| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is thiE [H]
Identifier: 126453292
GI number: 126453292
Start: 3646165
End: 3647268
Strand: Reverse
Name: thiE [H]
Synonym: BURPS1106A_3736
Alternate gene names: 126453292
Gene position: 3647268-3646165 (Counterclockwise)
Preceding gene: 126454305
Following gene: 126451478
Centisome position: 91.45
GC content: 74.64
Gene sequence:
>1104_bases ATGAGCGCCGCGTTGCCCGACGCGTTCTGGCCGCCCGCCGACGAGCTTACCGAGGCCGCCGAGCGGATTCGCGCGACGCT CGGTGCGTGGCCGCAGCCGGCCGTGCGCACGCGGATCTGTCTCGCGCCGCCCGAGCAGCCGCGCGCGGCCGACCTGTGGG TCGCCATCGCGGGCGACGCCGGCGCGCACGCCGCGCAGATCGCGCGGCTGAACGCGGCGGGCGCGCAGGCGATCGTCATC GACGATGCATCGGCGACGCTCCACACGGGCGCGGCGCGCCATGCGCTCGCGTCGCGCGCGCCGCTCGCCGACGACTGGAT CGCGGCGCTCGCGGCGTTTCTCGATTGCGGCTTCGCCGCGTCCGACGCACTCGTGCTCGCGCTCGCATGGCGCGACGGCG ACGAGGCGCGCGGCGGCGATCCGTGGCCCGTCGATCCGGCACGCTTTCCGCGCGTGCTCGGCCTGCCCGCCGCGCCCGAA CCGGCGTTCGCGCCGTGCCCGCAGCGGCTCGGCCTGTATCCGGTGCTGCCGAGTGCCGAATGGGTCGAGCGCGTGCTCGA TTGCGGCGTGCGGACCGTGCAACTGCGCGTGAAGGACGCCTCGCCCGACGCGCTGCGCGCGGAGGTCGAGCGGGCCGTTG CCGCGGGCCGCCGCCATCCGGACGCGCGCGTGTTCATCAACGATCACTGGCGGCTCGCGCTCGACGCGGGCGCATACGGC GTGCACCTCGGCCAGGAGGATCTGGAGACCGCCGATCTCGGCGCGATCGCGCGGGCGGGCGCGCGGCTCGGCCTGTCGAG CCACGGGTATTACGAAATGCTCGTCGCGCTGCAGTTCAAGCCGAGCTATCTCGCGCTCGGCCCGGTGTTCGCGACCGCGA CGAAGGCGGTTGCCGCGCCGCCGCAAGGCCTCGCGCGGCTTGCGCGCTACGTGCGCTTCGCCGGGCCGCAGGCGCCGCTC GTCGCGATCGGCGGAATCGCGCCCGACACGCTCGGCGCGGTGCTGGCGGCGGGCGTCGGCAGCGCGGCCGTCGTCAGCGC GATCACGGCGGCGACCGATTACCGGGAAGCGATTGTTGCATTGCAGCAAAACTTCGGACGATAA
Upstream 100 bases:
>100_bases GCGCCGCGTATCTCGCGGGGCCGATGGATGCGCGCGAGAGCGCGCACGCGAGCACGCCCGTCGTCGGCATGCCGTTCTGG CACCAGGACGGGAGCCACGC
Downstream 100 bases:
>100_bases TTTGACAATCTCTGACTGGAGCGCCTGAGCGGCCTTTGCGGCATCATTCCGATGCAGGCCCTATAATTCGGCGTTCTGCG TATAAGGATTGTCCGCTCCG
Product: thiamine-phosphate pyrophosphorylase
Products: NA
Alternate protein names: TMP pyrophosphorylase; TMP-PPase; Thiamine-phosphate synthase [H]
Number of amino acids: Translated: 367; Mature: 366
Protein sequence:
>367_residues MSAALPDAFWPPADELTEAAERIRATLGAWPQPAVRTRICLAPPEQPRAADLWVAIAGDAGAHAAQIARLNAAGAQAIVI DDASATLHTGAARHALASRAPLADDWIAALAAFLDCGFAASDALVLALAWRDGDEARGGDPWPVDPARFPRVLGLPAAPE PAFAPCPQRLGLYPVLPSAEWVERVLDCGVRTVQLRVKDASPDALRAEVERAVAAGRRHPDARVFINDHWRLALDAGAYG VHLGQEDLETADLGAIARAGARLGLSSHGYYEMLVALQFKPSYLALGPVFATATKAVAAPPQGLARLARYVRFAGPQAPL VAIGGIAPDTLGAVLAAGVGSAAVVSAITAATDYREAIVALQQNFGR
Sequences:
