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The map label for this gene is lutB [H]

Identifier: 126453135

GI number: 126453135

Start: 2616629

End: 2618080

Strand: Reverse

Name: lutB [H]

Synonym: BURPS1106A_2659

Alternate gene names: 126453135

Gene position: 2618080-2616629 (Counterclockwise)

Preceding gene: 126452917

Following gene: 126451997

Centisome position: 65.64

GC content: 68.53

Gene sequence:

>1452_bases
ATGCAAGTCCAATCGATGCACTTCAAGGCGCGCGCCGGCGAGAAGCTCGCCGATGCGCGACTGCAGGAAAACCTGAGGAG
ACTCTCGACGAAATTCGTGTCGGGCCGCGCCGAGGCGGTCACGCAGCTCGATTTCGTCGCGACGCGCGCGCAGCTCAAGG
CGCGCCGCGATCGCGCGCTCGAGCGGCTCGACGTATGGCTCGAGATATTCGAGCGCGAGGCCGCTCGGCGCGGGACGACC
GTGCTGTACGCGCAGACGACGCAGGACGCGGCGAAGCTGGTCGCCGACATCGCGCGCCGGCACGACGTGAAGAAGGTCAT
CAAGACGAAATCGATGGTGACCGAGGAGGCGAATCTCAACGCGGTGCTCGCGCGGCTCGGCGTGCAGTCGATCGAGACGG
ATCTCGGCGAATACATTCTGCAGATCAACGGCAACGAGCCGCCGAGCCACATCATCGCGCCCGTGCTGCACCGGGACAAG
GAAGAGATTGCCGATCTGTTCGCGAAGACGCACGGGCGGGCGCGTCTCACCGACATTTCCGAGATGACCCGCGAGGCGCG
CGAGGTGCTGCGTCCGCATTTCCTGTCGGCGGACATGGGCGTGACGGGCGGCAACTTCTTGATCGCCGAGACGGGTTCCG
TCGTGCTCGTGACGAACGAGGGCAACGAAGGAATGTGTACGGTGCTGCCGCGCGTGCATGTGGCGGTGACGGGAATCGAG
AAGGTGTTGCCGACGCTCGAGGATCTCGCGACCGCGATGCGCCTGTTGCCGCGCTCGGCGACCGGGCAGAAGACGTCGAA
CTATTTCTCGCTGCTGACCGGCGTGCGCGGCGACGGCGACGAGGACGGGCCCGAGCACGCCTATGTCGTGCTCGTCGACG
GCGGCCGCAGCGGGCTCATCGGCGGCGAATTCCAGGAGATGCTCCGCTGCATTCGCTGCGGCGCGTGCATGAATCATTGC
CCGGTCTATCAGAAAGTCGGTGGGCACGCGTACGGCTGGGTGTATCCGGGGCCGATGGGCTCGGTGCTGACGCCGAGCTA
CGTCGGGCTCGCCAATGCGCTCGATTTGCCGCAGGCGGCGACGCTCTGCGGCGAGTGCGACAGCGTCTGTCCGGTCGGCA
TCCCGATTTCGGGCTTGCTGCGCAAGCTGCGCGAAAAGCAGGTCGAGCGGCGCCTGCGGCCGTGGCGCGAGCGCGCGGCA
CTGGCGGCCTGGGGCTTTTTCGCGCGGCGGCCGGCGCTGTACGCGCTCGCGACGAAGCTCGCGGTGCGCGTGCTCGAGCG
GGCGGGCGGTTCGGCGGGCGGCGTGGCGGGGATGCTCGGGCGCATGCCGTTCGCGGGCGGCTGGGCCCGAGGTTGGACGG
CTACGCGCGACATCCCGGCCCCCGCCGGGCGGACGTTCCGCGAGCTGTATGCGGCGTCGCGCACGCATCTCGACCCGTCT
TCGACGCGCTGA

Upstream 100 bases:

>100_bases
CGGCCCGCCGCTACGAGACACGGAGACGAGAGACGAGAGCGCCGCTGCGAGCGCACGACGAGCAAGCGCACGACGCGATT
CACGAACCCCACGAGCCGCC

Downstream 100 bases:

>100_bases
CCCGCTTGTTCTCGGCCGCGACTGTTCATCGCGCGACAACACTGCGTTCGCTATTCATGGATTTATCTCAATAGATGTGA
TCTATAGAATGTCGACATCA

Product: iron-sulfur cluster binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 483; Mature: 483

Protein sequence:

>483_residues
MQVQSMHFKARAGEKLADARLQENLRRLSTKFVSGRAEAVTQLDFVATRAQLKARRDRALERLDVWLEIFEREAARRGTT
VLYAQTTQDAAKLVADIARRHDVKKVIKTKSMVTEEANLNAVLARLGVQSIETDLGEYILQINGNEPPSHIIAPVLHRDK
EEIADLFAKTHGRARLTDISEMTREAREVLRPHFLSADMGVTGGNFLIAETGSVVLVTNEGNEGMCTVLPRVHVAVTGIE
KVLPTLEDLATAMRLLPRSATGQKTSNYFSLLTGVRGDGDEDGPEHAYVVLVDGGRSGLIGGEFQEMLRCIRCGACMNHC
PVYQKVGGHAYGWVYPGPMGSVLTPSYVGLANALDLPQAATLCGECDSVCPVGIPISGLLRKLREKQVERRLRPWRERAA
LAAWGFFARRPALYALATKLAVRVLERAGGSAGGVAGMLGRMPFAGGWARGWTATRDIPAPAGRTFRELYAASRTHLDPS
STR

Sequences:

>Translated_483_residues
MQVQSMHFKARAGEKLADARLQENLRRLSTKFVSGRAEAVTQLDFVATRAQLKARRDRALERLDVWLEIFEREAARRGTT
VLYAQTTQDAAKLVADIARRHDVKKVIKTKSMVTEEANLNAVLARLGVQSIETDLGEYILQINGNEPPSHIIAPVLHRDK
EEIADLFAKTHGRARLTDISEMTREAREVLRPHFLSADMGVTGGNFLIAETGSVVLVTNEGNEGMCTVLPRVHVAVTGIE
KVLPTLEDLATAMRLLPRSATGQKTSNYFSLLTGVRGDGDEDGPEHAYVVLVDGGRSGLIGGEFQEMLRCIRCGACMNHC
PVYQKVGGHAYGWVYPGPMGSVLTPSYVGLANALDLPQAATLCGECDSVCPVGIPISGLLRKLREKQVERRLRPWRERAA
LAAWGFFARRPALYALATKLAVRVLERAGGSAGGVAGMLGRMPFAGGWARGWTATRDIPAPAGRTFRELYAASRTHLDPS
STR
>Mature_483_residues
MQVQSMHFKARAGEKLADARLQENLRRLSTKFVSGRAEAVTQLDFVATRAQLKARRDRALERLDVWLEIFEREAARRGTT
VLYAQTTQDAAKLVADIARRHDVKKVIKTKSMVTEEANLNAVLARLGVQSIETDLGEYILQINGNEPPSHIIAPVLHRDK
EEIADLFAKTHGRARLTDISEMTREAREVLRPHFLSADMGVTGGNFLIAETGSVVLVTNEGNEGMCTVLPRVHVAVTGIE
KVLPTLEDLATAMRLLPRSATGQKTSNYFSLLTGVRGDGDEDGPEHAYVVLVDGGRSGLIGGEFQEMLRCIRCGACMNHC
PVYQKVGGHAYGWVYPGPMGSVLTPSYVGLANALDLPQAATLCGECDSVCPVGIPISGLLRKLREKQVERRLRPWRERAA
LAAWGFFARRPALYALATKLAVRVLERAGGSAGGVAGMLGRMPFAGGWARGWTATRDIPAPAGRTFRELYAASRTHLDPS
STR

Specific function: Is involved in L-lactate degradation and allows cells to grow with lactate as the sole carbon source. Has probably a role as an electron transporter during oxidation of L-lactate [H]

COG id: COG1139

COG function: function code C; Uncharacterized conserved protein containing a ferredoxin-like domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

Organism=Escherichia coli, GI1786498, Length=471, Percent_Identity=38.4288747346072, Blast_Score=355, Evalue=4e-99,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017900
- InterPro:   IPR003741
- InterPro:   IPR004452
- InterPro:   IPR002698
- InterPro:   IPR012285
- InterPro:   IPR009051
- InterPro:   IPR022825 [H]

Pfam domain/function: PF02589 DUF162 [H]

EC number: NA

Molecular weight: Translated: 52789; Mature: 52789

Theoretical pI: Translated: 9.50; Mature: 9.50

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQVQSMHFKARAGEKLADARLQENLRRLSTKFVSGRAEAVTQLDFVATRAQLKARRDRAL
CCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
ERLDVWLEIFEREAARRGTTVLYAQTTQDAAKLVADIARRHDVKKVIKTKSMVTEEANLN
HHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
AVLARLGVQSIETDLGEYILQINGNEPPSHIIAPVLHRDKEEIADLFAKTHGRARLTDIS
HHHHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHH
EMTREAREVLRPHFLSADMGVTGGNFLIAETGSVVLVTNEGNEGMCTVLPRVHVAVTGIE
HHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCEEEEECCCCCCEEEECCHHHHHHHHHH
KVLPTLEDLATAMRLLPRSATGQKTSNYFSLLTGVRGDGDEDGPEHAYVVLVDGGRSGLI
HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCC
GGEFQEMLRCIRCGACMNHCPVYQKVGGHAYGWVYPGPMGSVLTPSYVGLANALDLPQAA
CHHHHHHHHHHHHHHHHHCCCHHHHHCCCEEEEECCCCCCCCCCCHHHHHHHHCCCCHHH
TLCGECDSVCPVGIPISGLLRKLREKQVERRLRPWRERAALAAWGFFARRPALYALATKL
HHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH
AVRVLERAGGSAGGVAGMLGRMPFAGGWARGWTATRDIPAPAGRTFRELYAASRTHLDPS
HHHHHHHCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCC
STR
CCC
>Mature Secondary Structure
MQVQSMHFKARAGEKLADARLQENLRRLSTKFVSGRAEAVTQLDFVATRAQLKARRDRAL
CCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
ERLDVWLEIFEREAARRGTTVLYAQTTQDAAKLVADIARRHDVKKVIKTKSMVTEEANLN
HHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
AVLARLGVQSIETDLGEYILQINGNEPPSHIIAPVLHRDKEEIADLFAKTHGRARLTDIS
HHHHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHH
EMTREAREVLRPHFLSADMGVTGGNFLIAETGSVVLVTNEGNEGMCTVLPRVHVAVTGIE
HHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCEEEEECCCCCCEEEECCHHHHHHHHHH
KVLPTLEDLATAMRLLPRSATGQKTSNYFSLLTGVRGDGDEDGPEHAYVVLVDGGRSGLI
HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCC
GGEFQEMLRCIRCGACMNHCPVYQKVGGHAYGWVYPGPMGSVLTPSYVGLANALDLPQAA
CHHHHHHHHHHHHHHHHHCCCHHHHHCCCEEEEECCCCCCCCCCCHHHHHHHHCCCCHHH
TLCGECDSVCPVGIPISGLLRKLREKQVERRLRPWRERAALAAWGFFARRPALYALATKL
HHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH
AVRVLERAGGSAGGVAGMLGRMPFAGGWARGWTATRDIPAPAGRTFRELYAASRTHLDPS
HHHHHHHCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCC
STR
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA