| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
Click here to switch to the map view.
The map label for this gene is 126453492
Identifier: 126453492
GI number: 126453492
Start: 3641890
End: 3642159
Strand: Reverse
Name: 126453492
Synonym: BURPS1106A_3730
Alternate gene names: NA
Gene position: 3642159-3641890 (Counterclockwise)
Preceding gene: 126454990
Following gene: 126452846
Centisome position: 91.32
GC content: 73.33
Gene sequence:
>270_bases GTGAGCCGCTTCGACTCGGGCGCCACGCTGACCCACGCGAGCGCGAAAGCCGCGCTCGCCCAAGGGCTCGCGCGCATCGA GGCGGGCGCCACCGCCGTCGACTGCGGCGCGCTCGCGCAATTCGATTCGTCGGCGCTCGCGGTGCTGCTCGCCTGGCAGC GCGCCGCGCGCGCGCGCGGCGTGACGCTAGACATCGAGAACCTGCCGCCGAAGCTCGCGAGCCTCGCGCAGGCGTACGGG ATCGACACGCTTCTCTCCGGGCGACATTGA
Upstream 100 bases:
>100_bases AGCAGCAGTTCAGCGAGAAGATCCAGCAAAGCGGCGTGGAGGGGCTGATCCAGTTCCTGACCGAACGCAACCAGCAGCTT GCCTCGGGCAAGCAGGCATC
Downstream 100 bases:
>100_bases CGCCCGCGTCCGGGCTCGCCCACGGCCGTCGCGCCCGTGGGCGAGCCGCTGCCTTTCCGTTGATCAACAGGGCCCGCGCC GGCCGGGCCGGGCGCGGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 89; Mature: 88
Protein sequence:
>89_residues MSRFDSGATLTHASAKAALAQGLARIEAGATAVDCGALAQFDSSALAVLLAWQRAARARGVTLDIENLPPKLASLAQAYG IDTLLSGRH
Sequences:
>Translated_89_residues MSRFDSGATLTHASAKAALAQGLARIEAGATAVDCGALAQFDSSALAVLLAWQRAARARGVTLDIENLPPKLASLAQAYG IDTLLSGRH >Mature_88_residues SRFDSGATLTHASAKAALAQGLARIEAGATAVDCGALAQFDSSALAVLLAWQRAARARGVTLDIENLPPKLASLAQAYGI DTLLSGRH
Specific function: Unknown
COG id: COG3113
COG function: function code R; Predicted NTP binding protein (contains STAS domain)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9133; Mature: 9002
Theoretical pI: Translated: 8.54; Mature: 8.54
Prosite motif: PS50801 STAS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRFDSGATLTHASAKAALAQGLARIEAGATAVDCGALAQFDSSALAVLLAWQRAARARG CCCCCCCCEECHHHHHHHHHHHHHHHHCCCCEECHHHHHHCCCHHHHHHHHHHHHHHHCC VTLDIENLPPKLASLAQAYGIDTLLSGRH CEEECCCCCHHHHHHHHHHCCHHHCCCCC >Mature Secondary Structure SRFDSGATLTHASAKAALAQGLARIEAGATAVDCGALAQFDSSALAVLLAWQRAARARG CCCCCCCEECHHHHHHHHHHHHHHHHCCCCEECHHHHHHCCCHHHHHHHHHHHHHHHCC VTLDIENLPPKLASLAQAYGIDTLLSGRH CEEECCCCCHHHHHHHHHHCCHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA