| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is paaI [H]
Identifier: 126453197
GI number: 126453197
Start: 3738826
End: 3739629
Strand: Direct
Name: paaI [H]
Synonym: BURPS1106A_3838
Alternate gene names: 126453197
Gene position: 3738826-3739629 (Clockwise)
Preceding gene: 126454357
Following gene: 126452809
Centisome position: 93.74
GC content: 68.03
Gene sequence:
>804_bases ATGACGACGACCCCACAACATCTCGCGTACGTGCTGCGCCTCGCCGACAACGCGCTGATCCTCGGCCAGCGCAACGCCGA ATGGTGCGGGCATGGCCCGGTGCTCGAGGAAGACATCGCGCTCACGAACATGAGCCTCGATCTGATCGGCCAGGCGCGCC TGCTGTATACGCACGCGGCCGAGCTCGAGCGGCAGCTCACCGGCGCCGCGCGGACCGAGGACGACTACGCGTACTTCCGC GCCGAACGCGAATTCGCGAATTACACATTCGTCGAGCTGCCGCACTACGGCCCGCTCTGCGGCACCGCGCACGCGGAGCT CGACTATGCGGTGACCGTCGTGCGCAACTTCCTCTATTCGACGCTGATGCTGCACCTATGGACCGCGCTCGAGGCGTCGG GCGATGCGCAACTCGCGGCGATCGCGGCGAAATCGGTGAAGGAGACGCGCTATCACGAGCACCACGCGCGTGAATGGCTG ATCCGCTTCGGCGACGGCACCGATGAATCGCACCGCCGCGCGCAGGCCGCGCTCGACCATTTGATGCCGTATACGCGCGA ATTCTTCGCGACGGACGCGATAGACGACGCGGCAGCGGCGGCCGGCATCGGCCCGGCGATCGCGTCGATCGAGCCGGCGT GGCGCGCCGACATCGAGGCCGCGCTCGCCGAGGCGACGCTCGCGCTGCCCACCGTCGGCCAGTACGTACCAACCGGCAAG CGCGGCGAGCATTCGGAACATATGGGCTATCTGCTCGCCGAGCTGCAGAGCGTCGCGCGCCAGCACCCGGGCGCGACCTG GTAA
Upstream 100 bases:
>100_bases GAGAAGGCCGAGATGTTCGAACCGGCGGGCGACAAGATCTATCGTCATCCGACGTTCTACACGCTGCCCGACGAAGTCAA CCACATGTGAGCGGCCAGCC
Downstream 100 bases:
>100_bases GCCCGCACCCGAACGACGAACGACGGAGCCAGACGATGCCCGCCTTCCCCGCCTCCGCCCTCGGCCAACCGACCGCCGCC GATGCCCGTGAGGGCCGGCG
Product: phenylacetate-CoA oxygenase, PaaI subunit
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 267; Mature: 266
Protein sequence:
>267_residues MTTTPQHLAYVLRLADNALILGQRNAEWCGHGPVLEEDIALTNMSLDLIGQARLLYTHAAELERQLTGAARTEDDYAYFR AEREFANYTFVELPHYGPLCGTAHAELDYAVTVVRNFLYSTLMLHLWTALEASGDAQLAAIAAKSVKETRYHEHHAREWL IRFGDGTDESHRRAQAALDHLMPYTREFFATDAIDDAAAAAGIGPAIASIEPAWRADIEAALAEATLALPTVGQYVPTGK RGEHSEHMGYLLAELQSVARQHPGATW
Sequences:
>Translated_267_residues MTTTPQHLAYVLRLADNALILGQRNAEWCGHGPVLEEDIALTNMSLDLIGQARLLYTHAAELERQLTGAARTEDDYAYFR AEREFANYTFVELPHYGPLCGTAHAELDYAVTVVRNFLYSTLMLHLWTALEASGDAQLAAIAAKSVKETRYHEHHAREWL IRFGDGTDESHRRAQAALDHLMPYTREFFATDAIDDAAAAAGIGPAIASIEPAWRADIEAALAEATLALPTVGQYVPTGK RGEHSEHMGYLLAELQSVARQHPGATW >Mature_266_residues TTTPQHLAYVLRLADNALILGQRNAEWCGHGPVLEEDIALTNMSLDLIGQARLLYTHAAELERQLTGAARTEDDYAYFRA EREFANYTFVELPHYGPLCGTAHAELDYAVTVVRNFLYSTLMLHLWTALEASGDAQLAAIAAKSVKETRYHEHHAREWLI RFGDGTDESHRRAQAALDHLMPYTREFFATDAIDDAAAAAGIGPAIASIEPAWRADIEAALAEATLALPTVGQYVPTGKR GEHSEHMGYLLAELQSVARQHPGATW
Specific function: May be part of a multicomponent oxygenase involved in phenylacetyl-CoA hydroxylation [H]
COG id: COG3396
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1787656, Length=262, Percent_Identity=42.7480916030534, Blast_Score=201, Evalue=3e-53,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012347 - InterPro: IPR009078 - InterPro: IPR011882 - InterPro: IPR007814 [H]
Pfam domain/function: PF05138 PaaA_PaaC [H]
EC number: NA
Molecular weight: Translated: 29495; Mature: 29364
Theoretical pI: Translated: 5.15; Mature: 5.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTTPQHLAYVLRLADNALILGQRNAEWCGHGPVLEEDIALTNMSLDLIGQARLLYTHAA CCCCHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHH ELERQLTGAARTEDDYAYFRAEREFANYTFVELPHYGPLCGTAHAELDYAVTVVRNFLYS HHHHHHHCCCCCCCHHHHHHHHHHHCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHH TLMLHLWTALEASGDAQLAAIAAKSVKETRYHEHHAREWLIRFGDGTDESHRRAQAALDH HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH LMPYTREFFATDAIDDAAAAAGIGPAIASIEPAWRADIEAALAEATLALPTVGQYVPTGK HHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCC RGEHSEHMGYLLAELQSVARQHPGATW CCCCHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure TTTPQHLAYVLRLADNALILGQRNAEWCGHGPVLEEDIALTNMSLDLIGQARLLYTHAA CCCHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHH ELERQLTGAARTEDDYAYFRAEREFANYTFVELPHYGPLCGTAHAELDYAVTVVRNFLYS HHHHHHHCCCCCCCHHHHHHHHHHHCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHH TLMLHLWTALEASGDAQLAAIAAKSVKETRYHEHHAREWLIRFGDGTDESHRRAQAALDH HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH LMPYTREFFATDAIDDAAAAAGIGPAIASIEPAWRADIEAALAEATLALPTVGQYVPTGK HHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCC RGEHSEHMGYLLAELQSVARQHPGATW CCCCHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9748275; 9278503; 10766858 [H]