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The map label for this gene is regB [H]

Identifier: 126453480

GI number: 126453480

Start: 187363

End: 188643

Strand: Direct

Name: regB [H]

Synonym: BURPS1106A_0198

Alternate gene names: 126453480

Gene position: 187363-188643 (Clockwise)

Preceding gene: 126454885

Following gene: 126452974

Centisome position: 4.7

GC content: 69.01

Gene sequence:

>1281_bases
ATGCAACGAATCACCACTACCGGACGCGTCAACCTGAGCCATCTGTTCTGGTTGCGCAATCTCGCGATCATCGGCCAACT
CGTCACGATCGCCGTCGTACAGACTTATTTCGGCGTCCATTTGCCGTTGCCTGCGATGCTGATGGTGATCGCGCTCGAAA
TCGTGTTCAACGCGCTCACGTGGGTGCGCGTGCTGCGCGCGCGGCCCGAGACCAATTTCGAGCTGCTCGGCCAGCTGTGG
GTCGACCTCGGCGCGCTGTCGGCGCTGCTCTTCCTGTCGGGCGGGACCACGAACCCGTTCGTTTCGCTGTACCTGCCGTC
GCTCGCGATCGCGGCCGCGGTGCTGCCGTGGCACCTGATGATCTGGCTGGCGGCGTTCGCGGTGGCGTGCTACCTCGCGC
TCGGCTTCGATTCGGTGCCGCTCAACCTGGATAATCCCGCGAACCTGTTCGATTATTTTCGTGCGGGCATGTGGGTGAAC
TTCATGGTGAGCGTCGGGCTCATCGCGTGGTTCGTCGCGCGGATGTCGAGCGCGCTGCGCCAGCGCGACGCGGCGCTCGG
CGAGGCGCAGCAGGCGCTGTTGCGCGACGAGCGCGCGGTCGCGCTCGGCGTGCAGGCGGCCACCGTCGCGCACGAGATGG
GCACCCCGCTGTCGACGATCGCGATGCTGACCGAGGAATTGCGCGAGGCCGCCCGCACGGACGCGGGGCTCGCGCGCTAC
GATGCGGACCTGAAGGTGCTCGAGGAGCAGATGTCGCAGTGCACGTCGGCGCTCGCGCGCCTGAGAAGCCGCGCGTCGGA
GCGGCCGAGCCGCGAACCCGTCGGCGAGTGGCTCGACACGTTCGTCGAGCATTGGCGGCTGCGCCATCCGCACGTGCTGT
TCGAGCAACGGGGGCCGCAGCCCGTGGGCGTCGCGCTCGACGATACGGTCGCGGTCGGCCAGATCCTGACCATCCTGCTC
GACAATGCCGCGCGCGCGAGCCGCGATCGCGTTACGCTGGCGGCAACGATCGCGCACGACGGCGCACGCGACGAAATCGA
GTTCGAGGTTTGCGATAACGGGCCGGGCATTCCGGCCGCCTTGCGCGACACGCTCGGCGCGGCGCCCGTCGACAGCACGC
AGGGCGGCCACGGGGTGGGCCTGTACCTGGCGTTCAGCGCGGCGGCGCGCCTGGGCGGCTCGATCGAGCTCGCCGACGCG
CAGCCGCGCGGCACGCGGGCGATCCTGCGGCTACCGGTCGCACGTCAGGTGGCGGCCGAGATGGCGAACGAAAACGGATA
G

Upstream 100 bases:

>100_bases
CGTGCCTCGCCGACGAGATCGCCCGGCGAGTCGCCGCGAGCACGGCGGGCGAAGGGCCGGCTCGCCCCGAGCGCGAAGAC
TGAGAAGGTAAACTGCGCGG

Downstream 100 bases:

>100_bases
ACCAGATGGAGTGATGCAAATGAGCGACAAGAATTTCCTCGTGATCGACGACAACGAAGTGTTTGCCGGCACGCTGGCGC
GCGGGCTCGAGCGCCGCGGC

Product: sensor histidine kinase

Products: NA

Alternate protein names: Protein prrB [H]

Number of amino acids: Translated: 426; Mature: 426

Protein sequence:

>426_residues
MQRITTTGRVNLSHLFWLRNLAIIGQLVTIAVVQTYFGVHLPLPAMLMVIALEIVFNALTWVRVLRARPETNFELLGQLW
VDLGALSALLFLSGGTTNPFVSLYLPSLAIAAAVLPWHLMIWLAAFAVACYLALGFDSVPLNLDNPANLFDYFRAGMWVN
FMVSVGLIAWFVARMSSALRQRDAALGEAQQALLRDERAVALGVQAATVAHEMGTPLSTIAMLTEELREAARTDAGLARY
DADLKVLEEQMSQCTSALARLRSRASERPSREPVGEWLDTFVEHWRLRHPHVLFEQRGPQPVGVALDDTVAVGQILTILL
DNAARASRDRVTLAATIAHDGARDEIEFEVCDNGPGIPAALRDTLGAAPVDSTQGGHGVGLYLAFSAAARLGGSIELADA
QPRGTRAILRLPVARQVAAEMANENG

Sequences:

>Translated_426_residues
MQRITTTGRVNLSHLFWLRNLAIIGQLVTIAVVQTYFGVHLPLPAMLMVIALEIVFNALTWVRVLRARPETNFELLGQLW
VDLGALSALLFLSGGTTNPFVSLYLPSLAIAAAVLPWHLMIWLAAFAVACYLALGFDSVPLNLDNPANLFDYFRAGMWVN
FMVSVGLIAWFVARMSSALRQRDAALGEAQQALLRDERAVALGVQAATVAHEMGTPLSTIAMLTEELREAARTDAGLARY
DADLKVLEEQMSQCTSALARLRSRASERPSREPVGEWLDTFVEHWRLRHPHVLFEQRGPQPVGVALDDTVAVGQILTILL
DNAARASRDRVTLAATIAHDGARDEIEFEVCDNGPGIPAALRDTLGAAPVDSTQGGHGVGLYLAFSAAARLGGSIELADA
QPRGTRAILRLPVARQVAAEMANENG
>Mature_426_residues
MQRITTTGRVNLSHLFWLRNLAIIGQLVTIAVVQTYFGVHLPLPAMLMVIALEIVFNALTWVRVLRARPETNFELLGQLW
VDLGALSALLFLSGGTTNPFVSLYLPSLAIAAAVLPWHLMIWLAAFAVACYLALGFDSVPLNLDNPANLFDYFRAGMWVN
FMVSVGLIAWFVARMSSALRQRDAALGEAQQALLRDERAVALGVQAATVAHEMGTPLSTIAMLTEELREAARTDAGLARY
DADLKVLEEQMSQCTSALARLRSRASERPSREPVGEWLDTFVEHWRLRHPHVLFEQRGPQPVGVALDDTVAVGQILTILL
DNAARASRDRVTLAATIAHDGARDEIEFEVCDNGPGIPAALRDTLGAAPVDSTQGGHGVGLYLAFSAAARLGGSIELADA
QPRGTRAILRLPVARQVAAEMANENG

Specific function: Member of the two-component regulatory system RegB/RegA. Involved in the positive regulation of photosynthesis gene expression in response to anaerobiosis. Also involved in positive regulation of the cbbI and cbbII Calvin cycle CO2 fixation operons, as we

COG id: COG0642

COG function: function code T; Signal transduction histidine kinase

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 histidine kinase domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR004358
- InterPro:   IPR003661
- InterPro:   IPR005467
- InterPro:   IPR009082 [H]

Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 46242; Mature: 46242

Theoretical pI: Translated: 5.84; Mature: 5.84

Prosite motif: PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHCCCC
>Mature Secondary Structure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HHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7751278; 10358089 [H]