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The map label for this gene is pld [H]

Identifier: 126453373

GI number: 126453373

Start: 2348372

End: 2348995

Strand: Direct

Name: pld [H]

Synonym: BURPS1106A_2376

Alternate gene names: 126453373

Gene position: 2348372-2348995 (Clockwise)

Preceding gene: 126454301

Following gene: 126453628

Centisome position: 58.88

GC content: 66.19

Gene sequence:

>624_bases
ATGCAGTTGCCGAAGCGGTTCGCCGCCGCATGTCTCGCCGCCGCTTTCCTGTGCGGCGCCCCGCCCGCCGTCAGCAAGAC
GACCTCCGAATCACTGCTCGAGCGCCTCGTCGCGCTGATCGCCGACGCACTGCCGTCATCCGCGAAGCAAGCGCCGGCGG
GCCAGGTCGTCGAGGCCGCGTTCTCGCCGGACGGCGGCGCCGAAGCACTCGTGTTGAAAGTGATCGGCACGTCGCGCGCG
TCGCTGCGCCTCGCCGGCTATTCGTTCACGTCGCCGAAGGTCGTGCGCGCGCTGCTCGACGCACATCGGCGCGGTGTCGA
CGTCGCGATCGTCGTCGACAACGACGGCAATCGCTCGAAGGCGTCGAAGCAGGCGCTCAATCTGCTCGTCAACGCGAAAG
TACCGACGCGCACGATCGATCGCTACGCGATCCACCATGACAAGTACATCGTCGTCGACGGCCGCCACGTGGAGACGGGG
TCGTTCAACTACAGCGCCGCCGCGGCCGCGCGCAATTCGGAAAACGTGCTCGTCGTCTGGAACAACCCTGCGCTCGCCGC
GCAATACCTGAAGCACTGGCAGAACCGGTTCGATCAAGGAACCGCCTATCGGTCGGCTTATTGA

Upstream 100 bases:

>100_bases
CGGCGATGCGCGTCGACAGGAACTTTCCGGAGAATCGACGAAAACCACGCCGATGCCGTTACACTCTCGTCCTCCTCAGT
TTCGAACGTCCGCCCCTCTC

Downstream 100 bases:

>100_bases
CCGGCGAGCGGCTGGCGCGCACCGCTTGGCGCGTCAACTCGACGACGAGCGCAGCCTTCGCTGCGGACGCGCTCGAGCAG
CCTTTCGCGCTCGCCGGTCC

Product: endonuclease Nuc

Products: NA

Alternate protein names: PLD; Choline phosphatase [H]

Number of amino acids: Translated: 207; Mature: 207

Protein sequence:

>207_residues
MQLPKRFAAACLAAAFLCGAPPAVSKTTSESLLERLVALIADALPSSAKQAPAGQVVEAAFSPDGGAEALVLKVIGTSRA
SLRLAGYSFTSPKVVRALLDAHRRGVDVAIVVDNDGNRSKASKQALNLLVNAKVPTRTIDRYAIHHDKYIVVDGRHVETG
SFNYSAAAAARNSENVLVVWNNPALAAQYLKHWQNRFDQGTAYRSAY

Sequences:

>Translated_207_residues
MQLPKRFAAACLAAAFLCGAPPAVSKTTSESLLERLVALIADALPSSAKQAPAGQVVEAAFSPDGGAEALVLKVIGTSRA
SLRLAGYSFTSPKVVRALLDAHRRGVDVAIVVDNDGNRSKASKQALNLLVNAKVPTRTIDRYAIHHDKYIVVDGRHVETG
SFNYSAAAAARNSENVLVVWNNPALAAQYLKHWQNRFDQGTAYRSAY
>Mature_207_residues
MQLPKRFAAACLAAAFLCGAPPAVSKTTSESLLERLVALIADALPSSAKQAPAGQVVEAAFSPDGGAEALVLKVIGTSRA
SLRLAGYSFTSPKVVRALLDAHRRGVDVAIVVDNDGNRSKASKQALNLLVNAKVPTRTIDRYAIHHDKYIVVDGRHVETG
SFNYSAAAAARNSENVLVVWNNPALAAQYLKHWQNRFDQGTAYRSAY

Specific function: Could be a virulence factor [H]

COG id: COG1502

COG function: function code I; Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes

Gene ontology:

Cell location: Secreted (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PLD phosphodiesterase domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001736 [H]

Pfam domain/function: NA

EC number: =3.1.4.4 [H]

Molecular weight: Translated: 22129; Mature: 22129

Theoretical pI: Translated: 10.08; Mature: 10.08

Prosite motif: PS50035 PLD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLPKRFAAACLAAAFLCGAPPAVSKTTSESLLERLVALIADALPSSAKQAPAGQVVEAA
CCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHEE
FSPDGGAEALVLKVIGTSRASLRLAGYSFTSPKVVRALLDAHRRGVDVAIVVDNDGNRSK
CCCCCCCCEEEEEEECCCCCEEEEECCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCHHH
ASKQALNLLVNAKVPTRTIDRYAIHHDKYIVVDGRHVETGSFNYSAAAAARNSENVLVVW
HHHHHHHHHEECCCCCHHHHHHEEECCCEEEEECCEEECCCCCCHHHHHCCCCCCEEEEE
NNPALAAQYLKHWQNRFDQGTAYRSAY
CCCHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MQLPKRFAAACLAAAFLCGAPPAVSKTTSESLLERLVALIADALPSSAKQAPAGQVVEAA
CCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHEE
FSPDGGAEALVLKVIGTSRASLRLAGYSFTSPKVVRALLDAHRRGVDVAIVVDNDGNRSK
CCCCCCCCEEEEEEECCCCCEEEEECCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCHHH
ASKQALNLLVNAKVPTRTIDRYAIHHDKYIVVDGRHVETGSFNYSAAAAARNSENVLVVW
HHHHHHHHHEECCCCCHHHHHHEEECCCEEEEECCEEECCCCCCHHHHHCCCCCCEEEEE
NNPALAAQYLKHWQNRFDQGTAYRSAY
CCCHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA