| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is 126453103
Identifier: 126453103
GI number: 126453103
Start: 2120770
End: 2121210
Strand: Reverse
Name: 126453103
Synonym: BURPS1106A_2129
Alternate gene names: NA
Gene position: 2121210-2120770 (Counterclockwise)
Preceding gene: 126454233
Following gene: 126452973
Centisome position: 53.18
GC content: 70.07
Gene sequence:
>441_bases ATGAAGCTTCGAACCTGGTTGTTACTGGGAACCTCGTCCGCGGTGCTCGCCGCGTGCGGCTGGTTCCATGCCGGCCCCGG CGAGCGCGATATCGACGCCGCCGTGCGCCGCGCGCTCGACGCGGAGAATCGCGGAGCGCTGAACTCGATGCTCGGTCAGC CGCTGCCGGTGGCGGCCGACGTCGCTTCGGTCAAGCCGCTCGGCGATTGCACGAAGCTCGCCGAGCGCACGTATTCGTGC AACGTCGCGATCGCCTGGCACGACGCACGCTCCGGCGAAGGCGACGGAGCGCTGCGCACGACGCTCACGTTCACCGAGGA CAACGACGGCGCGTGGCAGACATCGCATGTCGACGCGGCGCTCGCCGCGGGCGTGGCGAAGTCGCTGATCGACCGGATCA GCGGCGCGGTTGCGGCGAGCGGTGCGTCGCAGGCACAGTGA
Upstream 100 bases:
>100_bases CGCATGGCGTCGTCGATAGGCGCACGGCGCGGGCGCGATGCCGCCGCCGGTTACACGTAACCGCGCAAAGCCGCGCGAAA TCATACGAAACCACACGTCA
Downstream 100 bases:
>100_bases GCCCGCGATTGGCGCACGGCATTGGGCGGGCGCGCCGCGCAATCGCGGCGGACGGCTTCGCGCGTCCGCGTGGCCGGCGT CGAAGCGATGCGCGCTGCCT
Product: putative lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 146; Mature: 146
Protein sequence:
>146_residues MKLRTWLLLGTSSAVLAACGWFHAGPGERDIDAAVRRALDAENRGALNSMLGQPLPVAADVASVKPLGDCTKLAERTYSC NVAIAWHDARSGEGDGALRTTLTFTEDNDGAWQTSHVDAALAAGVAKSLIDRISGAVAASGASQAQ
Sequences:
>Translated_146_residues MKLRTWLLLGTSSAVLAACGWFHAGPGERDIDAAVRRALDAENRGALNSMLGQPLPVAADVASVKPLGDCTKLAERTYSC NVAIAWHDARSGEGDGALRTTLTFTEDNDGAWQTSHVDAALAAGVAKSLIDRISGAVAASGASQAQ >Mature_146_residues MKLRTWLLLGTSSAVLAACGWFHAGPGERDIDAAVRRALDAENRGALNSMLGQPLPVAADVASVKPLGDCTKLAERTYSC NVAIAWHDARSGEGDGALRTTLTFTEDNDGAWQTSHVDAALAAGVAKSLIDRISGAVAASGASQAQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15090; Mature: 15090
Theoretical pI: Translated: 5.62; Mature: 5.62
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLRTWLLLGTSSAVLAACGWFHAGPGERDIDAAVRRALDAENRGALNSMLGQPLPVAAD CCCEEEEEECCCHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHCCCCCCCCC VASVKPLGDCTKLAERTYSCNVAIAWHDARSGEGDGALRTTLTFTEDNDGAWQTSHVDAA HHCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCCCCEEEEEEEEEECCCCCEECHHHHHH LAAGVAKSLIDRISGAVAASGASQAQ HHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MKLRTWLLLGTSSAVLAACGWFHAGPGERDIDAAVRRALDAENRGALNSMLGQPLPVAAD CCCEEEEEECCCHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHCCCCCCCCC VASVKPLGDCTKLAERTYSCNVAIAWHDARSGEGDGALRTTLTFTEDNDGAWQTSHVDAA HHCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCCCCEEEEEEEEEECCCCCEECHHHHHH LAAGVAKSLIDRISGAVAASGASQAQ HHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA