Click here to switch to the map view.

The map label for this gene is 126453558

Identifier: 126453558

GI number: 126453558

Start: 1792012

End: 1792581

Strand: Direct

Name: 126453558

Synonym: BURPS1106A_1831

Alternate gene names: NA

Gene position: 1792012-1792581 (Clockwise)

Preceding gene: 126454583

Following gene: 126453393

Centisome position: 44.93

GC content: 69.3

Gene sequence:

>570_bases
GTGCGTGCGCCGCTTCGCGGCGGCGCACGGTTCGCCCTCCCGTATTTTCGCTTTCGTTCGCCTATACGCTTCATGGATAT
CGCTCTCGATTTACAGTCGATCGCCGTACAGGAAAAAACCCTCGTGTTCCCGCAGTTCGACGCCGCGCGCGCATGGGCGC
TCGGCTCGCAACTGCGCGAATTCGCGCTCGCGCGCGGCCACGCGGTCGCGATCGACGTGCGCACGTTCGGTCAGCCGCTC
TTCTTCGCGCTCGTCGACGGCGCGACGCCCGACAACGTCGACTGGGCGCGCCGCAAGGGCAACGTCGTCGCGCACTTCAG
GCGCAGCTCGTATGCGATCGGGCTGCGCCTGCAGCAGGCGGGCGCGACGCTCGCCGACAAGCATGGGCTGCCCGCTGCCG
AGTACGCGTCGCACGGCGGCGCGTTTCCGATCGCGGTCGCGGGCGCCGGCGTGATCGGCTCGGTCACGGTGTCGGGGCTG
CCGCAGCGCGGCGATCACGAGCTCGTCGTCGAAGCGCTGTGCGCGCAATTGGGCCACGCTTACGCGACGCTCGCGCTCAC
GGGGAACTGA

Upstream 100 bases:

>100_bases
TCGCAAGCCGTGCTGCGCTAGAATCGGAACGCATCAGCGAACCGCTTCTTCGAGCCGCTTCTTCGAGTCGTTTCGCCGGC
CGAGCCGCCGAGGCTAGGTA

Downstream 100 bases:

>100_bases
CGCGATGCAACTTCCAGGTTACGCATGGCTCGCGATCGCGATCGTCGCCGAGGTGGTCGGCACGTCGGCGCTGCGCGCAG
CCGAAGGTTTCACGCGGCTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 189; Mature: 189

Protein sequence:

>189_residues
MRAPLRGGARFALPYFRFRSPIRFMDIALDLQSIAVQEKTLVFPQFDAARAWALGSQLREFALARGHAVAIDVRTFGQPL
FFALVDGATPDNVDWARRKGNVVAHFRRSSYAIGLRLQQAGATLADKHGLPAAEYASHGGAFPIAVAGAGVIGSVTVSGL
PQRGDHELVVEALCAQLGHAYATLALTGN

Sequences:

>Translated_189_residues
MRAPLRGGARFALPYFRFRSPIRFMDIALDLQSIAVQEKTLVFPQFDAARAWALGSQLREFALARGHAVAIDVRTFGQPL
FFALVDGATPDNVDWARRKGNVVAHFRRSSYAIGLRLQQAGATLADKHGLPAAEYASHGGAFPIAVAGAGVIGSVTVSGL
PQRGDHELVVEALCAQLGHAYATLALTGN
>Mature_189_residues
MRAPLRGGARFALPYFRFRSPIRFMDIALDLQSIAVQEKTLVFPQFDAARAWALGSQLREFALARGHAVAIDVRTFGQPL
FFALVDGATPDNVDWARRKGNVVAHFRRSSYAIGLRLQQAGATLADKHGLPAAEYASHGGAFPIAVAGAGVIGSVTVSGL
PQRGDHELVVEALCAQLGHAYATLALTGN

Specific function: Unknown

COG id: COG4702

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0303 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005624
- InterPro:   IPR010371 [H]

Pfam domain/function: PF03928 DUF336 [H]

EC number: NA

Molecular weight: Translated: 20209; Mature: 20209

Theoretical pI: Translated: 10.24; Mature: 10.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRAPLRGGARFALPYFRFRSPIRFMDIALDLQSIAVQEKTLVFPQFDAARAWALGSQLRE
CCCCCCCCCEEECHHHHHCCCHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHH
FALARGHAVAIDVRTFGQPLFFALVDGATPDNVDWARRKGNVVAHFRRSSYAIGLRLQQA
HHHHCCCEEEEEHHHCCCCEEEEEECCCCCCCCHHHHHCCCEEEEEECCCEEEEEEEECC
GATLADKHGLPAAEYASHGGAFPIAVAGAGVIGSVTVSGLPQRGDHELVVEALCAQLGHA
CCCHHHCCCCCHHHHHHCCCCCEEEEECCCEEEEEEECCCCCCCCHHHHHHHHHHHHCCE
YATLALTGN
EEEEEEECC
>Mature Secondary Structure
MRAPLRGGARFALPYFRFRSPIRFMDIALDLQSIAVQEKTLVFPQFDAARAWALGSQLRE
CCCCCCCCCEEECHHHHHCCCHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHH
FALARGHAVAIDVRTFGQPLFFALVDGATPDNVDWARRKGNVVAHFRRSSYAIGLRLQQA
HHHHCCCEEEEEHHHCCCCEEEEEECCCCCCCCHHHHHCCCEEEEEECCCEEEEEEEECC
GATLADKHGLPAAEYASHGGAFPIAVAGAGVIGSVTVSGLPQRGDHELVVEALCAQLGHA
CCCHHHCCCCCHHHHHHCCCCCEEEEECCCEEEEEEECCCCCCCCHHHHHHHHHHHHCCE
YATLALTGN
EEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA