCDKMVNRIVPVNPLLAGAALLGERVHPSLADARAALAADGIEIDMVDVFRKPEE
CCCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCEEHHHHHHCCCCC
VPAVVDAALAIGARSLWLQPGVVHDEAAAKARTAGLDVVVDRCVKIEHRGRFG
CHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503; 9868784 [H]