| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is 126453236
Identifier: 126453236
GI number: 126453236
Start: 2287025
End: 2287504
Strand: Direct
Name: 126453236
Synonym: BURPS1106A_2309
Alternate gene names: NA
Gene position: 2287025-2287504 (Clockwise)
Preceding gene: 126451535
Following gene: 126451712
Centisome position: 57.34
GC content: 70.62
Gene sequence:
>480_bases ATGGCATGGAGACAACACCGCTGGTTCCGGCGCTGGCTGATCGTCATCGTGTTCTGGGCCGTGCCCGTCGCGATCGTCGC CGTGCGCGAGATCCGCGAGGAGATGGCCTATAACTACGCCGACCTCAAGCTTGCGCTCACGACCTGGCAGCTCACCGACG CGCAGCGCGCGGCGGGCGCGGCGAAGGTCTGCCGCGGCGAGCCTGACGAAGCGCGCGCGGCGGGCTGCCCCGCCGACGTG CTCGCGGCGAACGCGCGCCGGCAGCAGGAAGCGCGCGACGAATTCGCCGTGCGCAAGCGCACGCTCGCGAGCTATCTGTG GCATGCATTCGTCGGCTACTGGATCGTCCCCGCCGCGTTCCTGTTCGCATGCGGCGTCGTGATCGGCCTCGTGCGCCGCG CGTTGCGGCGCCCGCCCATCAAGCCACCCGCCAAGCCGCCCCTCGAACCACCCCTCGAGCCCCCCGTTTCGCATCACTGA
Upstream 100 bases:
>100_bases TTCTTCTATGATGGCTGCAGCGCGGCCCTCCCCACGACAAGAAGCGCCATCGGGCCGCCCTCATGACGGATGCGCACCGC GCGTCAAACGGAGGCACGGG
Downstream 100 bases:
>100_bases CGATTCGCGCCGCGCGCACGCCCCCGCGTGACGCGCCATGCGCGCGGATCGCCGATCGGCATGAAGCTTGGCGTGCGACA ACGTGCATGCACGCGCGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 159; Mature: 158
Protein sequence:
>159_residues MAWRQHRWFRRWLIVIVFWAVPVAIVAVREIREEMAYNYADLKLALTTWQLTDAQRAAGAAKVCRGEPDEARAAGCPADV LAANARRQQEARDEFAVRKRTLASYLWHAFVGYWIVPAAFLFACGVVIGLVRRALRRPPIKPPAKPPLEPPLEPPVSHH
Sequences:
>Translated_159_residues MAWRQHRWFRRWLIVIVFWAVPVAIVAVREIREEMAYNYADLKLALTTWQLTDAQRAAGAAKVCRGEPDEARAAGCPADV LAANARRQQEARDEFAVRKRTLASYLWHAFVGYWIVPAAFLFACGVVIGLVRRALRRPPIKPPAKPPLEPPLEPPVSHH >Mature_158_residues AWRQHRWFRRWLIVIVFWAVPVAIVAVREIREEMAYNYADLKLALTTWQLTDAQRAAGAAKVCRGEPDEARAAGCPADVL AANARRQQEARDEFAVRKRTLASYLWHAFVGYWIVPAAFLFACGVVIGLVRRALRRPPIKPPAKPPLEPPLEPPVSHH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18057; Mature: 17926
Theoretical pI: Translated: 10.57; Mature: 10.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAWRQHRWFRRWLIVIVFWAVPVAIVAVREIREEMAYNYADLKLALTTWQLTDAQRAAGA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH AKVCRGEPDEARAAGCPADVLAANARRQQEARDEFAVRKRTLASYLWHAFVGYWIVPAAF HHHHCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LFACGVVIGLVRRALRRPPIKPPAKPPLEPPLEPPVSHH HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure AWRQHRWFRRWLIVIVFWAVPVAIVAVREIREEMAYNYADLKLALTTWQLTDAQRAAGA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH AKVCRGEPDEARAAGCPADVLAANARRQQEARDEFAVRKRTLASYLWHAFVGYWIVPAAF HHHHCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LFACGVVIGLVRRALRRPPIKPPAKPPLEPPLEPPVSHH HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA