| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is 126453476
Identifier: 126453476
GI number: 126453476
Start: 1558361
End: 1559194
Strand: Direct
Name: 126453476
Synonym: BURPS1106A_1607
Alternate gene names: NA
Gene position: 1558361-1559194 (Clockwise)
Preceding gene: 126454317
Following gene: 126452772
Centisome position: 39.07
GC content: 70.86
Gene sequence:
>834_bases ATGGCGACCGAGCGCTTCGACTGGATCGACCCGTACCCGGCGCGGACGCTGCCGCGTCTGCGGCAGGTGCTCGACGCGCC GTTGACGCATGGGCGCTGGTATGCGCTCGTCGACATGGGTTTCTCGCCGACGCTGCGTGAAGCGCTCGCGGCGCTGAATC CGGACGGCGCGGTGATTGCGCTCTACGAAGGCGTATACGACGGCGACGGGCTGCTCGAGATTTCGCCGTGCGTGACGCCA TTGCCCGACGACGCGGCGCATCGGGCCGAAGTGTGCGCCGGCCTGCTGCGCGAGACCGACGGGCGACCGATGCTGAGCGT GCTGCGCGCGGCACATGGCCTCGACGCGCTCGTCGCGCATTTGCGCGGGCAGATGGAGGCGCGCGCCGCCGACGACGAGG CATTCCTCGTGCGGCTCGCGGATACGCGCTGCGTGCCGACGTGGGCGGGCGTGCTGACGCCCGCGCAGCGTGCGCGCTTT TTTGCGGGTATCGATGCGTGGTGGCTGTTCGATCGCGCGGCTTCGCTTGTCGAGCTCGATGTCGCGCCCGCGGGCAGCGA GACCGCGACGGGGGCCGACGACGGCGAGCCGTATCGCCTCGACGGCGAGCAGATTGCCGCGCTCAGGCACGCGTCGAAGA TCGACACGCTGCTTTTTCACGTGCGCCAGCGGCCGGAAAGCTTCGGACGATTGACGGCGACGCCCTCGCAGGCCTACGCG TGCGTAAGCGAAGCGTGGGCGAAGGAGGACGTGCCGCCGTCGGCGGGCGCGCGGCAGGCGCTCGATGCGCTCGAGGCGGC GGGATGGCTCGTGCCGGCCGAAGTGTCGGCTTAG
Upstream 100 bases:
>100_bases TGGCTCCCGCGCTGCCGCAGTTTCCCGAGAAGGTGTGCGTCGAATGCCTGAAGCACGCGATGCAATCGGGCAGCGCACTG GCCGGCAAGGCGATCTGAGC
Downstream 100 bases:
>100_bases GCGGGGCGGGCGGAACATGACGTGCGGCGAAAGGTGGGGAGGGCGTGGGACAGTGCCGTCGTCCATGCGATCACGGATTC CGCGCTTGACGTCGGCAGTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 277; Mature: 276
Protein sequence:
>277_residues MATERFDWIDPYPARTLPRLRQVLDAPLTHGRWYALVDMGFSPTLREALAALNPDGAVIALYEGVYDGDGLLEISPCVTP LPDDAAHRAEVCAGLLRETDGRPMLSVLRAAHGLDALVAHLRGQMEARAADDEAFLVRLADTRCVPTWAGVLTPAQRARF FAGIDAWWLFDRAASLVELDVAPAGSETATGADDGEPYRLDGEQIAALRHASKIDTLLFHVRQRPESFGRLTATPSQAYA CVSEAWAKEDVPPSAGARQALDALEAAGWLVPAEVSA
Sequences:
>Translated_277_residues MATERFDWIDPYPARTLPRLRQVLDAPLTHGRWYALVDMGFSPTLREALAALNPDGAVIALYEGVYDGDGLLEISPCVTP LPDDAAHRAEVCAGLLRETDGRPMLSVLRAAHGLDALVAHLRGQMEARAADDEAFLVRLADTRCVPTWAGVLTPAQRARF FAGIDAWWLFDRAASLVELDVAPAGSETATGADDGEPYRLDGEQIAALRHASKIDTLLFHVRQRPESFGRLTATPSQAYA CVSEAWAKEDVPPSAGARQALDALEAAGWLVPAEVSA >Mature_276_residues ATERFDWIDPYPARTLPRLRQVLDAPLTHGRWYALVDMGFSPTLREALAALNPDGAVIALYEGVYDGDGLLEISPCVTPL PDDAAHRAEVCAGLLRETDGRPMLSVLRAAHGLDALVAHLRGQMEARAADDEAFLVRLADTRCVPTWAGVLTPAQRARFF AGIDAWWLFDRAASLVELDVAPAGSETATGADDGEPYRLDGEQIAALRHASKIDTLLFHVRQRPESFGRLTATPSQAYAC VSEAWAKEDVPPSAGARQALDALEAAGWLVPAEVSA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29923; Mature: 29792
Theoretical pI: Translated: 4.53; Mature: 4.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATERFDWIDPYPARTLPRLRQVLDAPLTHGRWYALVDMGFSPTLREALAALNPDGAVIA CCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHCCCCCCEEE LYEGVYDGDGLLEISPCVTPLPDDAAHRAEVCAGLLRETDGRPMLSVLRAAHGLDALVAH EECCEECCCCEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHH LRGQMEARAADDEAFLVRLADTRCVPTWAGVLTPAQRARFFAGIDAWWLFDRAASLVELD HHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHCHHHHHHHHHCCHHHHHHHHHHHHEEEE VAPAGSETATGADDGEPYRLDGEQIAALRHASKIDTLLFHVRQRPESFGRLTATPSQAYA CCCCCCCCCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHCHHHHCCEECCHHHHHH CVSEAWAKEDVPPSAGARQALDALEAAGWLVPAEVSA HHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure ATERFDWIDPYPARTLPRLRQVLDAPLTHGRWYALVDMGFSPTLREALAALNPDGAVIA CCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHCCCCCCEEE LYEGVYDGDGLLEISPCVTPLPDDAAHRAEVCAGLLRETDGRPMLSVLRAAHGLDALVAH EECCEECCCCEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHH LRGQMEARAADDEAFLVRLADTRCVPTWAGVLTPAQRARFFAGIDAWWLFDRAASLVELD HHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHCHHHHHHHHHCCHHHHHHHHHHHHEEEE VAPAGSETATGADDGEPYRLDGEQIAALRHASKIDTLLFHVRQRPESFGRLTATPSQAYA CCCCCCCCCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHCHHHHCCEECCHHHHHH CVSEAWAKEDVPPSAGARQALDALEAAGWLVPAEVSA HHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA