| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is paaA [H]
Identifier: 126453514
GI number: 126453514
Start: 3737470
End: 3738468
Strand: Direct
Name: paaA [H]
Synonym: BURPS1106A_3836
Alternate gene names: 126453514
Gene position: 3737470-3738468 (Clockwise)
Preceding gene: 126454596
Following gene: 126454357
Centisome position: 93.71
GC content: 65.77
Gene sequence:
>999_bases ATGTACACGCAATCCCTCGACATCCCCGGCAACATCGCGCCGATCGATGCCGCCGCCGATTCGCCCGAACAGGCAGGATT CGATGCCGCCATCGCCGCCGACGGCAAGATCGAACCGCAGGACTGGATGCCCGACGCTTACCGCAAGACGCTCGTGCGGC AGATTTCGCAGCACGCGCACTCGGAAGTCGTCGGCATGCTGCCGGAAGGCAACTGGATCACGCGCGCCCCGAGCCTCAAG CGCAAGGCGATCCTGCTCGCGAAGGTCCAGGACGAAGCCGGTCACGGCCTCTATCTATATAGCGCCGCGGAAACGCTCGG CGTATCGCGCGATGCGCTGATCGACGCGCTGCACGCGGGCAAAGCCAAGTATTCGAGCATCTTCAATTACCCCACCCTCA CGTGGGCGGATGTCGGCGTGATCGGCTGGCTCGTCGACGGCGCGGCGATCATGAACCAGGTTCCGCTCTGCCGCTGCACG TACGGCCCGTATGCGCGCGCGATGATCCGCGTCTGCAAGGAGGAATCGTTCCATCAGCGGCAAGGCTTCGACGCGCTGCT CGCGATGATGAAGGGCACCGACGCGCAGCGCGCGATGGTCCAGGAAGCCGTGGACCGCTGGTGGTGGCCCGTGCTGATGA TGTTCGGGCCGCCCGACGCCGATTCCGTCCACAGCAACCAGTCGGCCAAATGGGGGATCAAGCGGATTTCGAACGACGAC CTGCGGCAGAAATTCGTCGACGCGACGGTCGAGCAGGCGAAGGTGCTCGGCGTCACGCTGCCCGATCCGGACCTCAAGTG GAACGACGCCCGCGGCCATTTCGATTACGGCGCGCTCGACTGGGACGAATTCTGGCGCGTCGTCAACGGCGACGGCCCGT GCAACAAGGAGCGCCTCGCGACCCGCGTGAAGGCTCACGAAAACGGCGCGTGGGTTCGCGACGCCGCGCTCGCGCACGAG GAAAAGCGCCGCCGTCGCGCGCAGCAACAAGCGGCCTAA
Upstream 100 bases:
>100_bases CTCGCACCGCGAATCTTGCCCATCCGCTAAAATGATATATTAACCGACCGGTCGGTTGGTTTATAATGCGTGAACATTCC ACCTGGACGAGAACATCGCC
Downstream 100 bases:
>100_bases CCGGCATGACGCGCGGCAAGCGCGGTGCCGCGATCCGCATTCAGGAGATTCAGGAGAAAGCGATGAACAACGAATGGCCC ATCTGGGAAGTTTTCGTGCG
Product: phenylacetate-CoA oxygenase subunit PaaA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 332; Mature: 332
Protein sequence:
>332_residues MYTQSLDIPGNIAPIDAAADSPEQAGFDAAIAADGKIEPQDWMPDAYRKTLVRQISQHAHSEVVGMLPEGNWITRAPSLK RKAILLAKVQDEAGHGLYLYSAAETLGVSRDALIDALHAGKAKYSSIFNYPTLTWADVGVIGWLVDGAAIMNQVPLCRCT YGPYARAMIRVCKEESFHQRQGFDALLAMMKGTDAQRAMVQEAVDRWWWPVLMMFGPPDADSVHSNQSAKWGIKRISNDD LRQKFVDATVEQAKVLGVTLPDPDLKWNDARGHFDYGALDWDEFWRVVNGDGPCNKERLATRVKAHENGAWVRDAALAHE EKRRRRAQQQAA
Sequences:
