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The map label for this gene is 126453574

Identifier: 126453574

GI number: 126453574

Start: 477129

End: 477842

Strand: Direct

Name: 126453574

Synonym: BURPS1106A_0514

Alternate gene names: NA

Gene position: 477129-477842 (Clockwise)

Preceding gene: 126454591

Following gene: 126451906

Centisome position: 11.96

GC content: 68.63

Gene sequence:

>714_bases
ATGAGGATTCGCTGGCTGCCCGCGCTGCTGATTCTCGCGGTGATCGCGATCACGGTGCGGCTTGGTTTCTGGCAGCGCGA
GCGTGCACACCAGAAGGAGGCGCTCGATGCGCAGATCACGCGCTACGAGCACGCGAATCCCGTCGACGTGCCGCGCGAGC
GCATCGCATTGAAGGACATCGAGTTCCATCGCGTGCGCGCCACCGGGCGCTTCATGCCGGAGCACGCGGTGTTCCTCGAC
AACCGGCCGTACAACGATCAGCCGGGCTTCTACGTCGTGATGCCGATGAAGCTCGCGAACGGCGGCTACGTGCTCGTGAA
CCGCGGCTGGCTGCCGCGCAATTACGCCGACCGCACCGCGATCGAGCCGTTCGTGACGCCGGCGGGCGACGTGACGATCG
AGGGCATCGCGCGCGGCAACGCGTCGCGCGCGTTCGAACTCGGCGAGGGCGGCTCGGCCGCGCGCCAGAAGATCCGGCAG
AATCTCGACGCCGCCGAGTATGCGCAGGAAACGGGCCTGCCGCTGCAGCCGTTCGTGATTCAGCAGACGAGCGACGACGG
CGACAAGCTCGTGCGCGACTGGCCCGCGCCGACCACGGGCGTCGAGCGCAACTACGGTTACATGTTCCAGTGGTGGGGCA
TGGCGGCGGCCGCCGCCGGCTTCGGTCTGTACGCCGCGCGGCGGGCGGCGAGAAAGCAGTCCGGCGACGCATGA

Upstream 100 bases:

>100_bases
CGAGAATGTGCATGAAGCTAACCGGAAACCGGCAGTTGGAGGAAGAAAGGGTCATTATCGCACTTCGATCGGGCGATCGT
CGCGCCCGGGGAGCGGCGCG

Downstream 100 bases:

>100_bases
CGGCGGCGCCGGCGAATCGCGCGGCGCCGCGCGACGTCCATCGTTTCAAGAGGTCTCCTTGGTGATGCAAACTTCCCGTC
CGACGCGGCCGCAAGACGGC

Product: surf1 family protein

Products: NA

Alternate protein names: Transmembrane Cytochrome Oxidase; Surfeit Locus 1 Family Protein; Transmembrane Cytochrome Oxidase Complex Biogenesis Factor; SURF1-Like Protein; Transmembrane Cytochrome Oxidase Complex Protein; Cytochrome C Oxidase Assembly; Surfeit Locus 1-Like Protein; Cytochrome Oxidase Complex Biogenesis Factor; Cytochrome Oxidase Assembly Protein SurF1

Number of amino acids: Translated: 237; Mature: 237

Protein sequence:

>237_residues
MRIRWLPALLILAVIAITVRLGFWQRERAHQKEALDAQITRYEHANPVDVPRERIALKDIEFHRVRATGRFMPEHAVFLD
NRPYNDQPGFYVVMPMKLANGGYVLVNRGWLPRNYADRTAIEPFVTPAGDVTIEGIARGNASRAFELGEGGSAARQKIRQ
NLDAAEYAQETGLPLQPFVIQQTSDDGDKLVRDWPAPTTGVERNYGYMFQWWGMAAAAAGFGLYAARRAARKQSGDA

Sequences:

>Translated_237_residues
MRIRWLPALLILAVIAITVRLGFWQRERAHQKEALDAQITRYEHANPVDVPRERIALKDIEFHRVRATGRFMPEHAVFLD
NRPYNDQPGFYVVMPMKLANGGYVLVNRGWLPRNYADRTAIEPFVTPAGDVTIEGIARGNASRAFELGEGGSAARQKIRQ
NLDAAEYAQETGLPLQPFVIQQTSDDGDKLVRDWPAPTTGVERNYGYMFQWWGMAAAAAGFGLYAARRAARKQSGDA
>Mature_237_residues
MRIRWLPALLILAVIAITVRLGFWQRERAHQKEALDAQITRYEHANPVDVPRERIALKDIEFHRVRATGRFMPEHAVFLD
NRPYNDQPGFYVVMPMKLANGGYVLVNRGWLPRNYADRTAIEPFVTPAGDVTIEGIARGNASRAFELGEGGSAARQKIRQ
NLDAAEYAQETGLPLQPFVIQQTSDDGDKLVRDWPAPTTGVERNYGYMFQWWGMAAAAAGFGLYAARRAARKQSGDA

Specific function: Unknown

COG id: COG3346

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26643; Mature: 26643

Theoretical pI: Translated: 9.71; Mature: 9.71

Prosite motif: PS50895 SURF1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIRWLPALLILAVIAITVRLGFWQRERAHQKEALDAQITRYEHANPVDVPRERIALKDI
CCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCC
EFHRVRATGRFMPEHAVFLDNRPYNDQPGFYVVMPMKLANGGYVLVNRGWLPRNYADRTA
CEEEEEECCCCCCCCEEEECCCCCCCCCCEEEEEEEEECCCCEEEEECCCCCCCCCCCCC
IEPFVTPAGDVTIEGIARGNASRAFELGEGGSAARQKIRQNLDAAEYAQETGLPLQPFVI
CCCCCCCCCCEEEEEEECCCCCCEEECCCCCHHHHHHHHHCCCHHHHHHHCCCCCCCEEE
QQTSDDGDKLVRDWPAPTTGVERNYGYMFQWWGMAAAAAGFGLYAARRAARKQSGDA
EECCCCHHHHHHHCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MRIRWLPALLILAVIAITVRLGFWQRERAHQKEALDAQITRYEHANPVDVPRERIALKDI
CCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCC
EFHRVRATGRFMPEHAVFLDNRPYNDQPGFYVVMPMKLANGGYVLVNRGWLPRNYADRTA
CEEEEEECCCCCCCCEEEECCCCCCCCCCEEEEEEEEECCCCEEEEECCCCCCCCCCCCC
IEPFVTPAGDVTIEGIARGNASRAFELGEGGSAARQKIRQNLDAAEYAQETGLPLQPFVI
CCCCCCCCCCEEEEEEECCCCCCEEECCCCCHHHHHHHHHCCCHHHHHHHCCCCCCCEEE
QQTSDDGDKLVRDWPAPTTGVERNYGYMFQWWGMAAAAAGFGLYAARRAARKQSGDA
EECCCCHHHHHHHCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA