Click here to switch to the map view.

The map label for this gene is fliP [H]

Identifier: 126453057

GI number: 126453057

Start: 30889

End: 31719

Strand: Direct

Name: fliP [H]

Synonym: BURPS1106A_0032

Alternate gene names: 126453057

Gene position: 30889-31719 (Clockwise)

Preceding gene: 126452949

Following gene: 126454577

Centisome position: 0.77

GC content: 66.79

Gene sequence:

>831_bases
ATGCCGCGCCTTCGTTTCGTCGCGCCGCGCGCGGATGCCGCCGCGTGCGCGCCTTCCGACAGTCGTTCGATGAAAACCGC
TTGCCTGCGCGGCGCGGCGCGCTGGCTGCCCGCGATCCTGATCGGCCTCGCGCCCGCGCTCGCGTGCGCGCAGGCGGCCG
GGCTGCCGGCGTTCAACTCGGCGCCGGGCCCGAACGGCGGCACGACCTATTCGTTGAGCGTGCAGACGATGCTGCTGCTC
ACGATGCTGTCGTTCCTGCCGGCGATGCTGCTGATGATGACGAGCTTCACGCGGATCATCATCGTGCTGTCGCTGCTGCG
GCAGGCGATCGGCACCGCGTCGACGCCGCCGAATCAGGTGCTCGTCGGGCTCGCCCTCTTCCTCACGCTGTTCGTGATGT
CGCCCGTGCTCGACCGCGCGTACAACGACGCGTACAAGCCGTTTTCCGAGGGCACGCTGCAGATGGACCAGGCGGTGCAG
CGCGGCACCGCGCCCTTCAAGGCGTTCATGCTCAAGCAGACGCGCGAGACCGATCTCGCGCTGTTCGCGAAGATCTCGAA
GGCCGCGCCGATGCAGGGGCCGGAGGACGTGCCGCTGTCGCTGCTCGTGCCGGCGTTCGTCACAAGCGAGCTGAAGACGG
GGTTCCAGATCGGCTTCACGATCTTCATCCCGTTTCTCATCATCGACATGGTTGTCGCGAGCGTGCTGATGTCGATGGGG
ATGATGATGGTGTCGCCCGCGACGGTGTCGCTGCCGTTCAAGCTGATGCTGTTCGTGCTCGTCGACGGCTGGCAGTTGCT
GATCGGCTCGCTCGCGCAGAGCTTCACCTAG

Upstream 100 bases:

>100_bases
CCGTTGCCCGAGGGCGCTTCCTTCGGGGCGCGCTTTCGCGACGCCATGCTCGGCGAGGCCGCGAAGCGCTTCAAGCGCGA
CGGCGGCAAGGATCGCTGAC

Downstream 100 bases:

>100_bases
ACCCGGTTGATCGAGGAGAGTCGAGATGACCCCCGAAAACGTGATGACGCTCGCGCATCAGGCGATGTACATCGGCCTGC
TGCTCGCCGCGCCGCTCCTG

Product: flagellar biosynthesis protein FliP

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 276; Mature: 275

Protein sequence:

>276_residues
MPRLRFVAPRADAAACAPSDSRSMKTACLRGAARWLPAILIGLAPALACAQAAGLPAFNSAPGPNGGTTYSLSVQTMLLL
TMLSFLPAMLLMMTSFTRIIIVLSLLRQAIGTASTPPNQVLVGLALFLTLFVMSPVLDRAYNDAYKPFSEGTLQMDQAVQ
RGTAPFKAFMLKQTRETDLALFAKISKAAPMQGPEDVPLSLLVPAFVTSELKTGFQIGFTIFIPFLIIDMVVASVLMSMG
MMMVSPATVSLPFKLMLFVLVDGWQLLIGSLAQSFT

Sequences:

>Translated_276_residues
MPRLRFVAPRADAAACAPSDSRSMKTACLRGAARWLPAILIGLAPALACAQAAGLPAFNSAPGPNGGTTYSLSVQTMLLL
TMLSFLPAMLLMMTSFTRIIIVLSLLRQAIGTASTPPNQVLVGLALFLTLFVMSPVLDRAYNDAYKPFSEGTLQMDQAVQ
RGTAPFKAFMLKQTRETDLALFAKISKAAPMQGPEDVPLSLLVPAFVTSELKTGFQIGFTIFIPFLIIDMVVASVLMSMG
MMMVSPATVSLPFKLMLFVLVDGWQLLIGSLAQSFT
>Mature_275_residues
PRLRFVAPRADAAACAPSDSRSMKTACLRGAARWLPAILIGLAPALACAQAAGLPAFNSAPGPNGGTTYSLSVQTMLLLT
MLSFLPAMLLMMTSFTRIIIVLSLLRQAIGTASTPPNQVLVGLALFLTLFVMSPVLDRAYNDAYKPFSEGTLQMDQAVQR
GTAPFKAFMLKQTRETDLALFAKISKAAPMQGPEDVPLSLLVPAFVTSELKTGFQIGFTIFIPFLIIDMVVASVLMSMGM
MMVSPATVSLPFKLMLFVLVDGWQLLIGSLAQSFT

Specific function: Plays a role in the flagellum-specific transport system [H]

COG id: COG1338

COG function: function code NU; Flagellar biosynthesis pathway, component FliP

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein. Bacterial flagellum basal body (By similarity) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliP/mopC/spaP family [H]

Homologues:

Organism=Escherichia coli, GI1788259, Length=237, Percent_Identity=65.8227848101266, Blast_Score=318, Evalue=3e-88,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005837
- InterPro:   IPR005838 [H]

Pfam domain/function: PF00813 FliP [H]

EC number: NA

Molecular weight: Translated: 29575; Mature: 29444

Theoretical pI: Translated: 9.92; Mature: 9.92

Prosite motif: PS01060 FLIP_1 ; PS01061 FLIP_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
6.5 %Met     (Translated Protein)
7.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
6.2 %Met     (Mature Protein)
7.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRLRFVAPRADAAACAPSDSRSMKTACLRGAARWLPAILIGLAPALACAQAAGLPAFNS
CCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
APGPNGGTTYSLSVQTMLLLTMLSFLPAMLLMMTSFTRIIIVLSLLRQAIGTASTPPNQV
CCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
LVGLALFLTLFVMSPVLDRAYNDAYKPFSEGTLQMDQAVQRGTAPFKAFMLKQTRETDLA
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
LFAKISKAAPMQGPEDVPLSLLVPAFVTSELKTGFQIGFTIFIPFLIIDMVVASVLMSMG
HHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
MMMVSPATVSLPFKLMLFVLVDGWQLLIGSLAQSFT
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
PRLRFVAPRADAAACAPSDSRSMKTACLRGAARWLPAILIGLAPALACAQAAGLPAFNS
CCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
APGPNGGTTYSLSVQTMLLLTMLSFLPAMLLMMTSFTRIIIVLSLLRQAIGTASTPPNQV
CCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
LVGLALFLTLFVMSPVLDRAYNDAYKPFSEGTLQMDQAVQRGTAPFKAFMLKQTRETDLA
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
LFAKISKAAPMQGPEDVPLSLLVPAFVTSELKTGFQIGFTIFIPFLIIDMVVASVLMSMG
HHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
MMMVSPATVSLPFKLMLFVLVDGWQLLIGSLAQSFT
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]