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The map label for this gene is 126453490

Identifier: 126453490

GI number: 126453490

Start: 1546376

End: 1548952

Strand: Reverse

Name: 126453490

Synonym: BURPS1106A_1597

Alternate gene names: NA

Gene position: 1548952-1546376 (Counterclockwise)

Preceding gene: 126454588

Following gene: 126453045

Centisome position: 38.84

GC content: 68.84

Gene sequence:

>2577_bases
ATGCGGCATCGCACGATGCCGACGGCGCCGGATGCGAAGCCGGCGCCACGGCGCGCGCTTGCGCAAGCCATGCCGAAACG
CCCCGGCGGCGGCGCGCGAACGATCGTCGTGAACGGCCCGTTCGAACGCACGGGCGAGCTTGAATCCACAGGAGGGACCA
TGAGAACAATACGCATGGCGTCGATCGACGTCAGACTCTTCATATTCGGACTGCTGCTCTTCTTGTCGGGCCTCGCGCAC
GCGGACACGCCGAGCGCCGCGCAGCCGTCGCCCTACGGCATCGTGTCCGTCGACATCGACGGCACGCGGCTGTGCATGGA
AGTCGGCGGCGCCGCCGTGGCGCCGCTCGCGGGCGTCGACGTCGGCGAATGCCGGCAGAGTGCCGATCAGCAATGGTCGC
TCGTGCCCAACGGGCAGAATTTCCAGGTGGTCGCCAAGCACAGTCTGCAATGCCTGACGATCGCGAACGCCGCGACGTCG
CCGGGCGCGCCACTCGTGCAGTACCCGTGCAACGGCGGCTCGAATCAGCAATGGAGCGTCTCCCCATCGCGCTCCGGCTA
CAAGCTCGTGTCCGCGCACGACGCGCTGTGCGCGAGCGCCGCCGGTGCGTCGCCCGGCTCGCGGATGGTTCAGCAGCGAT
GCGACGAGCATGCGTCGCAAACGCTCTACGTGTCCGCGCCGCCCGAGCTCGTCGGCGCGCTCATCGGCATGAACGGCGGG
CTTTGCATCGACGGCGGCGCGGCCGGCGCGCAAGCCGTGCAACGCACGTGCGACGACGCGCCCGGCCAGCAATGGCGAAT
CCGTCCGAACGGCAGCGCCTACAAGATCCACCTCGCCTCGACGAACCTGTGCCTCGGCACGCGCGACGCATCGCGGGGCA
CGGGCGCCGCGATCGAGAGCCAACGCTGCGCGAATGTCGCGAGCCAGTTGTGGACGATCCGCGCGGCAAGCGAAGTCGAC
GGCAGGAACGGCTACGCGAACGGGTACTGGCAGTTCGTATCGGCAAACAGCGGCCAGTGCATCGTCGTGCAGAACGCTTC
CACCGCCGACGGCGCGAATCTGATCCAGTATCCGTGCGGCCAGGGCAACGCGGGCTCGAACACGATGTGGCGCGTCAACC
GGACATCGCGTTCGTCCTGGACGGGCGCGATCGCGCTGCCGCTCGTTCCGTCGGCCGCCGCGCACCTGCCGGACGGCAAG
ATCCTGATGTGGTCGGCGGATTCGACGATCTCGTTCGGCGGCGGCGGCGTCGACGGCAACACCTACACGACCGTGTTCGA
TCCGATCGCGCAAAAGGCAACCGATGCCGTGCTGACGAGCCTCGGCCACGACATGTTCTGCCCCGGCCTCAATCTGCTCG
CGGACGGCAAGATCTTCGTGAACGGCGGCGTGTCCAGCAGAAAGACCAGCGTCTACGATCCGGCCACGCACGCGTGGAGC
CCGTCGAACCTGATGAACATTGCGCGCGGATACCAATCGAGCGTCACGCTGTCCGACGGCGCGGTCTTCACGCTCGGCGG
CTCATGGAACGTCGCGACGCCCGACTTCCGGCTCGGCGACAAGTACGGCGAAGTGTGGCGGCCCGACAGCGGCTGGTCGA
TCCTGTCGAACGTACCCGACATCATCGGCCCCGATCCCGCGGGCGCCTATCGCGGCGACAATCACATGTGGCTCGTCGCG
GCCCGCGACCGCTGGGTCTTCTACGCGGGCCCCGATGCGACGCTGCGCTGGATCGACACGACGGGCAACGGCAGGATCGT
CGAGGCCGGCAAGCGCGGCGACGATGCGTACTCGATCAGCGGCAACGCCGTCATGTACGACGTCGGCAAGGTCCTCACCG
TCGGCGGCGCGCCGGCGTACGACAACGGCGTCGCGTCGGCGAGCGCATACGTGATCGACATCTCGGCGGGCCCGCAAGTC
CCGCCCGTCGTGCGCAAGGTGCAGCCGCTCGCGTACAGCCGCGGCTTCGTCAACAGCGTGGTGCTGCCGAACGGGCAAGT
CGTCGCGATCGGCGGGCAGGCGGTGACGATTCCGTTCTCCGACGATCAATCGGTGCTCGTGCCCGAACTGTGGGACCCGT
CCACCGAGGCCTTCACGCGCCTCGCGCCGATGACGGTGCCGCGCAACTATCACAGCGAGGCGCTGCTGCTGCCGGACGGC
CGCGTGATGGCTTCGGGCGGCGGGCTGTGCGGAAGCGGCTGCAACACCAACCATCCGAACGTGCAGATCCTCACGCCGCC
CTATCTGCTCAACGCGGACGGCACGGCGGCGAGCCGCCCCGTGATCGCCGCCGCGCCGGAGCAGGCCGCCAACGGCTCGA
CGATCGCCGTATCGACGGATGCGCCGATCCGCAGCTTCGCGCTGGTGCGGATGTCGTCGAGCACGCACTCGGTCAACACC
GACCAGCGCCGCATTCCGCTCACGTTCCGGCAGTCGTCCGGCGGCGACGGCGGCTATGCGTACACCGTCGCGATTCCGGC
GGACGCCGGCGTCGCGATACCGGGGCAGTACATGCTGTTCGCGCTGAACGCGGGGGGCGTGCCGAGCGTCGCGAAGACGA
TCCGGATCGGCGCCTGA

Upstream 100 bases:

>100_bases
CTTTCATTCCCATCGCGCGTGATTCAGAAAAGTTCAAACCCCCAAATGGTTCGCATCCCTACACTCACGACCGACTCATC
CGCGCGGCCGTGCGCGGCGC

Downstream 100 bases:

>100_bases
AGGCGAGAAGGCAAGGAGCGCGAACGATGTCCATCGCTTCCCCGGTTCGGCCGCCGCGGCGCCGCGTCGCGCGCGCGCTC
GTGCTCGCCGCCTTCGTCGC

Product: ricin-type beta-trefoil lectin domain/galactose oxidase domain-containing protein

Products: NA

Alternate protein names: Galactose Oxidase; Kelch Domain Protein; Kelch Domain-Containing Protein; Arabinogalactan Endo-1 4-Beta-Galactosidase; Kelch Repeat-Containing Protein; Beta-Xylosidase; Pectate Lyase; Kelch Domain Containing Protein; Pectate Lyase-Like Protein; Exported Oxidase; Lectin Repeat-Containing Protein

Number of amino acids: Translated: 858; Mature: 858

Protein sequence:

>858_residues
MRHRTMPTAPDAKPAPRRALAQAMPKRPGGGARTIVVNGPFERTGELESTGGTMRTIRMASIDVRLFIFGLLLFLSGLAH
ADTPSAAQPSPYGIVSVDIDGTRLCMEVGGAAVAPLAGVDVGECRQSADQQWSLVPNGQNFQVVAKHSLQCLTIANAATS
PGAPLVQYPCNGGSNQQWSVSPSRSGYKLVSAHDALCASAAGASPGSRMVQQRCDEHASQTLYVSAPPELVGALIGMNGG
LCIDGGAAGAQAVQRTCDDAPGQQWRIRPNGSAYKIHLASTNLCLGTRDASRGTGAAIESQRCANVASQLWTIRAASEVD
GRNGYANGYWQFVSANSGQCIVVQNASTADGANLIQYPCGQGNAGSNTMWRVNRTSRSSWTGAIALPLVPSAAAHLPDGK
ILMWSADSTISFGGGGVDGNTYTTVFDPIAQKATDAVLTSLGHDMFCPGLNLLADGKIFVNGGVSSRKTSVYDPATHAWS
PSNLMNIARGYQSSVTLSDGAVFTLGGSWNVATPDFRLGDKYGEVWRPDSGWSILSNVPDIIGPDPAGAYRGDNHMWLVA
ARDRWVFYAGPDATLRWIDTTGNGRIVEAGKRGDDAYSISGNAVMYDVGKVLTVGGAPAYDNGVASASAYVIDISAGPQV
PPVVRKVQPLAYSRGFVNSVVLPNGQVVAIGGQAVTIPFSDDQSVLVPELWDPSTEAFTRLAPMTVPRNYHSEALLLPDG
RVMASGGGLCGSGCNTNHPNVQILTPPYLLNADGTAASRPVIAAAPEQAANGSTIAVSTDAPIRSFALVRMSSSTHSVNT
DQRRIPLTFRQSSGGDGGYAYTVAIPADAGVAIPGQYMLFALNAGGVPSVAKTIRIGA

Sequences:

>Translated_858_residues
MRHRTMPTAPDAKPAPRRALAQAMPKRPGGGARTIVVNGPFERTGELESTGGTMRTIRMASIDVRLFIFGLLLFLSGLAH
ADTPSAAQPSPYGIVSVDIDGTRLCMEVGGAAVAPLAGVDVGECRQSADQQWSLVPNGQNFQVVAKHSLQCLTIANAATS
PGAPLVQYPCNGGSNQQWSVSPSRSGYKLVSAHDALCASAAGASPGSRMVQQRCDEHASQTLYVSAPPELVGALIGMNGG
LCIDGGAAGAQAVQRTCDDAPGQQWRIRPNGSAYKIHLASTNLCLGTRDASRGTGAAIESQRCANVASQLWTIRAASEVD
GRNGYANGYWQFVSANSGQCIVVQNASTADGANLIQYPCGQGNAGSNTMWRVNRTSRSSWTGAIALPLVPSAAAHLPDGK
ILMWSADSTISFGGGGVDGNTYTTVFDPIAQKATDAVLTSLGHDMFCPGLNLLADGKIFVNGGVSSRKTSVYDPATHAWS
PSNLMNIARGYQSSVTLSDGAVFTLGGSWNVATPDFRLGDKYGEVWRPDSGWSILSNVPDIIGPDPAGAYRGDNHMWLVA
ARDRWVFYAGPDATLRWIDTTGNGRIVEAGKRGDDAYSISGNAVMYDVGKVLTVGGAPAYDNGVASASAYVIDISAGPQV
PPVVRKVQPLAYSRGFVNSVVLPNGQVVAIGGQAVTIPFSDDQSVLVPELWDPSTEAFTRLAPMTVPRNYHSEALLLPDG
RVMASGGGLCGSGCNTNHPNVQILTPPYLLNADGTAASRPVIAAAPEQAANGSTIAVSTDAPIRSFALVRMSSSTHSVNT
DQRRIPLTFRQSSGGDGGYAYTVAIPADAGVAIPGQYMLFALNAGGVPSVAKTIRIGA
>Mature_858_residues
MRHRTMPTAPDAKPAPRRALAQAMPKRPGGGARTIVVNGPFERTGELESTGGTMRTIRMASIDVRLFIFGLLLFLSGLAH
ADTPSAAQPSPYGIVSVDIDGTRLCMEVGGAAVAPLAGVDVGECRQSADQQWSLVPNGQNFQVVAKHSLQCLTIANAATS
PGAPLVQYPCNGGSNQQWSVSPSRSGYKLVSAHDALCASAAGASPGSRMVQQRCDEHASQTLYVSAPPELVGALIGMNGG
LCIDGGAAGAQAVQRTCDDAPGQQWRIRPNGSAYKIHLASTNLCLGTRDASRGTGAAIESQRCANVASQLWTIRAASEVD
GRNGYANGYWQFVSANSGQCIVVQNASTADGANLIQYPCGQGNAGSNTMWRVNRTSRSSWTGAIALPLVPSAAAHLPDGK
ILMWSADSTISFGGGGVDGNTYTTVFDPIAQKATDAVLTSLGHDMFCPGLNLLADGKIFVNGGVSSRKTSVYDPATHAWS
PSNLMNIARGYQSSVTLSDGAVFTLGGSWNVATPDFRLGDKYGEVWRPDSGWSILSNVPDIIGPDPAGAYRGDNHMWLVA
ARDRWVFYAGPDATLRWIDTTGNGRIVEAGKRGDDAYSISGNAVMYDVGKVLTVGGAPAYDNGVASASAYVIDISAGPQV
PPVVRKVQPLAYSRGFVNSVVLPNGQVVAIGGQAVTIPFSDDQSVLVPELWDPSTEAFTRLAPMTVPRNYHSEALLLPDG
RVMASGGGLCGSGCNTNHPNVQILTPPYLLNADGTAASRPVIAAAPEQAANGSTIAVSTDAPIRSFALVRMSSSTHSVNT
DQRRIPLTFRQSSGGDGGYAYTVAIPADAGVAIPGQYMLFALNAGGVPSVAKTIRIGA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 89435; Mature: 89435

Theoretical pI: Translated: 7.45; Mature: 7.45

Prosite motif: PS50231 RICIN_B_LECTIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRHRTMPTAPDAKPAPRRALAQAMPKRPGGGARTIVVNGPFERTGELESTGGTMRTIRMA
CCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCCCEEEEEEE
SIDVRLFIFGLLLFLSGLAHADTPSAAQPSPYGIVSVDIDGTRLCMEVGGAAVAPLAGVD
EEHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCEEEEHHCCCEECCCCCCC
VGECRQSADQQWSLVPNGQNFQVVAKHSLQCLTIANAATSPGAPLVQYPCNGGSNQQWSV
HHHHHHCCCCCEEECCCCCCEEEEECCCEEEEEEECCCCCCCCCEEEECCCCCCCCEEEE
SPSRSGYKLVSAHDALCASAAGASPGSRMVQQRCDEHASQTLYVSAPPELVGALIGMNGG
CCCCCCEEEEEHHHHHHHHCCCCCCHHHHHHHHHHHHCCCEEEEECCHHHHHHHHCCCCC
LCIDGGAAGAQAVQRTCDDAPGQQWRIRPNGSAYKIHLASTNLCLGTRDASRGTGAAIES
EEEECCCHHHHHHHHHHCCCCCCEEEECCCCCEEEEEEECCCEEEECCCCCCCCCCCHHH
QRCANVASQLWTIRAASEVDGRNGYANGYWQFVSANSGQCIVVQNASTADGANLIQYPCG
HHHHHHHHHHEEEEECCCCCCCCCCCCCEEEEEECCCCCEEEEECCCCCCCCCEEEECCC
QGNAGSNTMWRVNRTSRSSWTGAIALPLVPSAAAHLPDGKILMWSADSTISFGGGGVDGN
CCCCCCCCEEEEECCCCCCCCCEEEECCCCCHHHCCCCCCEEEEECCCEEECCCCCCCCC
TYTTVFDPIAQKATDAVLTSLGHDMFCPGLNLLADGKIFVNGGVSSRKTSVYDPATHAWS
EEEEEEHHHHHHHHHHHHHHCCCCCCCCCCCEEECCEEEEECCCCCCCCCCCCCCCCCCC
PSNLMNIARGYQSSVTLSDGAVFTLGGSWNVATPDFRLGDKYGEVWRPDSGWSILSNVPD
HHHHHHHHCCCCCEEEECCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCH
IIGPDPAGAYRGDNHMWLVAARDRWVFYAGPDATLRWIDTTGNGRIVEAGKRGDDAYSIS
HCCCCCCCCCCCCCEEEEEEECCCEEEEECCCCEEEEEEECCCCEEEECCCCCCCEEEEC
GNAVMYDVGKVLTVGGAPAYDNGVASASAYVIDISAGPQVPPVVRKVQPLAYSRGFVNSV
CCEEEEECCEEEEECCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHCHHHHCCCCCCEE
VLPNGQVVAIGGQAVTIPFSDDQSVLVPELWDPSTEAFTRLAPMTVPRNYHSEALLLPDG
ECCCCCEEEECCEEEEEEECCCCCEECCCCCCCCHHHHHHHCCEECCCCCCCCEEECCCC
RVMASGGGLCGSGCNTNHPNVQILTPPYLLNADGTAASRPVIAAAPEQAANGSTIAVSTD
EEEECCCCEECCCCCCCCCCEEEECCCEEECCCCCCCCCCEEEECCCCCCCCCEEEEECC
APIRSFALVRMSSSTHSVNTDQRRIPLTFRQSSGGDGGYAYTVAIPADAGVAIPGQYMLF
CCCCEEEEEEECCCCCCCCCCCEEEEEEEECCCCCCCCEEEEEEEECCCCEECCCCEEEE
ALNAGGVPSVAKTIRIGA
EECCCCCCHHHHEEECCC
>Mature Secondary Structure
MRHRTMPTAPDAKPAPRRALAQAMPKRPGGGARTIVVNGPFERTGELESTGGTMRTIRMA
CCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCCCEEEEEEE
SIDVRLFIFGLLLFLSGLAHADTPSAAQPSPYGIVSVDIDGTRLCMEVGGAAVAPLAGVD
EEHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCEEEEHHCCCEECCCCCCC
VGECRQSADQQWSLVPNGQNFQVVAKHSLQCLTIANAATSPGAPLVQYPCNGGSNQQWSV
HHHHHHCCCCCEEECCCCCCEEEEECCCEEEEEEECCCCCCCCCEEEECCCCCCCCEEEE
SPSRSGYKLVSAHDALCASAAGASPGSRMVQQRCDEHASQTLYVSAPPELVGALIGMNGG
CCCCCCEEEEEHHHHHHHHCCCCCCHHHHHHHHHHHHCCCEEEEECCHHHHHHHHCCCCC
LCIDGGAAGAQAVQRTCDDAPGQQWRIRPNGSAYKIHLASTNLCLGTRDASRGTGAAIES
EEEECCCHHHHHHHHHHCCCCCCEEEECCCCCEEEEEEECCCEEEECCCCCCCCCCCHHH
QRCANVASQLWTIRAASEVDGRNGYANGYWQFVSANSGQCIVVQNASTADGANLIQYPCG
HHHHHHHHHHEEEEECCCCCCCCCCCCCEEEEEECCCCCEEEEECCCCCCCCCEEEECCC
QGNAGSNTMWRVNRTSRSSWTGAIALPLVPSAAAHLPDGKILMWSADSTISFGGGGVDGN
CCCCCCCCEEEEECCCCCCCCCEEEECCCCCHHHCCCCCCEEEEECCCEEECCCCCCCCC
TYTTVFDPIAQKATDAVLTSLGHDMFCPGLNLLADGKIFVNGGVSSRKTSVYDPATHAWS
EEEEEEHHHHHHHHHHHHHHCCCCCCCCCCCEEECCEEEEECCCCCCCCCCCCCCCCCCC
PSNLMNIARGYQSSVTLSDGAVFTLGGSWNVATPDFRLGDKYGEVWRPDSGWSILSNVPD
HHHHHHHHCCCCCEEEECCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCH
IIGPDPAGAYRGDNHMWLVAARDRWVFYAGPDATLRWIDTTGNGRIVEAGKRGDDAYSIS
HCCCCCCCCCCCCCEEEEEEECCCEEEEECCCCEEEEEEECCCCEEEECCCCCCCEEEEC
GNAVMYDVGKVLTVGGAPAYDNGVASASAYVIDISAGPQVPPVVRKVQPLAYSRGFVNSV
CCEEEEECCEEEEECCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHCHHHHCCCCCCEE
VLPNGQVVAIGGQAVTIPFSDDQSVLVPELWDPSTEAFTRLAPMTVPRNYHSEALLLPDG
ECCCCCEEEECCEEEEEEECCCCCEECCCCCCCCHHHHHHHCCEECCCCCCCCEEECCCC
RVMASGGGLCGSGCNTNHPNVQILTPPYLLNADGTAASRPVIAAAPEQAANGSTIAVSTD
EEEECCCCEECCCCCCCCCCEEEECCCEEECCCCCCCCCCEEEECCCCCCCCCEEEEECC
APIRSFALVRMSSSTHSVNTDQRRIPLTFRQSSGGDGGYAYTVAIPADAGVAIPGQYMLF
CCCCEEEEEEECCCCCCCCCCCEEEEEEEECCCCCCCCEEEEEEEECCCCEECCCCEEEE
ALNAGGVPSVAKTIRIGA
EECCCCCCHHHHEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA