| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is 126453212
Identifier: 126453212
GI number: 126453212
Start: 1087477
End: 1088145
Strand: Reverse
Name: 126453212
Synonym: BURPS1106A_1107
Alternate gene names: NA
Gene position: 1088145-1087477 (Counterclockwise)
Preceding gene: 126454424
Following gene: 126452446
Centisome position: 27.28
GC content: 69.66
Gene sequence:
>669_bases GTGCTCGATGGGCGTTTTGTCAATTGTTTGCATTTCTCGTCGGACAATTGCAGAACAATGGCGCTCTACGCTCGCTGCGC CGACGCGCGGCGCACGAAGACAGGACCGCATTCAGGGATGAACCATCGCATCGCACGGCCGGCGCGCCGTTGGGCCGCAT GGGCCACACTCGGCGCCGCCGCCTTCTCGACGCTGCTGTCCGGCTGCAATTCGCTCTATAGCGAAGGCGCGACGGCCGGC GCGGGTATCGCCGGCGCGGCCATCGCGTCGAAAGTCACCAGCAACGCCGCTGTCGCGACCGGCATCGGCCTGGGCGCCGT CGCCGGCGCGCGCGCGGGCGTCCAGTACACGCAGCGCGTCGCGCATCGCTATTCGCAGGCGCAGATCGCCGCCGCGGCGG GGCCGCTCGAGGTCGGCGGCGTCGCCCCCTGGTCGACGCATCACTCGTTCCCGATCGAGGACGACGAGCACGGCCGCGTG ACCGTGAGCCGGCTCATCAGCGTCGGGCCGCTCGACTGCAAGGAAATCGTGTTCTCGGTCGACACCGACGCGAAGGGCAA CGAGGCCGCTCAATCGGGCTTCTACGTCGCGACGATCTGCCGGGACGGCCCCGCGTGGAAGTGGGCGTCGGCCGAACCCG CCACCGGCCGGTGGGGAGCGCTGCAATGA
Upstream 100 bases:
>100_bases CGTCGCGAGAGGTTCACGGTAACAATTACATTCAATTTGTAACGATTCGACCCCTGTCCGCCGCTTTGCACCAAAATATT GCCGCTCGCGCGCGCTCGGC
Downstream 100 bases:
>100_bases GCGTGCGCGTGCGCGCGGCGCTGCCGCTCGCGGCGGCGCTCGCGCTCGCCGCGGCCGCGCTCGGCCTCTCCGGCTGCGGC TCGGTCGGCGCGGCAAGCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 222; Mature: 222
Protein sequence:
>222_residues MLDGRFVNCLHFSSDNCRTMALYARCADARRTKTGPHSGMNHRIARPARRWAAWATLGAAAFSTLLSGCNSLYSEGATAG AGIAGAAIASKVTSNAAVATGIGLGAVAGARAGVQYTQRVAHRYSQAQIAAAAGPLEVGGVAPWSTHHSFPIEDDEHGRV TVSRLISVGPLDCKEIVFSVDTDAKGNEAAQSGFYVATICRDGPAWKWASAEPATGRWGALQ
Sequences:
>Translated_222_residues MLDGRFVNCLHFSSDNCRTMALYARCADARRTKTGPHSGMNHRIARPARRWAAWATLGAAAFSTLLSGCNSLYSEGATAG AGIAGAAIASKVTSNAAVATGIGLGAVAGARAGVQYTQRVAHRYSQAQIAAAAGPLEVGGVAPWSTHHSFPIEDDEHGRV TVSRLISVGPLDCKEIVFSVDTDAKGNEAAQSGFYVATICRDGPAWKWASAEPATGRWGALQ >Mature_222_residues MLDGRFVNCLHFSSDNCRTMALYARCADARRTKTGPHSGMNHRIARPARRWAAWATLGAAAFSTLLSGCNSLYSEGATAG AGIAGAAIASKVTSNAAVATGIGLGAVAGARAGVQYTQRVAHRYSQAQIAAAAGPLEVGGVAPWSTHHSFPIEDDEHGRV TVSRLISVGPLDCKEIVFSVDTDAKGNEAAQSGFYVATICRDGPAWKWASAEPATGRWGALQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23131; Mature: 23131
Theoretical pI: Translated: 8.83; Mature: 8.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLDGRFVNCLHFSSDNCRTMALYARCADARRTKTGPHSGMNHRIARPARRWAAWATLGAA CCCCEEEEEEEECCCCCEEHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHH AFSTLLSGCNSLYSEGATAGAGIAGAAIASKVTSNAAVATGIGLGAVAGARAGVQYTQRV HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHHHH AHRYSQAQIAAAAGPLEVGGVAPWSTHHSFPIEDDEHGRVTVSRLISVGPLDCKEIVFSV HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHCCCCCHHHHEEEC DTDAKGNEAAQSGFYVATICRDGPAWKWASAEPATGRWGALQ CCCCCCCHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MLDGRFVNCLHFSSDNCRTMALYARCADARRTKTGPHSGMNHRIARPARRWAAWATLGAA CCCCEEEEEEEECCCCCEEHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHH AFSTLLSGCNSLYSEGATAGAGIAGAAIASKVTSNAAVATGIGLGAVAGARAGVQYTQRV HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHHHH AHRYSQAQIAAAAGPLEVGGVAPWSTHHSFPIEDDEHGRVTVSRLISVGPLDCKEIVFSV HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHCCCCCHHHHEEEC DTDAKGNEAAQSGFYVATICRDGPAWKWASAEPATGRWGALQ CCCCCCCHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA