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The map label for this gene is oxaA [H]

Identifier: 126453447

GI number: 126453447

Start: 104217

End: 105893

Strand: Direct

Name: oxaA [H]

Synonym: BURPS1106A_0107

Alternate gene names: 126453447

Gene position: 104217-105893 (Clockwise)

Preceding gene: 126452931

Following gene: 126452170

Centisome position: 2.61

GC content: 64.16

Gene sequence:

>1677_bases
ATGGATATCAAACGCACCGTCCTATGGGTGATCTTCTTCATGTCAGCGGTCATGCTGTTCGACAACTGGCAACGGTCCCA
CGGACGCCCGTCGATGTTCTTCCCGAACGTCACGCAGACGAACACCGCGTCGAACGCGACTAACGGCAATGGCGCGTCGG
GCGCGAGCGCGGCGGCGGCGGCGAATGCGCTGCCGGCGGCCGCGACGGGCGCGGCCCCCGCGACGACCGCGCCTGCGGCG
CAGGCGCAGCTCGTGCGCTTCTCGACCGACGTCTACAATGGCGAGATCGACACGCGCGGCGGCACGCTCGCGAAACTGAC
GCTGACGAAGGCGGGCGACGGCAAGCAGCCCGACCTGTCGGTGACGCTGTTCGATCACACGGCGAACCACACGTATCTCG
CGCGCACGGGCCTGCTCGGCGGCGATTTCCCGAATCACAACGACGTCTATGCGCAAGTGGCCGGCCCGACGTCGCTCGCG
GCCGACCAGAACACGCTGAAGCTGTCGTTCGAATCGCCGGTGAAGGGCGGCGTGAAGGTGGTGAAGACGTACACGTTCAC
GCGCGGCAGCTACGTGATCGGCGTCGACACGAAGATCGAGAACGTCGGCGCCGCGCCCGTGACGCCGAGCGTATACATGG
AGCTCGTGCGCGACAACTCGTCGGTCGAGACGCCGATGTTCTCGCATACGTTCCTCGGGCCGGCGGTGTACACGGATCAG
AAGCACTTCCAGAAGATCACGTTCGGCGACATCGACAAGAACAAGGCCGATTACGTCACGTCCGCCGACAACGGCTGGAT
CGCGATGGTTCAGCACTACTTCGCGTCCGCCTGGATTCCACAATCGGGCGCGAAGCGCGACATCTACGTCGAGAAGATCG
ACCCGACGCTGTACCGCGTCGGCGTGAAGCAGCCGGTCGCGGCGATCGCGCCGGGCCAGTCGGCCGACGTGTCCGCGCGC
CTGTTCGCCGGCCCGGAGGAAGAGCGGATGCTCGAAGGCATCGCGCCGGGCCTGGAGCTCGTGAAGGATTACGGCTGGGT
GACGATCATCGCGAAGCCGTTGTTCTGGCTGCTCGAGAAGATTCACGGCTTCGTCGGCAATTGGGGCTGGGCGATCGTGC
TGCTCACGCTGCTGATCAAGGCGGTGTTCTTCCCGCTGTCGGCGGCGAGCTACAAGTCGATGGCGCGGATGAAGGAAATC
ACGCCGCGGATGCAGGCGCTGCGCGAACGCTTCAAGAGCGATCCGCAGAAGATGAACGCGGCGCTGATGGAACTGTACAA
GACGGAGAAGGTGAACCCGTTCGGCGGCTGCCTGCCGGTGGTGATCCAGATTCCGGTGTTCATCTCGTTGTACTGGGTGC
TGCTCGCGTCGGTCGAAATGCGCGGCGCGCCGTGGGTTCTGTGGATTCACGACCTGTCGCAGCGCGACCCATACTTCATC
CTGCCGGTGCTGATGGCCGTCTCGATGTTCGTGCAGACGAAGCTGAACCCGACTCCCCCGGACCCGGTTCAGGCGAAGAT
GATGATGTTCATGCCGATCGCGTTCTCGGTGATGTTCTTCTTCTTCCCGGCCGGCCTCGTGCTGTACTACGTGGTGAACA
ACGTGCTGTCGATCGCGCAGCAGTACTACATCACGCGCACGCTCGGCGGCGCCGCGGCGAAGAAAAAGGCGAGCTGA

Upstream 100 bases:

>100_bases
TCTCCGCGGGCGGCGTCGACCTCGTCCCGCCGCCCAACTCCGACGCACGTAACGCTCCTCACGAAGCTGAGGCGTCGTCC
CATCGACTCTGAGACAACGC

Downstream 100 bases:

>100_bases
CGCCTTCGCCTGACGAAAAAGGGCGGCGCAAGCCGACCTTTTTTGAGCCGCTCCGGTGAACCGGGCATGATCGCCGGACA
TCATTTCGGCTGAAAGAATG

Product: putative inner membrane protein translocase component YidC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 558; Mature: 558

Protein sequence:

>558_residues
MDIKRTVLWVIFFMSAVMLFDNWQRSHGRPSMFFPNVTQTNTASNATNGNGASGASAAAAANALPAAATGAAPATTAPAA
QAQLVRFSTDVYNGEIDTRGGTLAKLTLTKAGDGKQPDLSVTLFDHTANHTYLARTGLLGGDFPNHNDVYAQVAGPTSLA
ADQNTLKLSFESPVKGGVKVVKTYTFTRGSYVIGVDTKIENVGAAPVTPSVYMELVRDNSSVETPMFSHTFLGPAVYTDQ
KHFQKITFGDIDKNKADYVTSADNGWIAMVQHYFASAWIPQSGAKRDIYVEKIDPTLYRVGVKQPVAAIAPGQSADVSAR
LFAGPEEERMLEGIAPGLELVKDYGWVTIIAKPLFWLLEKIHGFVGNWGWAIVLLTLLIKAVFFPLSAASYKSMARMKEI
TPRMQALRERFKSDPQKMNAALMELYKTEKVNPFGGCLPVVIQIPVFISLYWVLLASVEMRGAPWVLWIHDLSQRDPYFI
LPVLMAVSMFVQTKLNPTPPDPVQAKMMMFMPIAFSVMFFFFPAGLVLYYVVNNVLSIAQQYYITRTLGGAAAKKKAS

Sequences:

>Translated_558_residues
MDIKRTVLWVIFFMSAVMLFDNWQRSHGRPSMFFPNVTQTNTASNATNGNGASGASAAAAANALPAAATGAAPATTAPAA
QAQLVRFSTDVYNGEIDTRGGTLAKLTLTKAGDGKQPDLSVTLFDHTANHTYLARTGLLGGDFPNHNDVYAQVAGPTSLA
ADQNTLKLSFESPVKGGVKVVKTYTFTRGSYVIGVDTKIENVGAAPVTPSVYMELVRDNSSVETPMFSHTFLGPAVYTDQ
KHFQKITFGDIDKNKADYVTSADNGWIAMVQHYFASAWIPQSGAKRDIYVEKIDPTLYRVGVKQPVAAIAPGQSADVSAR
LFAGPEEERMLEGIAPGLELVKDYGWVTIIAKPLFWLLEKIHGFVGNWGWAIVLLTLLIKAVFFPLSAASYKSMARMKEI
TPRMQALRERFKSDPQKMNAALMELYKTEKVNPFGGCLPVVIQIPVFISLYWVLLASVEMRGAPWVLWIHDLSQRDPYFI
LPVLMAVSMFVQTKLNPTPPDPVQAKMMMFMPIAFSVMFFFFPAGLVLYYVVNNVLSIAQQYYITRTLGGAAAKKKAS
>Mature_558_residues
MDIKRTVLWVIFFMSAVMLFDNWQRSHGRPSMFFPNVTQTNTASNATNGNGASGASAAAAANALPAAATGAAPATTAPAA
QAQLVRFSTDVYNGEIDTRGGTLAKLTLTKAGDGKQPDLSVTLFDHTANHTYLARTGLLGGDFPNHNDVYAQVAGPTSLA
ADQNTLKLSFESPVKGGVKVVKTYTFTRGSYVIGVDTKIENVGAAPVTPSVYMELVRDNSSVETPMFSHTFLGPAVYTDQ
KHFQKITFGDIDKNKADYVTSADNGWIAMVQHYFASAWIPQSGAKRDIYVEKIDPTLYRVGVKQPVAAIAPGQSADVSAR
LFAGPEEERMLEGIAPGLELVKDYGWVTIIAKPLFWLLEKIHGFVGNWGWAIVLLTLLIKAVFFPLSAASYKSMARMKEI
TPRMQALRERFKSDPQKMNAALMELYKTEKVNPFGGCLPVVIQIPVFISLYWVLLASVEMRGAPWVLWIHDLSQRDPYFI
LPVLMAVSMFVQTKLNPTPPDPVQAKMMMFMPIAFSVMFFFFPAGLVLYYVVNNVLSIAQQYYITRTLGGAAAKKKAS

Specific function: Required for the insertion of integral membrane proteins into the membrane. Probably plays an essential role in the integration of proteins of the respiratory chain complexes. Involved in integration of membrane proteins that insert dependently and indepe

COG id: COG0706

COG function: function code U; Preprotein translocase subunit YidC

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the OXA1/oxaA family. Type 1 subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790140, Length=510, Percent_Identity=38.6274509803922, Blast_Score=375, Evalue=1e-105,
Organism=Drosophila melanogaster, GI24662345, Length=191, Percent_Identity=25.6544502617801, Blast_Score=68, Evalue=2e-11,
Organism=Drosophila melanogaster, GI21356443, Length=191, Percent_Identity=25.6544502617801, Blast_Score=68, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019998
- InterPro:   IPR001708 [H]

Pfam domain/function: PF02096 60KD_IMP [H]

EC number: NA

Molecular weight: Translated: 61133; Mature: 61133

Theoretical pI: Translated: 9.56; Mature: 9.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDIKRTVLWVIFFMSAVMLFDNWQRSHGRPSMFFPNVTQTNTASNATNGNGASGASAAAA
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
ANALPAAATGAAPATTAPAAQAQLVRFSTDVYNGEIDTRGGTLAKLTLTKAGDGKQPDLS
HHCCCCCCCCCCCCCCCCHHHHHHHEEEHHHCCCEEECCCCEEEEEEEEECCCCCCCCEE
VTLFDHTANHTYLARTGLLGGDFPNHNDVYAQVAGPTSLAADQNTLKLSFESPVKGGVKV
EEEEECCCCCEEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCCEEEEEECCCCCCCEEE
VKTYTFTRGSYVIGVDTKIENVGAAPVTPSVYMELVRDNSSVETPMFSHTFLGPAVYTDQ
EEEEEEECCCEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHCCCCEECCH
KHFQKITFGDIDKNKADYVTSADNGWIAMVQHYFASAWIPQSGAKRDIYVEKIDPTLYRV
HHHHCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEECCCHHEEC
GVKQPVAAIAPGQSADVSARLFAGPEEERMLEGIAPGLELVKDYGWVTIIAKPLFWLLEK
CCCCCHHHCCCCCCCCCCEEEECCCCHHHHHHHHCHHHHHHHHCCEEEEHHHHHHHHHHH
IHGFVGNWGWAIVLLTLLIKAVFFPLSAASYKSMARMKEITPRMQALRERFKSDPQKMNA
HHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
ALMELYKTEKVNPFGGCLPVVIQIPVFISLYWVLLASVEMRGAPWVLWIHDLSQRDPYFI
HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCEEH
LPVLMAVSMFVQTKLNPTPPDPVQAKMMMFMPIAFSVMFFFFPAGLVLYYVVNNVLSIAQ
HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QYYITRTLGGAAAKKKAS
HHHHHHHHCCHHHHCCCC
>Mature Secondary Structure
MDIKRTVLWVIFFMSAVMLFDNWQRSHGRPSMFFPNVTQTNTASNATNGNGASGASAAAA
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
ANALPAAATGAAPATTAPAAQAQLVRFSTDVYNGEIDTRGGTLAKLTLTKAGDGKQPDLS
HHCCCCCCCCCCCCCCCCHHHHHHHEEEHHHCCCEEECCCCEEEEEEEEECCCCCCCCEE
VTLFDHTANHTYLARTGLLGGDFPNHNDVYAQVAGPTSLAADQNTLKLSFESPVKGGVKV
EEEEECCCCCEEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCCEEEEEECCCCCCCEEE
VKTYTFTRGSYVIGVDTKIENVGAAPVTPSVYMELVRDNSSVETPMFSHTFLGPAVYTDQ
EEEEEEECCCEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHCCCCEECCH
KHFQKITFGDIDKNKADYVTSADNGWIAMVQHYFASAWIPQSGAKRDIYVEKIDPTLYRV
HHHHCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEECCCHHEEC
GVKQPVAAIAPGQSADVSARLFAGPEEERMLEGIAPGLELVKDYGWVTIIAKPLFWLLEK
CCCCCHHHCCCCCCCCCCEEEECCCCHHHHHHHHCHHHHHHHHCCEEEEHHHHHHHHHHH
IHGFVGNWGWAIVLLTLLIKAVFFPLSAASYKSMARMKEITPRMQALRERFKSDPQKMNA
HHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
ALMELYKTEKVNPFGGCLPVVIQIPVFISLYWVLLASVEMRGAPWVLWIHDLSQRDPYFI
HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCEEH
LPVLMAVSMFVQTKLNPTPPDPVQAKMMMFMPIAFSVMFFFFPAGLVLYYVVNNVLSIAQ
HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QYYITRTLGGAAAKKKAS
HHHHHHHHCCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA