| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is bcp [H]
Identifier: 126453167
GI number: 126453167
Start: 1334383
End: 1334931
Strand: Direct
Name: bcp [H]
Synonym: BURPS1106A_1364
Alternate gene names: 126453167
Gene position: 1334383-1334931 (Clockwise)
Preceding gene: 126452474
Following gene: 126454308
Centisome position: 33.46
GC content: 64.85
Gene sequence:
>549_bases ATGAATCGAAAACTGGCATCGGGCGCGGCGGCCGCGCTCTTCGCGCTGTACGCGGTCGCGGCGCACGCGGTGCTGAAGGT CGGCGACGCCGCGCCCGACTTCAGCGCGCAGGCGTCGCTCGGCGGCAAGACTTACACGTATTCGCTCGCCGACGCGCTGA AGAAAGGCCCCGTCGTGCTGTACTTCTATCCGGCCGCGTTCACCACCGGCTGCACGATCGAGGCGCACGCGTTCGCCGAG GCGATCGATGCTTACAAACGGTACGGTGCGACGGTGATCGGCGTGTCGGCCGACGACATCGGCACGCTGACGAAGTTTTC GGTCAGCGAATGCCGCAGCAAGTTCCCGGTCGCCGCGGATCCGGACGCGAAGATCATTCGCGAATACGATGCGAAGCTGC CGGCGATCTCGAAGGCGAATCGCGTGTCCTATGTGATTTCGCCGGACGGCAAGGTGCTCTATGAATACACGAGCCTGTCG CCCGACAAGCACGTCGAGAACACGCTGAATGCGGTGAAGGCGTGGGCGGCGTCGCACCGGCAGCCGTGA
Upstream 100 bases:
>100_bases TTCGTCATGCGCGTTAGTTCGAGATGCGAACGCGATCGAACGGCTTGGCGAGGGGGCTAGACCTTGTTGTGCATAGGGCT ATTCAGGAGCGAGGACTCGG
Downstream 100 bases:
>100_bases CACGTTGACACGGTGTCGGCGCGGCACGGGCGGCGAAGAGCGGCGCGTGCGTCGACGTGGCCGTCCGTGACGCGTGCCGG GCGCGGCCGGTATGCGCCGC
Product: antioxidant, AhpC/TSA family protein
Products: NA
Alternate protein names: Bacterioferritin comigratory protein; Thioredoxin reductase [H]
Number of amino acids: Translated: 182; Mature: 182
Protein sequence:
>182_residues MNRKLASGAAAALFALYAVAAHAVLKVGDAAPDFSAQASLGGKTYTYSLADALKKGPVVLYFYPAAFTTGCTIEAHAFAE AIDAYKRYGATVIGVSADDIGTLTKFSVSECRSKFPVAADPDAKIIREYDAKLPAISKANRVSYVISPDGKVLYEYTSLS PDKHVENTLNAVKAWAASHRQP
Sequences:
>Translated_182_residues MNRKLASGAAAALFALYAVAAHAVLKVGDAAPDFSAQASLGGKTYTYSLADALKKGPVVLYFYPAAFTTGCTIEAHAFAE AIDAYKRYGATVIGVSADDIGTLTKFSVSECRSKFPVAADPDAKIIREYDAKLPAISKANRVSYVISPDGKVLYEYTSLS PDKHVENTLNAVKAWAASHRQP >Mature_182_residues MNRKLASGAAAALFALYAVAAHAVLKVGDAAPDFSAQASLGGKTYTYSLADALKKGPVVLYFYPAAFTTGCTIEAHAFAE AIDAYKRYGATVIGVSADDIGTLTKFSVSECRSKFPVAADPDAKIIREYDAKLPAISKANRVSYVISPDGKVLYEYTSLS PDKHVENTLNAVKAWAASHRQP
Specific function: Unknown
COG id: COG1225
COG function: function code O; Peroxiredoxin
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 thioredoxin domain [H]
Homologues:
Organism=Escherichia coli, GI1788825, Length=158, Percent_Identity=29.746835443038, Blast_Score=74, Evalue=4e-15, Organism=Drosophila melanogaster, GI17738015, Length=179, Percent_Identity=30.1675977653631, Blast_Score=65, Evalue=2e-11,
Paralogues:
None
Copy number: 920 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000866 - InterPro: IPR017936 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00578 AhpC-TSA [H]
EC number: =1.11.1.15 [H]
Molecular weight: Translated: 19327; Mature: 19327
Theoretical pI: Translated: 8.93; Mature: 8.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRKLASGAAAALFALYAVAAHAVLKVGDAAPDFSAQASLGGKTYTYSLADALKKGPVVL CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCCCEEEEHHHHHHHHCCEEE YFYPAAFTTGCTIEAHAFAEAIDAYKRYGATVIGVSADDIGTLTKFSVSECRSKFPVAAD EEECCCCCCCCEEEHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCC PDAKIIREYDAKLPAISKANRVSYVISPDGKVLYEYTSLSPDKHVENTLNAVKAWAASHR CCHHHHHHHHCCCCCCCCCCCEEEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCC QP CC >Mature Secondary Structure MNRKLASGAAAALFALYAVAAHAVLKVGDAAPDFSAQASLGGKTYTYSLADALKKGPVVL CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCCCEEEEHHHHHHHHCCEEE YFYPAAFTTGCTIEAHAFAEAIDAYKRYGATVIGVSADDIGTLTKFSVSECRSKFPVAAD EEECCCCCCCCEEEHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCC PDAKIIREYDAKLPAISKANRVSYVISPDGKVLYEYTSLSPDKHVENTLNAVKAWAASHR CCHHHHHHHHCCCCCCCCCCCEEEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCC QP CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]