| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is 126453070
Identifier: 126453070
GI number: 126453070
Start: 1554765
End: 1555031
Strand: Reverse
Name: 126453070
Synonym: BURPS1106A_1603
Alternate gene names: NA
Gene position: 1555031-1554765 (Counterclockwise)
Preceding gene: 126451965
Following gene: 126453922
Centisome position: 38.99
GC content: 69.29
Gene sequence:
>267_bases ATGGCACGCCCATTCATCGTCCTCGGCGACAAGCACAGCCACGGCGGCACCGTCACGACCGCGGCCGCGGCTTCCGCGAT CCACGGCAAGGGCATCGCGCGCCGCAACGACCGTGTGTCGTGCCCGATCCATGGGCCCAACCACATCGTCGAGGGCGACG ATACGATGATCATCGACAATGAAGGCGTCGCGCGCGACGGCTATCGCACCGCCTGCGGCGCGGTGCTGATCGCGAGCCAG TCGAGCACGGGCGGCGACGCGGCGTGA
Upstream 100 bases:
>100_bases TGGCGATTAGCCGGTAAAATCGGCCCCGCCCGCGCCGAGCGCGGGCCGAAATCGACCCGCTCGACGCACGCCGCCGGGCG CCCAGCAAGGAGACCACAAC
Downstream 100 bases:
>100_bases CCGAAGCATCGACGGGGAATCGGATGAAGCAGCGCGCGTGGTTGAGCGAGGCGGCCTTCGTGGCCGCGGTTTTCGTCGTC GTGTGGATCGCGACGATCGC
Product: PAAR motif-containing protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 88; Mature: 87
Protein sequence:
>88_residues MARPFIVLGDKHSHGGTVTTAAAASAIHGKGIARRNDRVSCPIHGPNHIVEGDDTMIIDNEGVARDGYRTACGAVLIASQ SSTGGDAA
Sequences:
>Translated_88_residues MARPFIVLGDKHSHGGTVTTAAAASAIHGKGIARRNDRVSCPIHGPNHIVEGDDTMIIDNEGVARDGYRTACGAVLIASQ SSTGGDAA >Mature_87_residues ARPFIVLGDKHSHGGTVTTAAAASAIHGKGIARRNDRVSCPIHGPNHIVEGDDTMIIDNEGVARDGYRTACGAVLIASQS STGGDAA
Specific function: Unknown
COG id: COG4104
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8966; Mature: 8835
Theoretical pI: Translated: 7.05; Mature: 7.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARPFIVLGDKHSHGGTVTTAAAASAIHGKGIARRNDRVSCPIHGPNHIVEGDDTMIIDN CCCCEEEECCCCCCCCEEEEHHHHHCCCCCCCCCCCCEEECCCCCCCEEECCCCEEEECC EGVARDGYRTACGAVLIASQSSTGGDAA CCCCCCCCCCCCCEEEEEECCCCCCCCC >Mature Secondary Structure ARPFIVLGDKHSHGGTVTTAAAASAIHGKGIARRNDRVSCPIHGPNHIVEGDDTMIIDN CCCEEEECCCCCCCCEEEEHHHHHCCCCCCCCCCCCEEECCCCCCCEEECCCCEEEECC EGVARDGYRTACGAVLIASQSSTGGDAA CCCCCCCCCCCCCEEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA