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The map label for this gene is ykgB [H]

Identifier: 126453030

GI number: 126453030

Start: 1169509

End: 1170684

Strand: Direct

Name: ykgB [H]

Synonym: BURPS1106A_1191

Alternate gene names: 126453030

Gene position: 1169509-1170684 (Clockwise)

Preceding gene: 126451613

Following gene: 126453781

Centisome position: 29.32

GC content: 69.05

Gene sequence:

>1176_bases
ATGAAAGGTTTCGCGCTCGCGCTGCCGCTTTTCGGCAATCCCGCCTTCGCGCAGGACGCAAGCGCCGGCCCCGCGGGCGG
CGTGTACAACCTGCTCGTCGGCACCTACACGGGCTCGGGCAGCGACGGCCTCTACGTGTATCGCTTCGATACCGACTCGG
GCCGGGTGAGCCCCGTGTCGTCGGCGAAGGCCGAGAACCCGTCGTACCTCGTCGCGAGCCGCGACGGCCGCCACGTGTAT
GCGGTCAACGAACTGCCGGGTGACGCGGGCCCGGCGAGCGTGCGCGGCGGCGTCAGCGCGTTCGATTTCGACGCGAAGAC
GGGCGCGCTCAAGTTCGTCAACCGCGTATCGGCGCAAGGGAACGATCCGTGTTACCTGAGCCTGTCGCCGGACGGGCGGT
ATCTCGTCGTGGCGAATTACTCGGTCGCGTCCGATCCGGGCGGCAGCTTCTCGGTGTTCCCGGTCGAGGCGACGGGCGCG
CTCGGCGCCGCGGTGCTGAACGTGCATCACGAGGGCACGGGCCCGGTGAAGGGGCGGCAGGACGGCGCGCACGTCCATTC
GACCGTGTTCTCGCCGGACGGCAAGTACCTGTTCGTGCAGGATCTCGGCGCGGACAAGCTCTATTCGTACCGCTACACGC
CGGACGGCAGCCGCGGCCTCATCGGCCCGACCGAGTCGCGCTACACGCTCGCGAAGGCGGGCTCGGGCCCGCGCCATCTG
GTGTTCGGCGCAAACGGGCGGTTCGCGTACGTGACCAACGAGCTGAACGCGTCGGTCGACGTGTATCGCTACGACGACGG
CCGGCTCGCGCACATCGAGACCGTGCCGATGACGGCGCCGGGCTTCGCGGGCAAGGTGGGCGGCGGCGCGCTGCATCTGT
CGCCGGACGGGCGCTTCCTGTACGCGACCAATCGCGGCGACGCGAACGACATCGTGATCTACGCGGTGAACGCGGCCGAC
GGCAAGCTGACGCTCGTCGGCCGGCAGTCGAGCCTCGGCAAGACGCCGCGCGAGTTCGCGATCGACCCGAGCGGCAAGTG
GCTCATCGTCGGCAACCAGGACAGCGACAGCGTGTTCGTGTTCCGGCGCGACATCGCGAGCGGCCGGCTCGAGCCGAATC
CGGCGCGGATCAGGATCGACAAGCCGGTCGATTTCAAATTCGTGCCGGTGCAGTGA

Upstream 100 bases:

>100_bases
CATCACAACACTTGAGACGGATCGATGCAAGGAGGTTCCGATGACCCGACGCGCTCACGCGCCTTCGCCGTTCGCTTTCC
CCCTCAGGCTGAGCCACTGG

Downstream 100 bases:

>100_bases
CGCCGGGCGGCGTGCGGCGCGCGTGAGCAACGATGCGCGGCCGGCACGGCCGATCGGCGCGGGCAAGGACGAGGACGAGG
GCGAGGGCGAGGGCGAGGAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 391; Mature: 391

Protein sequence:

>391_residues
MKGFALALPLFGNPAFAQDASAGPAGGVYNLLVGTYTGSGSDGLYVYRFDTDSGRVSPVSSAKAENPSYLVASRDGRHVY
AVNELPGDAGPASVRGGVSAFDFDAKTGALKFVNRVSAQGNDPCYLSLSPDGRYLVVANYSVASDPGGSFSVFPVEATGA
LGAAVLNVHHEGTGPVKGRQDGAHVHSTVFSPDGKYLFVQDLGADKLYSYRYTPDGSRGLIGPTESRYTLAKAGSGPRHL
VFGANGRFAYVTNELNASVDVYRYDDGRLAHIETVPMTAPGFAGKVGGGALHLSPDGRFLYATNRGDANDIVIYAVNAAD
GKLTLVGRQSSLGKTPREFAIDPSGKWLIVGNQDSDSVFVFRRDIASGRLEPNPARIRIDKPVDFKFVPVQ

Sequences:

>Translated_391_residues
MKGFALALPLFGNPAFAQDASAGPAGGVYNLLVGTYTGSGSDGLYVYRFDTDSGRVSPVSSAKAENPSYLVASRDGRHVY
AVNELPGDAGPASVRGGVSAFDFDAKTGALKFVNRVSAQGNDPCYLSLSPDGRYLVVANYSVASDPGGSFSVFPVEATGA
LGAAVLNVHHEGTGPVKGRQDGAHVHSTVFSPDGKYLFVQDLGADKLYSYRYTPDGSRGLIGPTESRYTLAKAGSGPRHL
VFGANGRFAYVTNELNASVDVYRYDDGRLAHIETVPMTAPGFAGKVGGGALHLSPDGRFLYATNRGDANDIVIYAVNAAD
GKLTLVGRQSSLGKTPREFAIDPSGKWLIVGNQDSDSVFVFRRDIASGRLEPNPARIRIDKPVDFKFVPVQ
>Mature_391_residues
MKGFALALPLFGNPAFAQDASAGPAGGVYNLLVGTYTGSGSDGLYVYRFDTDSGRVSPVSSAKAENPSYLVASRDGRHVY
AVNELPGDAGPASVRGGVSAFDFDAKTGALKFVNRVSAQGNDPCYLSLSPDGRYLVVANYSVASDPGGSFSVFPVEATGA
LGAAVLNVHHEGTGPVKGRQDGAHVHSTVFSPDGKYLFVQDLGADKLYSYRYTPDGSRGLIGPTESRYTLAKAGSGPRHL
VFGANGRFAYVTNELNASVDVYRYDDGRLAHIETVPMTAPGFAGKVGGGALHLSPDGRFLYATNRGDANDIVIYAVNAAD
GKLTLVGRQSSLGKTPREFAIDPSGKWLIVGNQDSDSVFVFRRDIASGRLEPNPARIRIDKPVDFKFVPVQ

Specific function: Unknown

COG id: COG2706

COG function: function code G; 3-carboxymuconate cyclase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cycloisomerase 2 family [H]

Homologues:

Organism=Escherichia coli, GI1786983, Length=267, Percent_Identity=32.5842696629214, Blast_Score=112, Evalue=3e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011048
- InterPro:   IPR019405
- InterPro:   IPR015943 [H]

Pfam domain/function: PF10282 DUF2394 [H]

EC number: NA

Molecular weight: Translated: 41269; Mature: 41269

Theoretical pI: Translated: 7.78; Mature: 7.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKGFALALPLFGNPAFAQDASAGPAGGVYNLLVGTYTGSGSDGLYVYRFDTDSGRVSPVS
CCCEEEEEEECCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCEEEEEEECCCCCCCCCC
SAKAENPSYLVASRDGRHVYAVNELPGDAGPASVRGGVSAFDFDAKTGALKFVNRVSAQG
CCCCCCCCEEEEECCCCEEEEEECCCCCCCCCHHCCCCEEEECCCCCCHHHHHHHHCCCC
NDPCYLSLSPDGRYLVVANYSVASDPGGSFSVFPVEATGALGAAVLNVHHEGTGPVKGRQ
CCCEEEEECCCCCEEEEEECEEECCCCCCEEEEEEECCCCCEEEEEEEEECCCCCCCCCC
DGAHVHSTVFSPDGKYLFVQDLGADKLYSYRYTPDGSRGLIGPTESRYTLAKAGSGPRHL
CCCEEEEEEECCCCCEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCEEEEECCCCCEEE
VFGANGRFAYVTNELNASVDVYRYDDGRLAHIETVPMTAPGFAGKVGGGALHLSPDGRFL
EEECCCCEEEEEECCCCEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCEEEECCCCCEE
YATNRGDANDIVIYAVNAADGKLTLVGRQSSLGKTPREFAIDPSGKWLIVGNQDSDSVFV
EEECCCCCCCEEEEEEECCCCEEEEEECCHHCCCCCHHEEECCCCCEEEEECCCCCEEEE
FRRDIASGRLEPNPARIRIDKPVDFKFVPVQ
EEEECCCCCCCCCCCEEEECCCCCEEEEECC
>Mature Secondary Structure
MKGFALALPLFGNPAFAQDASAGPAGGVYNLLVGTYTGSGSDGLYVYRFDTDSGRVSPVS
CCCEEEEEEECCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCEEEEEEECCCCCCCCCC
SAKAENPSYLVASRDGRHVYAVNELPGDAGPASVRGGVSAFDFDAKTGALKFVNRVSAQG
CCCCCCCCEEEEECCCCEEEEEECCCCCCCCCHHCCCCEEEECCCCCCHHHHHHHHCCCC
NDPCYLSLSPDGRYLVVANYSVASDPGGSFSVFPVEATGALGAAVLNVHHEGTGPVKGRQ
CCCEEEEECCCCCEEEEEECEEECCCCCCEEEEEEECCCCCEEEEEEEEECCCCCCCCCC
DGAHVHSTVFSPDGKYLFVQDLGADKLYSYRYTPDGSRGLIGPTESRYTLAKAGSGPRHL
CCCEEEEEEECCCCCEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCEEEEECCCCCEEE
VFGANGRFAYVTNELNASVDVYRYDDGRLAHIETVPMTAPGFAGKVGGGALHLSPDGRFL
EEECCCCEEEEEECCCCEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCEEEECCCCCEE
YATNRGDANDIVIYAVNAADGKLTLVGRQSSLGKTPREFAIDPSGKWLIVGNQDSDSVFV
EEECCCCCCCEEEEEEECCCCEEEEEECCHHCCCCCHHEEECCCCCEEEEECCCCCEEEE
FRRDIASGRLEPNPARIRIDKPVDFKFVPVQ
EEEECCCCCCCCCCCEEEECCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]