| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is 126453388
Identifier: 126453388
GI number: 126453388
Start: 3311145
End: 3311651
Strand: Reverse
Name: 126453388
Synonym: BURPS1106A_3393
Alternate gene names: NA
Gene position: 3311651-3311145 (Counterclockwise)
Preceding gene: 126454035
Following gene: 126453474
Centisome position: 83.03
GC content: 68.64
Gene sequence:
>507_bases ATGCGGACGCGGCGCGGTGCGGCAGTGCGATGCGGCGCGCGCCGCGATTCGGGACCGCGGCTGCATCCGGGCGCGCGGCC CGCGCGCAAAGGCGTGCTCGCGGTGGCAACCGCACGCTGCCGCTCGCACGGCGGGCGGCAGGCTTCTACCGATGCGAGAC GGGGCGGTGCGGGGCGAAATGTGCAGCCGAACCGCGCGCTTCATTCCCGCGTTTATCCGCGTGCCCGATTCTCGAGTGCT CGATCCAAGCGCCGCTTTGCATGCCCGATTCGCATGCCCGATTCGCGCGGCTCGGCGACGAGCGCCTCGATCGCACGGCG CGAAACGAAACGGGAAACCGCGCGGCAATCGCCGCTGTTTCGTCCGCGTCGCGTGCCCCGCGCGGCCGACGCGATTGTTG CAAACCATCCACAGGCCGGACGGCCGATTATCAACGAATGCGCAACGGCCGGTTATGATCGGCGACAACGTATACTCTCG GGCGGATTCCCGACAGAAGACAGATGA
Upstream 100 bases:
>100_bases GGCGGTAGACGTCGAGGGCGAGGGCGGGTTCGGTCGGCTGATTCATCACGCGATTGTAGCGCCGTCGCGCGGGGCGCGCG CGACGGATGGCGCGCCGCTC
Downstream 100 bases:
>100_bases TGAAATTAATCGGTTCGCTCAGCAGCCCGTTCGTCCGCAAGGCGCGGATCGTGCTCGCTGAAAAGAAGATCGACTACAAG CTGGAGCTCGAAAACGTCTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 168; Mature: 168
Protein sequence:
>168_residues MRTRRGAAVRCGARRDSGPRLHPGARPARKGVLAVATARCRSHGGRQASTDARRGGAGRNVQPNRALHSRVYPRARFSSA RSKRRFACPIRMPDSRGSATSASIARRETKRETARQSPLFRPRRVPRAADAIVANHPQAGRPIINECATAGYDRRQRILS GGFPTEDR
Sequences:
>Translated_168_residues MRTRRGAAVRCGARRDSGPRLHPGARPARKGVLAVATARCRSHGGRQASTDARRGGAGRNVQPNRALHSRVYPRARFSSA RSKRRFACPIRMPDSRGSATSASIARRETKRETARQSPLFRPRRVPRAADAIVANHPQAGRPIINECATAGYDRRQRILS GGFPTEDR >Mature_168_residues MRTRRGAAVRCGARRDSGPRLHPGARPARKGVLAVATARCRSHGGRQASTDARRGGAGRNVQPNRALHSRVYPRARFSSA RSKRRFACPIRMPDSRGSATSASIARRETKRETARQSPLFRPRRVPRAADAIVANHPQAGRPIINECATAGYDRRQRILS GGFPTEDR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18470; Mature: 18470
Theoretical pI: Translated: 12.57; Mature: 12.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTRRGAAVRCGARRDSGPRLHPGARPARKGVLAVATARCRSHGGRQASTDARRGGAGRN CCCCCCCEEEECCCCCCCCCCCCCCCHHHHCHHHHHHHHHHHCCCCCCCCHHHCCCCCCC VQPNRALHSRVYPRARFSSARSKRRFACPIRMPDSRGSATSASIARRETKRETARQSPLF CCCCHHHHHHCCCHHHHHHHHHCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC RPRRVPRAADAIVANHPQAGRPIINECATAGYDRRQRILSGGFPTEDR CCCCCCHHHHHHHHCCCCCCCHHHHHHHHCCHHHHHHHHHCCCCCCCC >Mature Secondary Structure MRTRRGAAVRCGARRDSGPRLHPGARPARKGVLAVATARCRSHGGRQASTDARRGGAGRN CCCCCCCEEEECCCCCCCCCCCCCCCHHHHCHHHHHHHHHHHCCCCCCCCHHHCCCCCCC VQPNRALHSRVYPRARFSSARSKRRFACPIRMPDSRGSATSASIARRETKRETARQSPLF CCCCHHHHHHCCCHHHHHHHHHCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC RPRRVPRAADAIVANHPQAGRPIINECATAGYDRRQRILSGGFPTEDR CCCCCCHHHHHHHHCCCCCCCHHHHHHHHCCHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA