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The map label for this gene is 126453341

Identifier: 126453341

GI number: 126453341

Start: 3565587

End: 3566933

Strand: Direct

Name: 126453341

Synonym: BURPS1106A_3664

Alternate gene names: NA

Gene position: 3565587-3566933 (Clockwise)

Preceding gene: 126455022

Following gene: 126452435

Centisome position: 89.4

GC content: 66.0

Gene sequence:

>1347_bases
ATGAGTTATTCGGCCAAGGTGCTCTGGGGAGAAGGCCTCTTTCTGAGGCCGCAGCACTTTCAGCGGCAGGACGCGTATCA
CGAAGCGCGCCTGTTCGAATCGATCCAGGCGATCCAGCCGTACAACTGGGGCGTGCGTTCGGTGCGGTTCGATCGCGACG
CGCTCGGCAGCAACGTGCTGCGCGCGAGCGAACTGTCGCTCGTGTTTCCGGACGGCGCGCTCTACTCCGCGCCGCAAGCC
GACGAACTGCCGCCGCCCATCGCGCTCGACACGCTGCCCGAAGGCATCAACGAATTCACGTTCTACCTCGCGCTGCACCC
GCTGCGCGAGACCGGCTCGAACTACGCGGACGACCGCGACGCCGGCTTCGTGTCGCGCTTCGTCAGCGAACAGGCGAGCG
TTGCCGATCACTTCACCGACGCCGCGGAAGCGGACATCACGTTCCTGAAGACGAACGTGAAGCTGATCGCGCACAGCGAG
CCGCGCGACCAGTTGCTGTCGATCCCGCTCGTACGCGTGCGCCGCACCGCGACGTCCGGCTTCGAGATCGACGACGGCTT
CGTGCCGCCGTGCCTCGCGATCGAGGCGTCGCCGATCCTGCATCAGCGCCTGCGCCAGTTGATCGACGCGCTGCAGGCGA
AGGTGAATGCACTGTACGGTTTCCATCGCGAGCCGACGAAGAACATCATCGAGTTCCGCTCGGGCGACATCGCATCGTTC
TGGCTGCTGCACACGGCGAGCGCCGCGTTCGCCGCGCTCGCGCACCTGCACCAGCATTCGGCCTTGCATCCGGAGCGGCT
GTTCCAGGAACTACTGCGCCTCGCGGGCCAGTTGATGACGTTCTCGAAGGGCTACGTGCTCGCCGATCTGCCCGCGTACC
GGCATGACGATCCGGGCCCGGGCTTCGCGCGGCTCGATTCGATCCTGCGCGAGCTGCTCGAGACCGTGATCTCGACGCGC
TACTTCGCGATCACGCTCGAGGAAGTGCGGCCGTCGTTCCATGTCGGGCGGCTCGACTCGGGCAAGATCGACGACAAGAC
CGCGTTCTATCTCGCGGTGTCGGCCGACATGCCGTCGGTCGAACTCGTCGATGCGGTGCCCGCGCGCTTCAAGGTGGGCG
CGCCGGACGACGTCGACAAGCTCGTGCTCTCCGCGATGCCGGGCGTGCGCCTCGCGTACACGCCGCAGGTGCCGCCCGCG
ATTCCCGTGCGCCCGGGCGCATGCTATTTCGCACTCGATGCGCGCAGCCCGCTCTATGAGCGGATGCTGCAGGCCCAGTC
GGCGATGATCTATGCGCCGTCCGGAATCAACGATCTCAAATTCGAACTGATCGCCGTCACGTCATGA

Upstream 100 bases:

>100_bases
ATGACGCCAGAAAGTCATTTGACAAAGATTAACGATTCGCTTGCCGAACGCGACGCGAATTAACCGACCAACGGCCCAAT
CACATTTAAGCGGATTTGAC

Downstream 100 bases:

>100_bases
GTTACGCGCCCTCCCTCTTCGGCGGCAACACGCCGCCCCCCGCGCCGCAAACGGCTTCGTCGACCGACGCCGGCTTCCAG
GCGCGCTCGCTCGTCGATCT

Product: hypothetical protein

Products: NA

Alternate protein names: Type VI Secretion Protein Family; Protein ImpJ/VasE; Conserved Protein; Replication/Virulence Associated Protein; Type VI Secretion System Protein EvpM; Protein ImpJ; Type VI Secretion System Protein; Type VI Secretion System Protein ImpJ; Type VI Secretion; Type VI Secretion System Core Protein; T6ss M; Type VI Secretion Protein VasE; Temperature-Dependent Protein Secretion ImpJ

Number of amino acids: Translated: 448; Mature: 447

Protein sequence:

>448_residues
MSYSAKVLWGEGLFLRPQHFQRQDAYHEARLFESIQAIQPYNWGVRSVRFDRDALGSNVLRASELSLVFPDGALYSAPQA
DELPPPIALDTLPEGINEFTFYLALHPLRETGSNYADDRDAGFVSRFVSEQASVADHFTDAAEADITFLKTNVKLIAHSE
PRDQLLSIPLVRVRRTATSGFEIDDGFVPPCLAIEASPILHQRLRQLIDALQAKVNALYGFHREPTKNIIEFRSGDIASF
WLLHTASAAFAALAHLHQHSALHPERLFQELLRLAGQLMTFSKGYVLADLPAYRHDDPGPGFARLDSILRELLETVISTR
YFAITLEEVRPSFHVGRLDSGKIDDKTAFYLAVSADMPSVELVDAVPARFKVGAPDDVDKLVLSAMPGVRLAYTPQVPPA
IPVRPGACYFALDARSPLYERMLQAQSAMIYAPSGINDLKFELIAVTS

Sequences:

>Translated_448_residues
MSYSAKVLWGEGLFLRPQHFQRQDAYHEARLFESIQAIQPYNWGVRSVRFDRDALGSNVLRASELSLVFPDGALYSAPQA
DELPPPIALDTLPEGINEFTFYLALHPLRETGSNYADDRDAGFVSRFVSEQASVADHFTDAAEADITFLKTNVKLIAHSE
PRDQLLSIPLVRVRRTATSGFEIDDGFVPPCLAIEASPILHQRLRQLIDALQAKVNALYGFHREPTKNIIEFRSGDIASF
WLLHTASAAFAALAHLHQHSALHPERLFQELLRLAGQLMTFSKGYVLADLPAYRHDDPGPGFARLDSILRELLETVISTR
YFAITLEEVRPSFHVGRLDSGKIDDKTAFYLAVSADMPSVELVDAVPARFKVGAPDDVDKLVLSAMPGVRLAYTPQVPPA
IPVRPGACYFALDARSPLYERMLQAQSAMIYAPSGINDLKFELIAVTS
>Mature_447_residues
SYSAKVLWGEGLFLRPQHFQRQDAYHEARLFESIQAIQPYNWGVRSVRFDRDALGSNVLRASELSLVFPDGALYSAPQAD
ELPPPIALDTLPEGINEFTFYLALHPLRETGSNYADDRDAGFVSRFVSEQASVADHFTDAAEADITFLKTNVKLIAHSEP
RDQLLSIPLVRVRRTATSGFEIDDGFVPPCLAIEASPILHQRLRQLIDALQAKVNALYGFHREPTKNIIEFRSGDIASFW
LLHTASAAFAALAHLHQHSALHPERLFQELLRLAGQLMTFSKGYVLADLPAYRHDDPGPGFARLDSILRELLETVISTRY
FAITLEEVRPSFHVGRLDSGKIDDKTAFYLAVSADMPSVELVDAVPARFKVGAPDDVDKLVLSAMPGVRLAYTPQVPPAI
PVRPGACYFALDARSPLYERMLQAQSAMIYAPSGINDLKFELIAVTS

Specific function: Unknown

COG id: COG3522

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49759; Mature: 49628

Theoretical pI: Translated: 5.73; Mature: 5.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYSAKVLWGEGLFLRPQHFQRQDAYHEARLFESIQAIQPYNWGVRSVRFDRDALGSNVL
CCCCCEEEECCCEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECHHHHCCCCE
RASELSLVFPDGALYSAPQADELPPPIALDTLPEGINEFTFYLALHPLRETGSNYADDRD
ECCCCEEECCCCCCCCCCCCCCCCCCCCHHHHHCCHHHHEEEEEEECHHHCCCCCCCCCH
AGFVSRFVSEQASVADHFTDAAEADITFLKTNVKLIAHSEPRDQLLSIPLVRVRRTATSG
HHHHHHHHHHHHHHHHHHCCHHHCCEEEEEECEEEEECCCCHHHHHHCCHHHHHHHCCCC
FEIDDGFVPPCLAIEASPILHQRLRQLIDALQAKVNALYGFHREPTKNIIEFRSGDIASF
CCCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCHHHH
WLLHTASAAFAALAHLHQHSALHPERLFQELLRLAGQLMTFSKGYVLADLPAYRHDDPGP
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCC
GFARLDSILRELLETVISTRYFAITLEEVRPSFHVGRLDSGKIDDKTAFYLAVSADMPSV
CHHHHHHHHHHHHHHHHCCEEEEEEHHHHCCCEEECCCCCCCCCCCEEEEEEEECCCCCC
ELVDAVPARFKVGAPDDVDKLVLSAMPGVRLAYTPQVPPAIPVRPGACYFALDARSPLYE
HHHHCCCCCEECCCCCHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCEEEEECCCCHHHH
RMLQAQSAMIYAPSGINDLKFELIAVTS
HHHHHCCCEEECCCCCCCCEEEEEEECC
>Mature Secondary Structure 
SYSAKVLWGEGLFLRPQHFQRQDAYHEARLFESIQAIQPYNWGVRSVRFDRDALGSNVL
CCCCEEEECCCEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECHHHHCCCCE
RASELSLVFPDGALYSAPQADELPPPIALDTLPEGINEFTFYLALHPLRETGSNYADDRD
ECCCCEEECCCCCCCCCCCCCCCCCCCCHHHHHCCHHHHEEEEEEECHHHCCCCCCCCCH
AGFVSRFVSEQASVADHFTDAAEADITFLKTNVKLIAHSEPRDQLLSIPLVRVRRTATSG
HHHHHHHHHHHHHHHHHHCCHHHCCEEEEEECEEEEECCCCHHHHHHCCHHHHHHHCCCC
FEIDDGFVPPCLAIEASPILHQRLRQLIDALQAKVNALYGFHREPTKNIIEFRSGDIASF
CCCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCHHHH
WLLHTASAAFAALAHLHQHSALHPERLFQELLRLAGQLMTFSKGYVLADLPAYRHDDPGP
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCC
GFARLDSILRELLETVISTRYFAITLEEVRPSFHVGRLDSGKIDDKTAFYLAVSADMPSV
CHHHHHHHHHHHHHHHHCCEEEEEEHHHHCCCEEECCCCCCCCCCCEEEEEEEECCCCCC
ELVDAVPARFKVGAPDDVDKLVLSAMPGVRLAYTPQVPPAIPVRPGACYFALDARSPLYE
HHHHCCCCCEECCCCCHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCEEEEECCCCHHHH
RMLQAQSAMIYAPSGINDLKFELIAVTS
HHHHHCCCEEECCCCCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA