| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
Click here to switch to the map view.
The map label for this gene is aroG [H]
Identifier: 126453129
GI number: 126453129
Start: 3248127
End: 3249392
Strand: Direct
Name: aroG [H]
Synonym: BURPS1106A_3325
Alternate gene names: 126453129
Gene position: 3248127-3249392 (Clockwise)
Preceding gene: 126453984
Following gene: 126454732
Centisome position: 81.44
GC content: 66.43
Gene sequence:
>1266_bases GTGATGGCGCGCGAAGCGCAACCGAATTCCCGAAAAACCGCCGGCGAACCCGGCGGTTTTTTTTCGCCCCGCCGGTTCGC AAGCAGGGACGACGGGCCGATCCACCGCTTTACCGAATCACCGATTTGTCGAATCGAACCGCCAGCCGCACCCGCGCACG CCGGGCGGCGCACCGAACCGGAGAACTCAAGCATGCCCCCGCACAATACCGACGACGTCCGCATCCGTGAACTGAAGGAG CTGACTCCGCCCGCCCACCTGATCCGCGAATTCGCGCTCGGCGAGGCGGTGTCGGAGCTCATCTACAACGCGCGCCAGGC GATGCACCGGATCCTGCACGGGATGGACGATCGCCTGATCGTCATCATCGGGCCGTGCTCGATCCACGACACGAAGGCGG CGCTCGAATACGCGGGCCGGCTCGTCCAGGAGCGCGAGCGCTTCGCAAGCGAACTCGAGATCGTAATGCGCGTGTACTTC GAGAAGCCGCGCACGACGGTCGGCTGGAAGGGGCTCATCAACGATCCGCACCTGGATAACAGCTTCAAGATCAACGACGG CCTGCGCACCGCGCGCGAGCTGCTGCTGCAGATCAACGAGATGGGGCTGCCCGCCGGCACCGAATACCTCGACATGATCA GCCCGCAGTACATCGCGGACCTGATCTCGTGGGGCGCGATCGGCGCGCGCACGACCGAATCGCAGGTGCACCGCGAGCTC GCGTCGGGGCTGTCGTGCCCGGTCGGCTTCAAGAACGGCACCGACGGCAACGTGAAGATCGCGGTCGACGCGATCAAGGC CGCATCGCAGCCGCACCATTTCCTGTCGGTGACGAAGGGCGGCCATTCGGCGATCGTGTCGACGGCCGGCAACGAGGACT GCCACGTGATCCTGCGCGGCGGCAAGGCGCCGAACTACGATGCCGACAGCGTGAACGCCGCGTGCGCGGACATCGGCAAG GCCGGCCTCGCCGCGCGCCTGATGATCGACGCGAGCCATGCGAACAGCTCGAAGAAGCACGAGAACCAGATTCCGGTATG CGCGGACATCGGCCGCCAGATCGCCGCGGGCGACGAGCGCATCGTCGGCGTGATGGTCGAGTCGCACCTCGTCGAAGGCC GCCAGGACCTGAAGGAAGGCTGCCCGCTCACGTACGGCCAGAGCATCACCGATGCATGCATCAACTGGGACGACAGCGTG AAGGTGCTCGAAGGGCTCGCCGAAGCGGTGAAGGCGCGGCGCGTCGCGCGCGGCAGCGGCAACTGA
Upstream 100 bases:
>100_bases TTTCTCACATCGCTTCATTGACGCACCGCATTCCCGCCATGTCCGCAAAGTTTTACTTTTACTTTTTTTGGCATCTCAGG CCGCTGGCGGATCGAGAGGA
Downstream 100 bases:
>100_bases TCGGCGCGGGCGGCGGCGAATCGTCCCGTCCGGTTTCGCGTGATGCGGCCGTTCGCGGTTCGTGGTTTGCCGGCCGCTCG TCTCCGCCGGCTCGCCGCGC
Product: phospho-2-dehydro-3-deoxyheptonate aldolase
Products: NA
Alternate protein names: 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase; DAHP synthase; Phospho-2-keto-3-deoxyheptonate aldolase [H]
Number of amino acids: Translated: 421; Mature: 421
Protein sequence:
>421_residues MMAREAQPNSRKTAGEPGGFFSPRRFASRDDGPIHRFTESPICRIEPPAAPAHAGRRTEPENSSMPPHNTDDVRIRELKE LTPPAHLIREFALGEAVSELIYNARQAMHRILHGMDDRLIVIIGPCSIHDTKAALEYAGRLVQERERFASELEIVMRVYF EKPRTTVGWKGLINDPHLDNSFKINDGLRTARELLLQINEMGLPAGTEYLDMISPQYIADLISWGAIGARTTESQVHREL ASGLSCPVGFKNGTDGNVKIAVDAIKAASQPHHFLSVTKGGHSAIVSTAGNEDCHVILRGGKAPNYDADSVNAACADIGK AGLAARLMIDASHANSSKKHENQIPVCADIGRQIAAGDERIVGVMVESHLVEGRQDLKEGCPLTYGQSITDACINWDDSV KVLEGLAEAVKARRVARGSGN
Sequences:
>Translated_421_residues MMAREAQPNSRKTAGEPGGFFSPRRFASRDDGPIHRFTESPICRIEPPAAPAHAGRRTEPENSSMPPHNTDDVRIRELKE LTPPAHLIREFALGEAVSELIYNARQAMHRILHGMDDRLIVIIGPCSIHDTKAALEYAGRLVQERERFASELEIVMRVYF EKPRTTVGWKGLINDPHLDNSFKINDGLRTARELLLQINEMGLPAGTEYLDMISPQYIADLISWGAIGARTTESQVHREL ASGLSCPVGFKNGTDGNVKIAVDAIKAASQPHHFLSVTKGGHSAIVSTAGNEDCHVILRGGKAPNYDADSVNAACADIGK AGLAARLMIDASHANSSKKHENQIPVCADIGRQIAAGDERIVGVMVESHLVEGRQDLKEGCPLTYGQSITDACINWDDSV KVLEGLAEAVKARRVARGSGN >Mature_421_residues MMAREAQPNSRKTAGEPGGFFSPRRFASRDDGPIHRFTESPICRIEPPAAPAHAGRRTEPENSSMPPHNTDDVRIRELKE LTPPAHLIREFALGEAVSELIYNARQAMHRILHGMDDRLIVIIGPCSIHDTKAALEYAGRLVQERERFASELEIVMRVYF EKPRTTVGWKGLINDPHLDNSFKINDGLRTARELLLQINEMGLPAGTEYLDMISPQYIADLISWGAIGARTTESQVHREL ASGLSCPVGFKNGTDGNVKIAVDAIKAASQPHHFLSVTKGGHSAIVSTAGNEDCHVILRGGKAPNYDADSVNAACADIGK AGLAARLMIDASHANSSKKHENQIPVCADIGRQIAAGDERIVGVMVESHLVEGRQDLKEGCPLTYGQSITDACINWDDSV KVLEGLAEAVKARRVARGSGN
Specific function: Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP) [H]
COG id: COG0722
COG function: function code E; 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I DAHP synthase family [H]
Homologues:
Organism=Escherichia coli, GI1786969, Length=347, Percent_Identity=67.4351585014409, Blast_Score=489, Evalue=1e-139, Organism=Escherichia coli, GI1787996, Length=344, Percent_Identity=55.2325581395349, Blast_Score=399, Evalue=1e-112, Organism=Escherichia coli, GI1788953, Length=348, Percent_Identity=48.5632183908046, Blast_Score=338, Evalue=3e-94, Organism=Saccharomyces cerevisiae, GI6320240, Length=372, Percent_Identity=52.4193548387097, Blast_Score=365, Evalue=1e-101, Organism=Saccharomyces cerevisiae, GI6319726, Length=360, Percent_Identity=53.6111111111111, Blast_Score=352, Evalue=6e-98,
Paralogues:
None
Copy number: 600 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR006218 - InterPro: IPR006219 [H]
Pfam domain/function: PF00793 DAHP_synth_1 [H]
EC number: =2.5.1.54 [H]
Molecular weight: Translated: 45779; Mature: 45779
Theoretical pI: Translated: 6.72; Mature: 6.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMAREAQPNSRKTAGEPGGFFSPRRFASRDDGPIHRFTESPICRIEPPAAPAHAGRRTEP CCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCHHCCCCCCEEECCCCCCCCCCCCCCC ENSSMPPHNTDDVRIRELKELTPPAHLIREFALGEAVSELIYNARQAMHRILHGMDDRLI CCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE VIIGPCSIHDTKAALEYAGRLVQERERFASELEIVMRVYFEKPRTTVGWKGLINDPHLDN EEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC SFKINDGLRTARELLLQINEMGLPAGTEYLDMISPQYIADLISWGAIGARTTESQVHREL CEEECHHHHHHHHHHHHHHHCCCCCCCHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHH ASGLSCPVGFKNGTDGNVKIAVDAIKAASQPHHFLSVTKGGHSAIVSTAGNEDCHVILRG HCCCCCCCCCCCCCCCCEEEEEEHHHHCCCCCCEEEEECCCCEEEEECCCCCCEEEEEEC GKAPNYDADSVNAACADIGKAGLAARLMIDASHANSSKKHENQIPVCADIGRQIAAGDER CCCCCCCCCHHHHHHHHHHHHCCEEEEEEECCCCCCCCHHCCCCCHHHHHHHHHHCCCCC IVGVMVESHLVEGRQDLKEGCPLTYGQSITDACINWDDSVKVLEGLAEAVKARRVARGSG EEHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCC N C >Mature Secondary Structure MMAREAQPNSRKTAGEPGGFFSPRRFASRDDGPIHRFTESPICRIEPPAAPAHAGRRTEP CCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCHHCCCCCCEEECCCCCCCCCCCCCCC ENSSMPPHNTDDVRIRELKELTPPAHLIREFALGEAVSELIYNARQAMHRILHGMDDRLI CCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE VIIGPCSIHDTKAALEYAGRLVQERERFASELEIVMRVYFEKPRTTVGWKGLINDPHLDN EEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC SFKINDGLRTARELLLQINEMGLPAGTEYLDMISPQYIADLISWGAIGARTTESQVHREL CEEECHHHHHHHHHHHHHHHCCCCCCCHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHH ASGLSCPVGFKNGTDGNVKIAVDAIKAASQPHHFLSVTKGGHSAIVSTAGNEDCHVILRG HCCCCCCCCCCCCCCCCEEEEEEHHHHCCCCCCEEEEECCCCEEEEECCCCCCEEEEEEC GKAPNYDADSVNAACADIGKAGLAARLMIDASHANSSKKHENQIPVCADIGRQIAAGDER CCCCCCCCCHHHHHHHHHHHHCCEEEEEEECCCCCCCCHHCCCCCHHHHHHHHHHCCCCC IVGVMVESHLVEGRQDLKEGCPLTYGQSITDACINWDDSVKVLEGLAEAVKARRVARGSG EEHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCC N C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]