| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is cysC [H]
Identifier: 126453354
GI number: 126453354
Start: 2038389
End: 2039156
Strand: Reverse
Name: cysC [H]
Synonym: BURPS1106A_2056
Alternate gene names: 126453354
Gene position: 2039156-2038389 (Counterclockwise)
Preceding gene: 126451445
Following gene: 126454435
Centisome position: 51.13
GC content: 61.07
Gene sequence:
>768_bases ATGACCTCGATGTCGCTCCTCGCTGCCGTTTATAGCGGCCGTCGCGAGGTGTCGATTGACGGATGCCATGAGGTGCAAAA CATTGCCGTTGCCGCGGCGCTTGACGGCGGTCAAGCGCCGCCATCGGCGCACGGCGCCGTGCAATTCACTGACAGGAAGC TTATGGACAAGTTACATGCGGAGCACAACGTCGAATGGCAGACGACGTCCGTCAGTCGGCGTGATCGTGAGTCGCGGCAG GCGCACGGCGCGCTTGCAGTCTGGCTAACGGGCCTTCCCGGAGCTGGAAAGTCGACACTGGCGATCGAGGCGGAACGATG CCTCCATCAAGCCGGGAAGCGGACTTATGTTCTGGATGGTGACAATCTTCGGCACGGACTGTGTCGCGACCTGGGATTCT CCGCGGACGATCGCGCGGAAAACATTCGCCGCGCGGGCGAAGTGGCGCGACTGTTCGTCGACGCTGGCGTCATTGTGCTG TCGGCCTTCATTTCTCCATTCCGATTCGATCGTGCGAAGGTTCGTGCACTGTTCGACGCGGGCGACTTCATCGAAGTGTA CTGCGACTGCGATCCGCGGATTTGCGAAATCCGGGACGTCAAAGGCTTGTACAGAAGGGCGCGTGCGGGGCTGATTTCCG AGTTCACCGGCATCTCCTCTCCTTACGAGCCGCCGCGGCATCCTGACGTCTACGTCAATACTGGCAAGGAATCGCTGGAT GCATGCGTCGACAGGATCGTCCGCCGCGTGCTCCATTCGCTGCGCTAG
Upstream 100 bases:
>100_bases GCGCCGACGCTTCGGATTGTGGTTCGGGCCGCCCTAGTGACTGCCCTGCCTGGTTTTCGACTTCGGCGCGGTGACATCCA TCAAATTGAGGATGACGGGC
Downstream 100 bases:
>100_bases TTATGATTAAGTTAGCTAAGCTGATGTGGCCGGGAGATCTGAGGAAGGCCACTTTGCAGCCGGTCCAGGATGAACAGCGT GTGGCTCGATGCGGCCAATC
Product: adenylylsulfate kinase
Products: NA
Alternate protein names: APS kinase; ATP adenosine-5'-phosphosulfate 3'-phosphotransferase; Adenosine-5'-phosphosulfate kinase [H]
Number of amino acids: Translated: 255; Mature: 254
Protein sequence:
>255_residues MTSMSLLAAVYSGRREVSIDGCHEVQNIAVAAALDGGQAPPSAHGAVQFTDRKLMDKLHAEHNVEWQTTSVSRRDRESRQ AHGALAVWLTGLPGAGKSTLAIEAERCLHQAGKRTYVLDGDNLRHGLCRDLGFSADDRAENIRRAGEVARLFVDAGVIVL SAFISPFRFDRAKVRALFDAGDFIEVYCDCDPRICEIRDVKGLYRRARAGLISEFTGISSPYEPPRHPDVYVNTGKESLD ACVDRIVRRVLHSLR
Sequences:
>Translated_255_residues MTSMSLLAAVYSGRREVSIDGCHEVQNIAVAAALDGGQAPPSAHGAVQFTDRKLMDKLHAEHNVEWQTTSVSRRDRESRQ AHGALAVWLTGLPGAGKSTLAIEAERCLHQAGKRTYVLDGDNLRHGLCRDLGFSADDRAENIRRAGEVARLFVDAGVIVL SAFISPFRFDRAKVRALFDAGDFIEVYCDCDPRICEIRDVKGLYRRARAGLISEFTGISSPYEPPRHPDVYVNTGKESLD ACVDRIVRRVLHSLR >Mature_254_residues TSMSLLAAVYSGRREVSIDGCHEVQNIAVAAALDGGQAPPSAHGAVQFTDRKLMDKLHAEHNVEWQTTSVSRRDRESRQA HGALAVWLTGLPGAGKSTLAIEAERCLHQAGKRTYVLDGDNLRHGLCRDLGFSADDRAENIRRAGEVARLFVDAGVIVLS AFISPFRFDRAKVRALFDAGDFIEVYCDCDPRICEIRDVKGLYRRARAGLISEFTGISSPYEPPRHPDVYVNTGKESLDA CVDRIVRRVLHSLR
Specific function: Catalyzes the synthesis of activated sulfate [H]
COG id: COG0529
COG function: function code P; Adenylylsulfate kinase and related kinases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the APS kinase family [H]
Homologues:
Organism=Homo sapiens, GI62912492, Length=191, Percent_Identity=47.6439790575916, Blast_Score=170, Evalue=1e-42, Organism=Homo sapiens, GI34447231, Length=191, Percent_Identity=47.6439790575916, Blast_Score=170, Evalue=1e-42, Organism=Homo sapiens, GI46094058, Length=191, Percent_Identity=45.5497382198953, Blast_Score=168, Evalue=5e-42, Organism=Escherichia coli, GI1789107, Length=198, Percent_Identity=50.5050505050505, Blast_Score=193, Evalue=1e-50, Organism=Caenorhabditis elegans, GI17542422, Length=191, Percent_Identity=45.5497382198953, Blast_Score=183, Evalue=9e-47, Organism=Saccharomyces cerevisiae, GI6322852, Length=191, Percent_Identity=43.455497382199, Blast_Score=170, Evalue=2e-43, Organism=Drosophila melanogaster, GI24667032, Length=196, Percent_Identity=44.8979591836735, Blast_Score=162, Evalue=2e-40, Organism=Drosophila melanogaster, GI24667028, Length=196, Percent_Identity=44.8979591836735, Blast_Score=162, Evalue=2e-40, Organism=Drosophila melanogaster, GI24667036, Length=196, Percent_Identity=44.8979591836735, Blast_Score=162, Evalue=2e-40, Organism=Drosophila melanogaster, GI24667040, Length=196, Percent_Identity=44.8979591836735, Blast_Score=162, Evalue=2e-40, Organism=Drosophila melanogaster, GI116007838, Length=196, Percent_Identity=44.8979591836735, Blast_Score=162, Evalue=2e-40, Organism=Drosophila melanogaster, GI24667044, Length=196, Percent_Identity=44.8979591836735, Blast_Score=162, Evalue=2e-40,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002891 [H]
Pfam domain/function: PF01583 APS_kinase [H]
EC number: =2.7.1.25 [H]
Molecular weight: Translated: 28159; Mature: 28028
Theoretical pI: Translated: 7.83; Mature: 7.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSMSLLAAVYSGRREVSIDGCHEVQNIAVAAALDGGQAPPSAHGAVQFTDRKLMDKLHA CCHHHHHHHHHCCCCEEECCCHHHHHHHEEEEEECCCCCCCCCCCCEEEHHHHHHHHHHH EHNVEWQTTSVSRRDRESRQAHGALAVWLTGLPGAGKSTLAIEAERCLHQAGKRTYVLDG HCCCCEEECCCHHHHHHHHHHCCEEEEEEECCCCCCCCEEEEHHHHHHHHCCCEEEEECC DNLRHGLCRDLGFSADDRAENIRRAGEVARLFVDAGVIVLSAFISPFRFDRAKVRALFDA CCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCC GDFIEVYCDCDPRICEIRDVKGLYRRARAGLISEFTGISSPYEPPRHPDVYVNTGKESLD CCEEEEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCHHHHH ACVDRIVRRVLHSLR HHHHHHHHHHHHHCC >Mature Secondary Structure TSMSLLAAVYSGRREVSIDGCHEVQNIAVAAALDGGQAPPSAHGAVQFTDRKLMDKLHA CHHHHHHHHHCCCCEEECCCHHHHHHHEEEEEECCCCCCCCCCCCEEEHHHHHHHHHHH EHNVEWQTTSVSRRDRESRQAHGALAVWLTGLPGAGKSTLAIEAERCLHQAGKRTYVLDG HCCCCEEECCCHHHHHHHHHHCCEEEEEEECCCCCCCCEEEEHHHHHHHHCCCEEEEECC DNLRHGLCRDLGFSADDRAENIRRAGEVARLFVDAGVIVLSAFISPFRFDRAKVRALFDA CCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCC GDFIEVYCDCDPRICEIRDVKGLYRRARAGLISEFTGISSPYEPPRHPDVYVNTGKESLD CCEEEEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCHHHHH ACVDRIVRRVLHSLR HHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12917486 [H]