>Translated_332_residues MYTQSLDIPGNIAPIDAAADSPEQAGFDAAIAADGKIEPQDWMPDAYRKTLVRQISQHAHSEVVGMLPEGNWITRAPSLK RKAILLAKVQDEAGHGLYLYSAAETLGVSRDALIDALHAGKAKYSSIFNYPTLTWADVGVIGWLVDGAAIMNQVPLCRCT YGPYARAMIRVCKEESFHQRQGFDALLAMMKGTDAQRAMVQEAVDRWWWPVLMMFGPPDADSVHSNQSAKWGIKRISNDD LRQKFVDATVEQAKVLGVTLPDPDLKWNDARGHFDYGALDWDEFWRVVNGDGPCNKERLATRVKAHENGAWVRDAALAHE EKRRRRAQQQAA >Mature_332_residues MYTQSLDIPGNIAPIDAAADSPEQAGFDAAIAADGKIEPQDWMPDAYRKTLVRQISQHAHSEVVGMLPEGNWITRAPSLK RKAILLAKVQDEAGHGLYLYSAAETLGVSRDALIDALHAGKAKYSSIFNYPTLTWADVGVIGWLVDGAAIMNQVPLCRCT YGPYARAMIRVCKEESFHQRQGFDALLAMMKGTDAQRAMVQEAVDRWWWPVLMMFGPPDADSVHSNQSAKWGIKRISNDD LRQKFVDATVEQAKVLGVTLPDPDLKWNDARGHFDYGALDWDEFWRVVNGDGPCNKERLATRVKAHENGAWVRDAALAHE EKRRRRAQQQAA
Specific function: May be part of a multicomponent oxygenase involved in phenylacetyl-CoA hydroxylation [H]
COG id: COG3396
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1787654, Length=300, Percent_Identity=66, Blast_Score=439, Evalue=1e-124,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012347 - InterPro: IPR009078 - InterPro: IPR011881 - InterPro: IPR007814 [H]
Pfam domain/function: PF05138 PaaA_PaaC [H]
EC number: NA
Molecular weight: Translated: 37012; Mature: 37012
Theoretical pI: Translated: 6.60; Mature: 6.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYTQSLDIPGNIAPIDAAADSPEQAGFDAAIAADGKIEPQDWMPDAYRKTLVRQISQHAH CCCCCCCCCCCCCCCCCCCCCCHHCCCCEEEECCCCCCCHHCCCHHHHHHHHHHHHHHHH SEVVGMLPEGNWITRAPSLKRKAILLAKVQDEAGHGLYLYSAAETLGVSRDALIDALHAG HHHEEECCCCCEEECCCCCHHHEEEEEEECCCCCCCEEEEECHHHHCCCHHHHHHHHHHC KAKYSSIFNYPTLTWADVGVIGWLVDGAAIMNQVPLCRCTYGPYARAMIRVCKEESFHQR CHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHHH QGFDALLAMMKGTDAQRAMVQEAVDRWWWPVLMMFGPPDADSVHSNQSAKWGIKRISNDD CCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCHHHHHHHCCCHH LRQKFVDATVEQAKVLGVTLPDPDLKWNDARGHFDYGALDWDEFWRVVNGDGPCNKERLA HHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHEECCCCCCCHHHHH TRVKAHENGAWVRDAALAHEEKRRRRAQQQAA HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MYTQSLDIPGNIAPIDAAADSPEQAGFDAAIAADGKIEPQDWMPDAYRKTLVRQISQHAH CCCCCCCCCCCCCCCCCCCCCCHHCCCCEEEECCCCCCCHHCCCHHHHHHHHHHHHHHHH SEVVGMLPEGNWITRAPSLKRKAILLAKVQDEAGHGLYLYSAAETLGVSRDALIDALHAG HHHEEECCCCCEEECCCCCHHHEEEEEEECCCCCCCEEEEECHHHHCCCHHHHHHHHHHC KAKYSSIFNYPTLTWADVGVIGWLVDGAAIMNQVPLCRCTYGPYARAMIRVCKEESFHQR CHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHHH QGFDALLAMMKGTDAQRAMVQEAVDRWWWPVLMMFGPPDADSVHSNQSAKWGIKRISNDD CCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCHHHHHHHCCCHH LRQKFVDATVEQAKVLGVTLPDPDLKWNDARGHFDYGALDWDEFWRVVNGDGPCNKERLA HHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHEECCCCCCCHHHHH TRVKAHENGAWVRDAALAHEEKRRRRAQQQAA HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9748275; 9278503; 10766858 [H]