>Translated_367_residues MSAALPDAFWPPADELTEAAERIRATLGAWPQPAVRTRICLAPPEQPRAADLWVAIAGDAGAHAAQIARLNAAGAQAIVI DDASATLHTGAARHALASRAPLADDWIAALAAFLDCGFAASDALVLALAWRDGDEARGGDPWPVDPARFPRVLGLPAAPE PAFAPCPQRLGLYPVLPSAEWVERVLDCGVRTVQLRVKDASPDALRAEVERAVAAGRRHPDARVFINDHWRLALDAGAYG VHLGQEDLETADLGAIARAGARLGLSSHGYYEMLVALQFKPSYLALGPVFATATKAVAAPPQGLARLARYVRFAGPQAPL VAIGGIAPDTLGAVLAAGVGSAAVVSAITAATDYREAIVALQQNFGR >Mature_366_residues SAALPDAFWPPADELTEAAERIRATLGAWPQPAVRTRICLAPPEQPRAADLWVAIAGDAGAHAAQIARLNAAGAQAIVID DASATLHTGAARHALASRAPLADDWIAALAAFLDCGFAASDALVLALAWRDGDEARGGDPWPVDPARFPRVLGLPAAPEP AFAPCPQRLGLYPVLPSAEWVERVLDCGVRTVQLRVKDASPDALRAEVERAVAAGRRHPDARVFINDHWRLALDAGAYGV HLGQEDLETADLGAIARAGARLGLSSHGYYEMLVALQFKPSYLALGPVFATATKAVAAPPQGLARLARYVRFAGPQAPLV AIGGIAPDTLGAVLAAGVGSAAVVSAITAATDYREAIVALQQNFGR
Specific function: Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP) [H]
COG id: COG0352
COG function: function code H; Thiamine monophosphate synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the TMP-PPase family [H]
Homologues:
Organism=Escherichia coli, GI1790426, Length=208, Percent_Identity=55.7692307692308, Blast_Score=204, Evalue=8e-54,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR022998 - InterPro: IPR003733 [H]
Pfam domain/function: PF02581 TMP-TENI [H]
EC number: =2.5.1.3 [H]
Molecular weight: Translated: 38266; Mature: 38135
Theoretical pI: Translated: 5.91; Mature: 5.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAALPDAFWPPADELTEAAERIRATLGAWPQPAVRTRICLAPPEQPRAADLWVAIAGDA CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHEEEEECCCCCCCCCEEEEEEECCC GAHAAQIARLNAAGAQAIVIDDASATLHTGAARHALASRAPLADDWIAALAAFLDCGFAA CCHHHHHHHHHCCCCEEEEEECCCCHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHCCCCC SDALVLALAWRDGDEARGGDPWPVDPARFPRVLGLPAAPEPAFAPCPQRLGLYPVLPSAE CCEEEEEEEECCCCCCCCCCCCCCCHHHCCCEECCCCCCCCCCCCCHHHCCCEECCCCHH WVERVLDCGVRTVQLRVKDASPDALRAEVERAVAAGRRHPDARVFINDHWRLALDAGAYG HHHHHHHCCCEEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCEEEECCCEEEEEECCCCE VHLGQEDLETADLGAIARAGARLGLSSHGYYEMLVALQFKPSYLALGPVFATATKAVAAP EECCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCEEEHHHHHHHHHHHHCCC PQGLARLARYVRFAGPQAPLVAIGGIAPDTLGAVLAAGVGSAAVVSAITAATDYREAIVA HHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH LQQNFGR HHHHCCC >Mature Secondary Structure SAALPDAFWPPADELTEAAERIRATLGAWPQPAVRTRICLAPPEQPRAADLWVAIAGDA CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHEEEEECCCCCCCCCEEEEEEECCC GAHAAQIARLNAAGAQAIVIDDASATLHTGAARHALASRAPLADDWIAALAAFLDCGFAA CCHHHHHHHHHCCCCEEEEEECCCCHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHCCCCC SDALVLALAWRDGDEARGGDPWPVDPARFPRVLGLPAAPEPAFAPCPQRLGLYPVLPSAE CCEEEEEEEECCCCCCCCCCCCCCCHHHCCCEECCCCCCCCCCCCCHHHCCCEECCCCHH WVERVLDCGVRTVQLRVKDASPDALRAEVERAVAAGRRHPDARVFINDHWRLALDAGAYG HHHHHHHCCCEEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCEEEECCCEEEEEECCCCE VHLGQEDLETADLGAIARAGARLGLSSHGYYEMLVALQFKPSYLALGPVFATATKAVAAP EECCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCEEEHHHHHHHHHHHHCCC PQGLARLARYVRFAGPQAPLVAIGGIAPDTLGAVLAAGVGSAAVVSAITAATDYREAIVA HHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH LQQNFGR HHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA